BAC Information

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BAC

Clone NameB6Ng01-187B21
Chromosome8 (Build37)
Map Location 68,742,905 - 68,894,661
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneLOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187B21.bB6Ng01-187B21.g
ACCGA011779GA011780
length1,1741,112
definitionB6Ng01-187B21.b B6Ng01-187B21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,742,905 - 68,744,089)(68,893,569 - 68,894,661)
sequence
gaattccagaatatccttatttgttaacatagagaaacactgtcttgaaa
agcaaagaaacaaacaaacttcaggaagaatggtgaggaatctattaaac
cttggctaatcaggaaagtaggttctctcctatagcctcaggcaaggaat
cttagtaacctgatcttagtcagtgagtgctgtttcgcactttctgatct
ttatgatggtaaatagtaaattgattacattcttgtcttagttagtgctt
tactgctgtgaataaacaccatgaccaaagcaactcttctaagaacaaca
tttaattgggacgagcttatatgttcagaggttcagtccattatcatcaa
ggtagcacctagataggcctgtcgaaggaggaactgagagttcaacatct
tattgtgaaagtgaacaagaaaaatctggcttccaggcagctaggagagt
cttaaaacccacacccacaataacacactccctccaacagaggcacacct
actccaacaaggccacatcttctaatagagccactccctgggccaagcat
attcaaaccaccacaattcttatatgccaataggatagtggtagttttac
tttaatttacgataaaaataacaatagaaccttaaatacacatgatatca
gaacaaaatgagcacttggaaccagtaacagagtgatattgacataagca
ttggcaactgtactggaaatgtgagagaaaggtaaatagaagtacagtta
gttataaatgagaaaaatctctcttaggttgagagaataatcagaaaatt
ctgtgtccccaattttctaacacttatagcagagggaaaaaaataagaaa
agaaaagaaaagaaagaaaagaaaagaaaagaaaagaaaagaaaagagag
gaaagaaaagaaaagaaaggtcttaaaaagaaagcttaaattaacatgca
taatcctgacccagcatacatctccgtgtgcccctacattacagcctctg
atatgtgaagttcatacagctcattgccaattaatcaataatacattccc
aactgaccaccagatggactcagacttaataacctttcccaccagcataa
cagattgtgattttgtatcattatctagatcagtgacttcagcaaatgga
aaagtcctaccaggaagaactata

gaattcttcagagctcccagagattaagccaccaagaaaagagcaataat
gggctggtctgaggcctctgtcacatatgtagcagagcactgccttgtct
tgcctcagtgggagaggatgcacctaatcctgtagagacttgatgcccca
gggaagggggggggaacactctctcagaggtgaaagtgtgaggggctgct
gtgaaggactttggatgagggtactgagaggagaggcaagatttgtgatg
taaataaataaaataattaaaaaataagtgaggacaaaatgaactctagt
ttattgcagttttgatttatttgttcaagaaacatgaattaatgacccat
acaacacaccaggtactaagaagaatgaacagcatataaagaacttgtgg
tttcaggggaatgtgtataaaatgtgatttatagggcctggtgatgagga
cacgtgcctactatagagtagagcagccatttaaagttcttataggagct
aatacttattctcagtaggagcgatgagaaaagttagaggagttgttcag
aaagagacaagagtgtcgaatgtgcaaggagtagaggtttagctgctcag
aaatgaatggaatatgcagatggttcaggaagacatgtattattagatta
gaaccaaaaatctatctatcatttaggtatctatgtctatcatctattta
ccatcttttatctatttacctaccattgattaattatttagtatctattt
ataactttcctttgttgtgttgagtatcaagctatatacttcccttaata
tgtatagaaagtcatatttcatgtaaataggaaatggtagattattaaac
aatgggttagaaacacagattagttccaccctttttgccttgtaactttt
cataaactagaaaaatttcataaactttgaatccagaatgaaggttattc
agacacagaaagacaagcatggtattgtactcatttaaagtagatattag
ccatggtaatacagaataagcatgcttacggtaccagagattcccaatga
agctaaaccaacatcgaggtctccaatggaaggatgactgaatcttcatt
ttgagaaagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68742905_68744089
seq2: B6Ng01-187B21.b_44_1217

