BAC Information

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BAC

Clone NameB6Ng01-185K10
Chromosome8 (Build37)
Map Location 38,878,455 - 38,879,379
singlet/doubletsinglet
Overlap geneSgcz
Upstream geneA730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185K10.bB6Ng01-185K10.g
ACCGA010704GA010705
length1,216927
definitionB6Ng01-185K10.b B6Ng01-185K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccacgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagaagaaagtagccaaggagctaaagggatctgcaacc
cttataggtggaacaacatttatgagctaaccagtaccccggagctctga
ctctagctgcatatatatcaaaagatgccctagtcgggccatcactgaag
agagcccattgacttgcaaaccttatatgcccaggtacaggcatgccaag
gtcaacggggatgggccggctaggttaattgcggctgactcctagaacac
gacgtcgctagcaggc
gaattccaaatctataccaggttagtcttcaactcagagatccatgcgag
cctctcatggctcatgagagctttgattaaagatttgagcctccattcct
ggcctgtgccaaggaatttttgatagtatttaaaaaactaaaatcagacc
actgtcttaagagttctgcattgccttagctatcagttactataaaataa
cacttgatggcatttgattaggctaacatgtttatctgggctcacaatgc
agaggattcagtagaaacttctggaggagatacatactttgtttgggact
tagacaatacagtgttactgtagcaggaaaatgtgcagtaactaactgat
ggaatcctcagccagaaaacaagctgaaaacaacaacaaaaaaagacatg
gaaaaatatcccactgtgaaagctgtaatggctcacagtgaatcccatag
tccacccttttgtccacacatctttgcttgcaagtgttcactgcaatgat
ttcttggtctggtatgagttttctggtttctgatattctatcaatacttg
aacttcactgagacccctcttggtatcaagggtagaaagtgggatatgag
gtgaggggaagatgagtgagattgatatacatagtatgaaattcacaaag
aaccaatataaagttcaaacaaacaaacaaacaaacaaaaccccatggtt
tcacaattcccttcaagggcaggcatcaaaaaatgaaggaccactggaaa
accctgcctcttaaaacatcttctatctcctaaaacacaaccacttgacc
aggccttcacccaattctatctctagggacagggaaacctccaggctata
aagcactcatgtttgggaacattttagcaagaataatattatatatatat
atatatatatatatatatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_38878455_38879379
seq2: B6Ng01-185K10.g_67_993 (reverse)

seq1  TATATATATATATATATATATATATATATATATATATAATATTATTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATATATATATATATATATATATATATATATATATATAATATTATTC-TT  49

seq1  GCTAAAATGTT-CCAAACATGAGTGCTTTATAGCCTGGAGGTTT-CCTGT  98
      ||||||||||| |||||||||||||||||||||||||||||||| |||||
seq2  GCTAAAATGTTCCCAAACATGAGTGCTTTATAGCCTGGAGGTTTCCCTGT  99

seq1  CCCTAGAGATAG-ATTGGGTGAAGGCCTGGTCAAGTGGTTGTGTTTTAGG  147
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCCTAGAGATAGAATTGGGTGAAGGCCTGGTCAAGTGGTTGTGTTTTAGG  149

seq1  AGATAGAAGATGTTTTAAGAGGCAGGGTTTTCCAGTGGTCCTTCATTTTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAGATGTTTTAAGAGGCAGGGTTTTCCAGTGGTCCTTCATTTTT  199

seq1  TGATGCCTGCCCTTGAAGGGAATTGTGAAACCATGGGGTTTTGTTTGTTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCTGCCCTTGAAGGGAATTGTGAAACCATGGGGTTTTGTTTGTTT  249

seq1  GTTTGTTTGTTTGAACTTTATATTGGTTCTTTGTGAATTTCATACTATGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTGAACTTTATATTGGTTCTTTGTGAATTTCATACTATGT  299

seq1  ATATCAATCTCACTCATCTTCCCCTCACCTCATATCCCACTTTCTACCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAATCTCACTCATCTTCCCCTCACCTCATATCCCACTTTCTACCCT  349

seq1  TGATACCAAGAGGGGTCTCAGTGAAGTTCAAGTATTGATAGAATATCAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCAAGAGGGGTCTCAGTGAAGTTCAAGTATTGATAGAATATCAGA  399

seq1  AACCAGAAAACTCATACCAGACCAAGAAATCATTGCAGTGAACACTTGCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAAAACTCATACCAGACCAAGAAATCATTGCAGTGAACACTTGCA  449

seq1  AGCAAAGATGTGTGGACAAAAGGGTGGACTATGGGATTCACTGTGAGCCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGATGTGTGGACAAAAGGGTGGACTATGGGATTCACTGTGAGCCA  499

seq1  TTACAGCTTTCACAGTGGGATATTTTTCCATGTCTTTTTTTGTTGTTGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTTTCACAGTGGGATATTTTTCCATGTCTTTTTTTGTTGTTGTT  549

seq1  TTCAGCTTGTTTTCTGGCTGAGGATTCCATCAGTTAGTTACTGCACATTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTGTTTTCTGGCTGAGGATTCCATCAGTTAGTTACTGCACATTT  599

seq1  TCCTGCTACAGTAACACTGTATTGTCTAAGTCCCAAACAAAGTATGTATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTACAGTAACACTGTATTGTCTAAGTCCCAAACAAAGTATGTATC  649

seq1  TCCTCCAGAAGTTTCTACTGAATCCTCTGCATTGTGAGCCCAGATAAACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGAAGTTTCTACTGAATCCTCTGCATTGTGAGCCCAGATAAACA  699

seq1  TGTTAGCCTAATCAAATGCCATCAAGTGTTATTTTATAGTAACTGATAGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGCCTAATCAAATGCCATCAAGTGTTATTTTATAGTAACTGATAGC  749

seq1  TAAGGCAATGCAGAACTCTTAAGACAGTGGTCTGATTTTAGTTTTTTAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAATGCAGAACTCTTAAGACAGTGGTCTGATTTTAGTTTTTTAAA  799

seq1  TACTATCAAAAATTCCTTGGCACAGGCCAGGAATGGAGGCTCAAATCTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCAAAAATTCCTTGGCACAGGCCAGGAATGGAGGCTCAAATCTTT  849

seq1  AATCAAAGCTCTCATGAGCCATGAGAGGCTCGCATGGATCTCTGAGTTGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGCTCTCATGAGCCATGAGAGGCTCGCATGGATCTCTGAGTTGA  899

seq1  AGACTAACCTGGTATAGATTTGGAATTC  925
      ||||||||||||||||||||||||||||
seq2  AGACTAACCTGGTATAGATTTGGAATTC  927