BAC Information

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BAC

Clone NameB6Ng01-186K24
Chromosome8 (Build37)
Map Location 34,756,294 - 34,814,754
singlet/doubletdoublet
Overlap geneGsr
Upstream geneLOC100042715, LOC628408, EG628412, Wrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6
Downstream geneGtf2e2, Rbpms, LOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66, LOC619780, LOC666718, EG234159, LOC666746
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186K24.bB6Ng01-186K24.g
ACCGA011463GA011464
length1,1761,126
definitionB6Ng01-186K24.b B6Ng01-186K24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,813,591 - 34,814,754)(34,756,294 - 34,757,413)
sequence
gaattctcttgtaccagggtaccttctcctgggaaaaggggaaagacttc
agaaacactggttctaaacagacactattccaaggaacacacagtctcac
tgtggagagccagagtaggggcttctggggcatcttgtggtcctcgaggg
tctcggaacccatcccacagatcagagaatagatgagtttagcagctgac
agaactcccatgcatgactaaaggttacgatgggaaagtctatctgtgtt
ctattctgtcaaattacaaaccaaaaccagtactacatgggtaatcccca
ttgcatccccatgcagaagacagatggatcctggggaaatgacagtggtt
tgtcgtagttctaaccacacggtaactctccttgcaagtcttgcaccaga
tatgggagaggatggcatagggaatagtttggaaagctgggtctcctcct
ggtttgggctccacacattcctcttccaataatgcacttggaagcccaag
tcccttaccttacctgcatgtactatatcacacacactctactctgaaca
atgcacctagccacctgatagcaagcaagggcccccacattcatgaagcc
acacaccctgccccctctgtgttctgaatagtggagtaagtatctgctcc
ccttaataaccactaaacttggacagattctagtagaccgtactccatca
cttaggtccatgaagaatagaaaggctaatctgttgaactggttttggat
gcatgtataataaggtgaactgtgtcctcaaagtgacccttcaagggaaa
tcccatttaccaaatatgcctgaccatagtcgggtgtgcatactattata
atcacatacagtatggtaagggacatgcacggtaatagttatataatctg
ccaagcaaaatagagaaccactccaagctatggccctaataacaaaactc
cactgaatttccattaaaaaaaaaaaaacccaaggaataatggggtcatt
taaaattcctttcattcatgagatctgctgttaatctgactgtgttccta
aacctgtactgtcatgttactttaaaaaaaaaaaatactatttacggagc
tgagaagatgactccaatggttaatagcacttgactgcttctccagaaga
gactgagttccttcctaaacaccaac
gaattccaagttcaaaacctgcatgggctaccgagaaaattcaagactag
accctgtctcaaaagagaaaaagcctataatcaccttgggagttagaagg
agttcagaagttcagaatcgtcctcacgcacatagtgaattctaggtctt
gagcgcacatgtgcatccgtgcacacacacacacacacacacacacacac
acacacacacaaaatcctctctcatggaagtcagaagacaatttgtagga
gttggttttctttttccaccatcttgggcctaggaattaaactcaggctg
tcaagaattgacagcaggtcccctcagtcccctcagccatctcaccagcc
cagctctcaccagcccagcttttacattttttaataatttaaggagcact
tcagtgttggagtacttactcagagtgtattaagccctaggttcaatctc
tagtactggaaaactaaaactaaaaaaactgaatatagtaatgtatgctc
ataattcccgcttttacaagactaaggaagattgccataggttcaaagcc
acctgggttacatggtctgtttcaaggcagcctgagttatagtaagtctt
tatatcgaaatacatgcatatgtcagacataatagcacctaactttaatc
ccagcactgggaaagtagaacagagagatctctgaatttgaggccagccg
ggaccacatagcgaattcccaggctgccactagtgagaccttgtctcaga
aaaagaaaagaaaaagccacaaaaaattcagtcaacaagttgaaagggga
agaaggggatggcaaagagcaggtaaattccaatcactatgatgatgacc
atgcaaaatcttcaaaataccaaggaactgtaagcaaggataggttggtt
aagggggagctagaaagggagaaccagctgaaagttcatttacaatgcag
gaaaccccacaaagctccccactctgaaagtctgctcctcttgggcccac
agaaaaagagctgagatttcttgtctgggaaagggcagagaggagctcac
tcattggaagaccagggaggatgagacggccagtcctttacagcttcagc
cagtgagactcgctgctgcccaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_34813591_34814754
seq2: B6Ng01-186K24.b_44_1219 (reverse)