seq1  GAATTCCAGAATATCCTTATTTGTTAACATAGAGAAACACTGTCTTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAATATCCTTATTTGTTAACATAGAGAAACACTGTCTTGAAA  50

seq1  AGCAAAGAAACAAACAAACTTCAGGAAGAATGGTGAGGAATCTATTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGAAACAAACAAACTTCAGGAAGAATGGTGAGGAATCTATTAAAC  100

seq1  CTTGGCTAATCAGGAAAGTAGGTTCTCTCCTATAGCCTCAGGCAAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTAATCAGGAAAGTAGGTTCTCTCCTATAGCCTCAGGCAAGGAAT  150

seq1  CTTAGTAACCTGATCTTAGTCAGTGAGTGCTGTTTCGCACTTTCTGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTAACCTGATCTTAGTCAGTGAGTGCTGTTTCGCACTTTCTGATCT  200

seq1  TTATGATGGTAAATAGTAAATTGATTACATTCTTGTCTTAGTTAGTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGGTAAATAGTAAATTGATTACATTCTTGTCTTAGTTAGTGCTT  250

seq1  TACTGCTGTGAATAAACACCATGACCAAAGCAACTCTTCTAAGAACAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTGAATAAACACCATGACCAAAGCAACTCTTCTAAGAACAACA  300

seq1  TTTAATTGGGACGAGCTTATATGTTCAGAGGTTCAGTCCATTATCATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGGGACGAGCTTATATGTTCAGAGGTTCAGTCCATTATCATCAA  350

seq1  GGTAGCACCTAGATAGGCCTGTCGAAGGAGGAACTGAGAGTTCAACATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCACCTAGATAGGCCTGTCGAAGGAGGAACTGAGAGTTCAACATCT  400

seq1  TATTGTGAAAGTGAACAAGAAAAATCTGGCTTCCAGGCAGCTAGGAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGAAAGTGAACAAGAAAAATCTGGCTTCCAGGCAGCTAGGAGAGT  450

seq1  CTTAAAACCCACACCCACAATAACACACTCCCTCCAACAGAGGCACACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAACCCACACCCACAATAACACACTCCCTCCAACAGAGGCACACCT  500

seq1  ACTCCAACAAGGCCACATCTTCTAATAGAGCCACTCCCTGGGCCAAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAACAAGGCCACATCTTCTAATAGAGCCACTCCCTGGGCCAAGCAT  550

seq1  ATTCAAACCACCACAATTCTTATATGCCAATAGGATAGTGGTAGTTTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAACCACCACAATTCTTATATGCCAATAGGATAGTGGTAGTTTTAC  600

seq1  TTTAATTTACGATAAAAATAACAATAGAACCTTAAATACACATGATATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTACGATAAAAATAACAATAGAACCTTAAATACACATGATATCA  650

seq1  GAACAAAATGAGCACTTGGAACCAGTAACAGAGTGATATTGACATAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAATGAGCACTTGGAACCAGTAACAGAGTGATATTGACATAAGCA  700

seq1  TTGGCAACTGTACTGGAAATGTGAGAGAAAGGTAAATAGAAGTACAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAACTGTACTGGAAATGTGAGAGAAAGGTAAATAGAAGTACAGTTA  750

seq1  GTTATAAATGAGAAAAATCTCTCTTAGGTTGAGAGAATAATCAGAAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAATGAGAAAAATCTCTCTTAGGTTGAGAGAATAATCAGAAAATT  800

