BAC Information

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BAC

Clone NameB6Ng01-187A23
Chromosome8 (Build37)
Map Location 61,158,993 - 61,269,778
singlet/doubletdoublet
Overlap gene4930431L04Rik
Upstream geneLOC100040711
Downstream geneBC030500, LOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187A23.bB6Ng01-187A23.g
ACCGA011739GA011740
length1,0201,179
definitionB6Ng01-187A23.b B6Ng01-187A23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,158,993 - 61,160,007)(61,268,592 - 61,269,778)
sequence
gaattctatgttttagatgattattctccatgcatatacaaaaaattgct
tttgtgttaattaggaatatttattgtccctgcatttagaccaaaaacca
tcttaatacagtccacatattaatttgcatttgtcttttgccctagagtc
cacatgatgtggtattagtttttatttgcataaagaaaaaaatttctgtt
taattaactgagaagggttgagaaattttgcaaaggaaattaactccttc
attcttattcactagacatcagaatgctacaaatagagtccttacaaact
caaataagacagaatttcttaacccttcatgtgtatctctgtcacatgta
tttgtctaaagcatggtgacataatgtgtaagaatattgattaaaatagc
tattttattaatttctaataataaggtttttttcatcaaagaatgtaact
tttactttcttattctggttcagaaaacatatgaaatcactgattaggaa
gaacatcttaggcaaatcaatgcatacatttttaagtatgtactaatgaa
tatgcacttaccagtacataatgcatatatttatagtatatatgcacaca
caaaagaatatttagatgtgttctactgacttgtttctacataaaattat
ttttattagatattttctttatttgcatttcaaatgatatcccctttcct
agtttcccctctgaaaatcccctatccttcccccctccccctgctcccca
ggcacccactcccactccctggccttggcattgccctacactggggcata
aaaccttcacaggaccaagggcctctcctcccattggtgacaaactaggc
cattctcttctacatatgcagcttagagccatgagtcccaccatgtgttt
ttttctgattggtgggtgaagtcccagggaagctctgagggttctgatta
gttcctggttcaggtagtagtttcagtgattgtaacctatgttcctggga
taaagcaatgcatttgtcca

gaattctatagcctttactgctacatggaccaattgtttccccactatag
ctcagagtcacatgccaaacagcactcagaagcttatgaatattttctgc
attaaaaaataacatagtttctccaataagagtttgtctttaaggaaaaa
acctcactgttttaaattgttaacaaacaatatgaacttttcagaagatt
caatattgctctttattaatttagagttaaatttcaaaaaattctcactt
atctattgttgttattgcataaactaatagttttgaatgtatattaaaag
gtcttaaagatttcttaacatcataaaagtattgatttctgaaaaattat
accagttgatttcaagaaaacatgaattgtataaactcaggtaatgtttt
cctgaataatcaacctttccttcagatcctgattgttaaaaattgggacg
ttcttacaaaagcagtcatttatttttctctagtccttccctttatttta
attctctctcaccaggtaagtgagttcaaactacagtgtaagttcccaag
ataaacagtgccatgatttttttttaacaagaaattttcagaaataaaga
atacacttaaacacaagttaaaacagaaaaacaaatagatttctgcaatg
tcccatgactggtcggaagaactatcatttttctgtcttattttagttac
tttttgacaactaaacattgactataacttagcaggaagaagcccagtaa
ttattaaacagtcgcatgtctctgaacctgtgaaatagatacacttgtgg
ttaatctgacaggtttttttttcaggtacttcttcctgtcttgcccacat
gccatgaattaataaacctagttattattttagaataaagggccagtttt
acatgtaagattccaaatgcatcaaagatgtcgaggaaaattaattcatt
tttaattgcgtgaaatttaaactcctctatttttagagtgtcatgaaagt
ccaagtgttagaaatttacaaatactgttagggattttctgtatttttct
atccctaggtctcagcccagcaaaattagctgaaatagggagttcttcct
ccttcataccttctgcacaatgtgatacggagttctctggctcttgctta
gtagaattctggacttctgtggttccaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61158993_61160007
seq2: B6Ng01-187A23.b_44_1063

seq1  GAATTCTATGTTTTAGATGATTATTCTCCATGCATATACAAAAAATTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTTTTAGATGATTATTCTCCATGCATATACAAAAAATTGCT  50

seq1  TTTGTGTTAATTAGGAATATTTATTGTCCCTGCATTTAGACCAAAAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTAATTAGGAATATTTATTGTCCCTGCATTTAGACCAAAAACCA  100

seq1  TCTTAATACAGTCCACATATTAATTTGCATTTGTCTTTTGCCCTAGAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATACAGTCCACATATTAATTTGCATTTGTCTTTTGCCCTAGAGTC  150