seq1  GTTGGTGTTAGGAAAGGAACTTCG-GTCCTCTGGGGAAGCAGTC-AGTGC  48
      |||||||||  | ||||||||  |  || ||||| ||||||||| |||||
seq2  GTTGGTGTTTAGGAAGGAACTCAGTCTCTTCTGGAGAAGCAGTCAAGTGC  50

seq1  TATTAACCATT-GAGTCATCTCTCCAGCTCCCTAAATAGTA---TTTTTT  94
      ||||||||||| |||||||||   ||||||| |||||||||   ||||||
seq2  TATTAACCATTGGAGTCATCTTCTCAGCTCCGTAAATAGTATTTTTTTTT  100

seq1  TTTAAAGTAACATGACAGTACAGG-TTAGGAACACAGTCAAGATTAACAG  143
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  TTTAAAGTAACATGACAGTACAGGTTTAGGAACACAGTC-AGATTAACAG  149

seq1  CAGATCTCATGAATG-AAGGAA-TTTAAATGACCCCATTATTCCTTGGG-  190
      ||||||||||||||| |||||| |||||||||||||||||||||||||| 
seq2  CAGATCTCATGAATGAAAGGAATTTTAAATGACCCCATTATTCCTTGGGT  199

seq1  -TTTTTTTTTTTAATGG-AATTCAGTGGAGTTTTGTTATTAGGGCCATAG  238
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTAATGGAAATTCAGTGGAGTTTTGTTATTAGGGCCATAG  249

seq1  CTTGG-GTGGTTCTCTATTTTGCTTGGCAGATTATATAACTATTACCGTG  287
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGTGGTTCTCTATTTTGCTTGGCAGATTATATAACTATTACCGTG  299

seq1  CATGTCCCTTACCATACTGTATGTGATTATAATAGTATGCACACCCGACT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCCTTACCATACTGTATGTGATTATAATAGTATGCACACCCGACT  349

seq1  ATGGTCAGGCATATTTGGTAAATGGGATTTCCCTTGAAGGGTCACTTTGA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCAGGCATATTTGGTAAATGGGATTTCCCTTGAAGGGTCACTTTGA  399

seq1  GGACACAGTTCACCTTATTATACATGCATCCAAAACCAGTTCAACAGATT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGTTCACCTTATTATACATGCATCCAAAACCAGTTCAACAGATT  449

seq1  AGCCTTTCTATTCTTCATGGACCTAAGTGATGGAGTACGGTCTACTAGAA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTCTATTCTTCATGGACCTAAGTGATGGAGTACGGTCTACTAGAA  499

seq1  TCTGTCCAAGTTTAGTGGTTATTAAGGGGAGCAGATACTTACTCCACTAT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCAAGTTTAGTGGTTATTAAGGGGAGCAGATACTTACTCCACTAT  549

seq1  TCAGAACACAGAGGGGGCAGGGTGTGTGGCTTCATGAATGTGGGGGCCCT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACACAGAGGGGGCAGGGTGTGTGGCTTCATGAATGTGGGGGCCCT  599

seq1  TGCTTGCTATCAGGTGGCTAGGTGCATTGTTCAGAGTAGAGTGTGTGTGA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCTATCAGGTGGCTAGGTGCATTGTTCAGAGTAGAGTGTGTGTGA  649