seq1  CTGTGTCCCCAATTTTCTAACACTTATAGCAGAGGGAAAAAAATAAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCCCAATTTTCTAACACTTATAGCAGAGGGAAAAAAATAAGAAA  850

seq1  AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAG  900
      |||||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  AGAAAAGAAAAG-AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG-AG  898

seq1  AGGAAAGAAAAGAAAAGAAAGGTCTTAAAAAGAAAGCTTAAATTAACATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAAAAGAAAAGAAAGGTCTTAAAAAGAAAGCTTAAATTAACATG  948

seq1  CATAATCCTGACCCAGCATACATCTCCGTGTGGCCCCTACATTACAGCCT  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATAATCCTGACCCAGCATACATCTCCGTGT-GCCCCTACATTACAGCCT  997

seq1  CTGATTATGTGAAGTTCATTACAGCTCATTGCCAATTAAATCAAATAATA  1050
      |||| ||||||||||||| |||||||||||||||||| |||| |||||| 
seq2  CTGA-TATGTGAAGTTCA-TACAGCTCATTGCCAATT-AATC-AATAAT-  1042

seq1  ACATTCCCAACTGGACCACCAGATGGACTCAGACTTTAATTAACTTTCCC  1100
      |||||||||||| ||||||||||||||||||||| ||||| | |||||||
seq2  ACATTCCCAACT-GACCACCAGATGGACTCAGAC-TTAATAACCTTTCCC  1090

seq1  ACCAGCAT-ACAGATGTGGTTTTTGTTATCATTATCTAGGAATCAGTGGC  1149
      |||||||| ||||||   | ||||| |||||||||||||  ||||||| |
seq2  ACCAGCATAACAGATTGTGATTTTG-TATCATTATCTAG--ATCAGTGAC  1137

seq1  TTTCAGCAAAATGAAAAGCCCTACCAGGA--GACTATA  1185
       |||||||||  |||||| ||||||||||   ||||||
seq2  -TTCAGCAAATGGAAAAGTCCTACCAGGAAGAACTATA  1174


seq1: chr8_68893569_68894661
seq2: B6Ng01-187B21.g_61_1172 (reverse)

seq1  CCCCCTTCTC--AATG-AGATTCAGGCATCC-TCCATTGG-GACCTCGTT  45
      |||| |||||  |||| |||||||| ||||| |||||||| ||||||| |
seq2  CCCCTTTCTCAAAATGAAGATTCAGTCATCCTTCCATTGGAGACCTCGAT  50

seq1  GTT-GCTTAGCTTCTTTGG--ATCTCT-GTACCGT-AGCATGCTTATTCT  90
      ||| | |||||||| ||||  |||||| ||||||| ||||||||||||||
seq2  GTTGGTTTAGCTTCATTGGGAATCTCTGGTACCGTAAGCATGCTTATTCT  100

seq1  GTATTA-CATGGCTAATATCTACTTTTAAATGAGTAC-ATACCATGCTTG  138
      |||||| |||||||||||||||| ||||||||||||| ||||||||||||
seq2  GTATTACCATGGCTAATATCTAC-TTTAAATGAGTACAATACCATGCTTG  149

seq1  TCTTTCTGTGTCTGAATTACC-TCATTCTGGAT--CAAGTTTATGAAA-T  184
      ||||||||||||||||| ||| |||||||||||   |||||||||||| |
seq2  TCTTTCTGTGTCTGAATAACCTTCATTCTGGATTCAAAGTTTATGAAATT  199

seq1  TTTCTAGTTTATG-AAAGTTAC-AGGC-AAAAGGGTGGAACTAATCTGTG  231
      ||||||||||||| |||||||| |||| ||||||||||||||||||||||
seq2  TTTCTAGTTTATGAAAAGTTACAAGGCAAAAAGGGTGGAACTAATCTGTG  249

seq1  TTTCTAACCCCATTGTTTAATAATCTACCATTTCCTATTTACATGAAATA  281
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAA-CCCATTGTTTAATAATCTACCATTTCCTATTTACATGAAATA  298