seq1  CACATGATGTGGTATTAGTTTTTATTTGCATAAAGAAAAAAATTTCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGATGTGGTATTAGTTTTTATTTGCATAAAGAAAAAAATTTCTGTT  200

seq1  TAATTAACTGAGAAGGGTTGAGAAATTTTGCAAAGGAAATTAACTCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACTGAGAAGGGTTGAGAAATTTTGCAAAGGAAATTAACTCCTTC  250

seq1  ATTCTTATTCACTAGACATCAGAATGCTACAAATAGAGTCCTTACAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATTCACTAGACATCAGAATGCTACAAATAGAGTCCTTACAAACT  300

seq1  CAAATAAGACAGAATTTCTTAACCCTTCATGTGTATCTCTGTCACATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAGACAGAATTTCTTAACCCTTCATGTGTATCTCTGTCACATGTA  350

seq1  TTTGTCTAAAGCATGGTGACATAATGTGTAAGAATATTGATTAAAATAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTAAAGCATGGTGACATAATGTGTAAGAATATTGATTAAAATAGC  400

seq1  TATTTTATTAATTTCTAATAATAAGGTTTTTTTCATCAAAGAATGTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTAATTTCTAATAATAAGGTTTTTTTCATCAAAGAATGTAACT  450

seq1  TTTACTTTCTTATTCTGGTTCAGAAAACATATGAAATCACTGATTAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTCTTATTCTGGTTCAGAAAACATATGAAATCACTGATTAGGAA  500

seq1  GAACATCTTAGGCAAATCAATGCATACATTTTTAAGTATGTACTAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCTTAGGCAAATCAATGCATACATTTTTAAGTATGTACTAATGAA  550

seq1  TATGCACTTACCAGTACATAATGCATATATTTATAGTATATATGCACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACTTACCAGTACATAATGCATATATTTATAGTATATATGCACACA  600

seq1  CAAAAGAATATTTAGATGTGTTCTACTGACTTGTTTCTACATAAAATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAATATTTAGATGTGTTCTACTGACTTGTTTCTACATAAAATTAT  650

seq1  TTTTATTAGATATTTTCTTTATTTGCATTTCAAATGATATCCCCTTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTAGATATTTTCTTTATTTGCATTTCAAATGATATCCCCTTTCCT  700

seq1  AGTTTCCCCTCTGAAAATCCCCTATCCTTCCCCCCTCCCCCTGCTCCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCCCTCTGAAAATCCCCTATCCTTCCCCCCTCCCCCTGCTCCCCA  750

seq1  GGCACCCACTCCCACTCCCTGGCCTTGGCATTGCCCTACACTGGGGCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCACTCCCACTCCCTGGCCTTGGCATTGCCCTACACTGGGGCATA  800

seq1  AAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGGTGACAAACTAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGGTGACAAACTAGGC  850

seq1  CATTCTCTTCTACATATGCAGC-TAGAGCCATGAGTCCCACCATGTG-TT  898
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  CATTCTCTTCTACATATGCAGCTTAGAGCCATGAGTCCCACCATGTGTTT  900

seq1  TTTTCTGATTGGTGGTTG-AGTCCCAGGG-AGCTCTGAGGGTTCTGATTA  946
      ||||||||||||||| || |||||||||| ||||||||||||||||||||
seq2  TTTTCTGATTGGTGGGTGAAGTCCCAGGGAAGCTCTGAGGGTTCTGATTA  950

seq1  G-TCCTGGTTCAGTAAGTTAGTTTTAGTGATTGT-ACCTATGTTCCTGGG  994
      | |||||||||||  || |||||| ||||||||| |||||||||||||||
seq2  GTTCCTGGTTCAGGTAG-TAGTTTCAGTGATTGTAACCTATGTTCCTGGG  999

seq1  ATAAAGCAATGCATTTGTCCA  1015
      |||||||||||||||||||||
seq2  ATAAAGCAATGCATTTGTCCA  1020


seq1: chr8_61268592_61269778
seq2: B6Ng01-187A23.g_67_1245 (reverse)

seq1  GTTGGA---CCAGAAGT-CAGAATTCTTAACTAAAGGCAAAGAG-CAGAG  45
      ||||||    ||||||| |||||||||  |||||  || ||||| |||| 
seq2  GTTGGAACCACAGAAGTCCAGAATTCT--ACTAA--GC-AAGAGCCAGA-  44

seq1  GAACTCCGTATTCACCAATTGTTGCAG-AGGTATGAAGGGAGGGAAGGAA  94
      |||||||||| ||||  |||| ||||| ||||||||| |||||  | |||
seq2  GAACTCCGTA-TCAC--ATTG-TGCAGAAGGTATGAA-GGAGG--AAGAA  87

seq1  CT-CCTATTTCAAGCTAAATTTTGCCTTGGGCTGAGACCTAGGGATAGAA  143
      || |||||||| |||| ||||||||  |||||||||||||||||||||||
seq2  CTCCCTATTTC-AGCT-AATTTTGC--TGGGCTGAGACCTAGGGATAGAA  133