seq1  TATAGTACATGCAGGTAAGGTAAGGGACTTGGGCTTCCAAGTGCATTATT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTACATGCAGGTAAGGTAAGGGACTTGGGCTTCCAAGTGCATTATT  699

seq1  GGAAGAGGAATGTGTGGAGCCCAAACCAGGAGGAGACCCAGCTTTCCAAA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGGAATGTGTGGAGCCCAAACCAGGAGGAGACCCAGCTTTCCAAA  749

seq1  CTATTCCCTATGCCATCCTCTCCCATATCTGGTGCAAGACTTGCAAGGAG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCCTATGCCATCCTCTCCCATATCTGGTGCAAGACTTGCAAGGAG  799

seq1  AGTTACCGTGTGGTTAGAACTACGACAAACCACTGTCATTTCCCCAGGAT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCGTGTGGTTAGAACTACGACAAACCACTGTCATTTCCCCAGGAT  849

seq1  CCATCTGTCTTCTGCATGGGGATGCAATGGGGATTACCCATGTAGTACTG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTCTTCTGCATGGGGATGCAATGGGGATTACCCATGTAGTACTG  899

seq1  GTTTTGGTTTGTAATTTGACAGAATAGAACACAGATAGACTTTCCCATCG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGTTTGTAATTTGACAGAATAGAACACAGATAGACTTTCCCATCG  949

seq1  TAACCTTTAGTCATGCATGGGAGTTCTGTCAGCTGCTAAACTCATCTATT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTTAGTCATGCATGGGAGTTCTGTCAGCTGCTAAACTCATCTATT  999

seq1  CTCTGATCTGTGGGATGGGTTCCGAGACCCTCGAGGACCACAAGATGCCC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATCTGTGGGATGGGTTCCGAGACCCTCGAGGACCACAAGATGCCC  1049

seq1  CAGAAGCCCCTACTCTGGCTCTCCACAGTGAGACTGTGTGTTCCTTGGAA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCCCTACTCTGGCTCTCCACAGTGAGACTGTGTGTTCCTTGGAA  1099

seq1  TAGTGTCTGTTTAGAACCAGTGTTTCTGAAGTCTTTCCCCTTTTCCCAGG  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCTGTTTAGAACCAGTGTTTCTGAAGTCTTTCCCCTTTTCCCAGG  1149

seq1  AGAAGGTACCCTGGTACAAGAGAATTC  1164
      |||||||||||||||||||||||||||
seq2  AGAAGGTACCCTGGTACAAGAGAATTC  1176

seq1: chr8_34756294_34757413
seq2: B6Ng01-186K24.g_62_1187

seq1  GAATTCCAAGTTCAAAACCTGCATGGGCTACCGAGAAAATTCAAGACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTTCAAAACCTGCATGGGCTACCGAGAAAATTCAAGACTAG  50

seq1  ACCCTGTCTCAAAAGAGAAAAAGCCTATAATCACCTTGGGAGTTAGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTCAAAAGAGAAAAAGCCTATAATCACCTTGGGAGTTAGAAGG  100

seq1  AGTTCAGAAGTTCAGAATCGTCCTCACGCACATAGTGAATTCTAGGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGAAGTTCAGAATCGTCCTCACGCACATAGTGAATTCTAGGTCTT  150

seq1  GAGCGCACATGTGCATCCGTGCACACACACACACACACACACACACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGCACATGTGCATCCGTGCACACACACACACACACACACACACACAC  200

seq1  ACACACACACAAAATCCTCTCTCATGGAAGTCAGAAGACAATTTGTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACAAAATCCTCTCTCATGGAAGTCAGAAGACAATTTGTAGGA  250

seq1  GTTGGTTTTCTTTTTCCACCATCTTGGGCCTAGGAATTAAACTCAGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTTTCTTTTTCCACCATCTTGGGCCTAGGAATTAAACTCAGGCTG  300

seq1  TCAAGAATTGACAGCAGGTCCCCTCAGTCCCCTCAGCCATCTCACCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAATTGACAGCAGGTCCCCTCAGTCCCCTCAGCCATCTCACCAGCC  350