seq1  TGAC-TTCTATACATATTAAGGGAAGTATATAGCTTGATACTCAACACAA  330
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCTATACATATTAAGGGAAGTATATAGCTTGATACTCAACACAA  348

seq1  CAAAGG-AAGTTATAAATAGATACTAAATAATTAATCAATGGTAGGTAAA  379
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAAGTTATAAATAGATACTAAATAATTAATCAATGGTAGGTAAA  398

seq1  TAGATAAAAGATGGTAAATAGATGATAGACATAGATACCTAAATGATAGA  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAAAGATGGTAAATAGATGATAGACATAGATACCTAAATGATAGA  448

seq1  TAGATTTTTGGTTCTAATCTAATAATACATGTCTTCCTGAACCATCTGCA  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTTGGTTCTAATCTAATAATACATGTCTTCCTGAACCATCTGCA  498

seq1  TATTCCATTCATTTCTGAGCAGCTAAACCTCTACTCCTTGCACATTCGAC  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCATTCATTTCTGAGCAGCTAAACCTCTACTCCTTGCACATTCGAC  548

seq1  ACTCTTGTCTCTTTCTGAACAACTCCTCTAACTTTTCTCATCGCTCCTAC  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGTCTCTTTCTGAACAACTCCTCTAACTTTTCTCATCGCTCCTAC  598

seq1  TGAGAATAAGTATTAGCTCCTATAAGAACTTTAAATGGCTGCTCTACTCT  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATAAGTATTAGCTCCTATAAGAACTTTAAATGGCTGCTCTACTCT  648

seq1  ATAGTAGGCACGTGTCCTCATCACCAGGCCCTATAAATCACATTTTATAC  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGGCACGTGTCCTCATCACCAGGCCCTATAAATCACATTTTATAC  698

seq1  ACATTCCCCTGAAACCACAAGTTCTTTATATGCTGTTCATTCTTCTTAGT  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCCCTGAAACCACAAGTTCTTTATATGCTGTTCATTCTTCTTAGT  748

seq1  ACCTGGTGTGTTGTATGGGTCATTAATTCATGTTTCTTGAACAAATAAAT  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTGTGTTGTATGGGTCATTAATTCATGTTTCTTGAACAAATAAAT  798

seq1  CAAAACTGCAATAAACTAGAGTTCATTTTGTCCTCACTTATTTTTTAATT  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTGCAATAAACTAGAGTTCATTTTGTCCTCACTTATTTTTTAATT  848

seq1  ATTTTATTTATTTACATCACAAATCTTGCCTCTCCTCTCAGTACCCTCAT  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTATTTACATCACAAATCTTGCCTCTCCTCTCAGTACCCTCAT  898

seq1  CCAAAGTCCTTCACAGCAGCCCCTCACACTTTCACCTCTGAGAGAGTGTT  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTCCTTCACAGCAGCCCCTCACACTTTCACCTCTGAGAGAGTGTT  948

seq1  CCCCCCCCCTTCCCTGGGGCATCAAGTCTCTACAGGATTAGGTGCATCCT  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCTTCCCTGGGGCATCAAGTCTCTACAGGATTAGGTGCATCCT  998

seq1  CTCCCACTGAGGCAAGACAAGGCAGTGCTCTGCTACATATGTGACAGAGG  1029
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACTGAGGCAAGACAAGGCAGTGCTCTGCTACATATGTGACAGAGG  1048

seq1  CCTCAGACCAGCCCATTATTGCTCTTTTCTTGGTGGCTTAATCTCTGGGA  1079
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGACCAGCCCATTATTGCTCTTTTCTTGGTGGCTTAATCTCTGGGA  1098

seq1  GCTCTGAAGAATTC  1093
      ||||||||||||||
seq2  GCTCTGAAGAATTC  1112


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