seq1  AAATACAGAAAAATCCTAACAGTATTTGTAAATTTCTAACACTTGGACTT  193
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  AAATACAGAAAATCCCTAACAGTATTTGTAAATTTCTAACACTTGGACTT  183

seq1  TCATGACACTCTAAAAATAGAGGAGTTTAAATTTCACGCAATTAAAAATG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACACTCTAAAAATAGAGGAGTTTAAATTTCACGCAATTAAAAATG  233

seq1  AATTAATTTTCCTCGACATCTTTGATGCATTTGGAATCTTACATGTAAAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTTTCCTCGACATCTTTGATGCATTTGGAATCTTACATGTAAAA  283

seq1  CTGG-CCTTTATTCTAAAATAATAACTAGGTTTATTAATTCATGGCATGT  342
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCTTTATTCTAAAATAATAACTAGGTTTATTAATTCATGGCATGT  333

seq1  -GGCAAGACAGGAAGAAGTACCTGAAAAAAAAACCTGTCAGATTAACCAC  391
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGACAGGAAGAAGTACCTGAAAAAAAAACCTGTCAGATTAACCAC  383

seq1  AAGTGTATCTATTTCACAGGTTCAGAGACATGCGACTGTTTAATAATTAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTATCTATTTCACAGGTTCAGAGACATGCGACTGTTTAATAATTAC  433

seq1  TGGGCTTCTTCCTGCTAAGTTATAGTCAATGTTTAGTTGTCAAAAAGTAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTCTTCCTGCTAAGTTATAGTCAATGTTTAGTTGTCAAAAAGTAA  483

seq1  CTAAAATAAGACAGAAAAATGATAGTTCTTCCGACCAGTCATGGGACATT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATAAGACAGAAAAATGATAGTTCTTCCGACCAGTCATGGGACATT  533

seq1  GCAGAAATCTATTTGTTTTTCTGTTTTAACTTGTGTTTAAGTGTATTCTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAATCTATTTGTTTTTCTGTTTTAACTTGTGTTTAAGTGTATTCTT  583

seq1  TATTTCTGAAAATTTCTTGTTAAAAAAAAATCATGGCACTGTTTATCTTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGAAAATTTCTTGTTAAAAAAAAATCATGGCACTGTTTATCTTG  633

seq1  GGAACTTACACTGTAGTTTGAACTCACTTACCTGGTGAGAGAGAATTAAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTACACTGTAGTTTGAACTCACTTACCTGGTGAGAGAGAATTAAA  683

seq1  ATAAAGGGAAGGACTAGAGAAAAATAAATGACTGCTTTTGTAAGAACGTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGGAAGGACTAGAGAAAAATAAATGACTGCTTTTGTAAGAACGTC  733

seq1  CCAATTTTTAACAATCAGGATCTGAAGGAAAGGTTGATTATTCAGGAAAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTTTAACAATCAGGATCTGAAGGAAAGGTTGATTATTCAGGAAAA  783

seq1  CATTACCTGAGTTTATACAATTCATGTTTTCTTGAAATCGACTGGTATAA  841
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CATTACCTGAGTTTATACAATTCATGTTTTCTTGAAATCAACTGGTATAA  833

seq1  TTTTTCAGAAATCAATACTTTTATGATGTTAAGAAATCTTTAAGACCTTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGAAATCAATACTTTTATGATGTTAAGAAATCTTTAAGACCTTT  883

seq1  TAATATACATTCAAAACTATTAGTTTATGCAATAACAACAATAGATAAGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATACATTCAAAACTATTAGTTTATGCAATAACAACAATAGATAAGT  933

seq1  GAGAATTTTTTGAAATTTAACTCTAAATTAATAAAGAGCAATATTGAATC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTTTTGAAATTTAACTCTAAATTAATAAAGAGCAATATTGAATC  983

seq1  TTCTGAAAAGTTCATATTGTTTGTTAACAATTTAAAACAGTGAGGTTTTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAAGTTCATATTGTTTGTTAACAATTTAAAACAGTGAGGTTTTT  1033

seq1  TCCTTAAAGACAAACTCTTATTGGAGAAACTATGTTATTTTTTAATGCAG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAAGACAAACTCTTATTGGAGAAACTATGTTATTTTTTAATGCAG  1083

seq1  AAAATATTCATAAGCTTCTGAGTGCTGTTTGGCATGTGACTCTGAGCTAT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTCATAAGCTTCTGAGTGCTGTTTGGCATGTGACTCTGAGCTAT  1133

seq1  AGTGGGGAAACAATTGGTCCATGTAGCAGTAAAGGCTATAGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGAAACAATTGGTCCATGTAGCAGTAAAGGCTATAGAATTC  1179


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