seq1  CAGCTCTCACCAGCCCAGCTTTTACATTTTTTAATAATTTAAGGAGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTCACCAGCCCAGCTTTTACATTTTTTAATAATTTAAGGAGCACT  400

seq1  TCAGTGTTGGAGTACTTACTCAGAGTGTATTAAGCCCTAGGTTCAATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTGGAGTACTTACTCAGAGTGTATTAAGCCCTAGGTTCAATCTC  450

seq1  TAGTACTGGAAAACTAAAACTAAAAAAACTGAATATAGTAATGTATGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTGGAAAACTAAAACTAAAAAAACTGAATATAGTAATGTATGCTC  500

seq1  ATAATTCCCGCTTTTACAAGACTAAGGAAGATTGCCATAGGTTCAAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCCCGCTTTTACAAGACTAAGGAAGATTGCCATAGGTTCAAAGCC  550

seq1  ACCTGGGTTACATGGTCTGTTTCAAGGCAGCCTGAGTTATAGTAAGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGTTACATGGTCTGTTTCAAGGCAGCCTGAGTTATAGTAAGTCTT  600

seq1  TATATCGAAATACATGCATATGTCAGACATAATAGCACCTAACTTTAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCGAAATACATGCATATGTCAGACATAATAGCACCTAACTTTAATC  650

seq1  CCAGCACTGGGAAAGTAGAACAGAGAGATCTCTGAATTTGAGGCCAGCCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTGGGAAAGTAGAACAGAGAGATCTCTGAATTTGAGGCCAGCCG  700

seq1  GGACCACATAGCGAATTCCCAGGCTGCCACTAGTGAGACCTTGTCTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCACATAGCGAATTCCCAGGCTGCCACTAGTGAGACCTTGTCTCAGA  750

seq1  AAAAGAAAAGAAAAAGCCACAAAAAATTCAGTCAACAAGTTGAAAGGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGAAAAAGCCACAAAAAATTCAGTCAACAAGTTGAAAGGGGA  800

seq1  AGAAGGGGATGGCAAAGAGCAGGTAAATTCCAATCACTATGATGATGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGGATGGCAAAGAGCAGGTAAATTCCAATCACTATGATGATGACC  850

seq1  ATGCAAAATCTTCAAAATACCAAGGAACTGTAAGCAAGGATAGGTTGGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAATCTTCAAAATACCAAGGAACTGTAAGCAAGGATAGGTTGGTT  900

seq1  AAGGGGGAGCTAG-AAGGGAGAACCAGCTGAAAGTTCATTTACAATGCAG  949
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGAGCTAGAAAGGGAGAACCAGCTGAAAGTTCATTTACAATGCAG  950

seq1  GAAACCCCACAAAGCT-CCCACTCTGAAAGTCTGCTCCTCTT-GGCCCAC  997
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  GAAACCCCACAAAGCTCCCCACTCTGAAAGTCTGCTCCTCTTGGGCCCAC  1000

seq1  AG-AAAAGAGCTGAGATTTCTTGTCTGG--AAAGGCAGAAGGAGAGCTCA  1044
      || |||||||||||||||||||||||||  || ||||| ||  |||||||
seq2  AGAAAAAGAGCTGAGATTTCTTGTCTGGGAAAGGGCAG-AGAGGAGCTCA  1049

seq1  CTCAATTGGAGA-CAGGGAGGATGAGACGGCCCAGCCTTTACAGC-TCAG  1092
      |||| | | ||| |||||||||||||||||||   |||||||||| ||||
seq2  CTCATTGGAAGACCAGGGAGGATGAGACGGCCAGTCCTTTACAGCTTCAG  1099

seq1  CCAGTGAAGACTCGCTTGCTG-CCAAGCC  1120
      |||||| |||||||| ||||| |||||||
seq2  CCAGTG-AGACTCGC-TGCTGCCCAAGCC  1126