BAC Information

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BAC

Clone NameB6Ng01-187D12
Chromosome8 (Build37)
Map Location 131,010,642 - 131,011,809
singlet/doubletsinglet
Overlap geneNrp1
Upstream genePard3, EG628847
Downstream geneLOC668494, Itgb1, LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187D12.bB6Ng01-187D12.g
ACCGA011853GA011854
length1,1911,204
definitionB6Ng01-187D12.b B6Ng01-187D12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacataattaccgttcaatcctcaagtcccttgggattgggacaa
agtgtttatcccctttgccttcagataccttccaccacttctccaaaaca
ttctgagcagaatatttgttcttggaaaaaaataaacagctatgccatag
gaaagaatgaagcaggaagaaccatggccatccattttaaaccttcagtt
ttaaaaatacctcatggggactgacctcatgacttccctgaaggcacact
tttcaaactctagaaactattggatgcttcaaggtataggtcaagtttaa
tacttaagtcagtgagaagggtagagccctggcatttcactgttgaaaca
gaatgctgcatttagccctagcataaagtccccaactcctcatgccttct
ggatgctttatgataaaacatgctaggatataaggcatacttgaaaatca
ctatgagagttttcactaccataaccagtaaagaagagaggtgcaggtaa
tgcatttgctaattagcacattagtgtgtatgtgtgatattgtacaacat
agagaaaatctttatttgttcatttaaaaaattgtaaagcaaatgtgtaa
ggttttttttttttttaagtaaagctgttagagttgggactatggatcag
ttgataaggggcttcctgtcaagcctaaggacctgaagtcagcccctaga
atacacacacacacacacacacacacacacacacacacacacacacacaa
agctgagtatagtacaagcttgtaggtagataatgggtccctgggactca
ctagccagccaatctagcctacttgtgtaaccctgtttcaaaggagccaa
gtgatatttctgacatgacaccgcagattatcttctaacatccacatgca
catgctcctgcacacttaatgcaaatcttcacacacatgtaaacatacac
aaaacatagcatgcataaaattaaaaacaatcttatggtaatgttgtttg
aaataagatagaactaaagaattcagtcaaatgtgattgctcctgggaag
gaactaaagtaagagtttttcttgtgagaaatgttcttagagaattgtga
gccttggaaacattgttgcaccactgcctccgttttctcttatttagaga
tggccgctgctccctaattttttcaggagagcacccactgt
gaattcagaacttttcagctggggaacgagagtaccagtgagtatagctt
tacgaggtaagcctggccttgaactttctaacgaaattcaagacagtcta
tcagaagtaaagtgggaaatagctttacaaggtatgtttggccttgaact
ttgtctagtgttagaagcccttttgttccttttcacatgtcaacaagtgg
ttaaggcagggcgaattctagacgaaattaaagtcaatctatcagaagta
aagcggggagagagagtaggagcaaagaggaaacatggtgcacaaaataa
gtatacaggcctttccaagggtcttgaacccgaggaaaagttaaggtcag
gtaggaatacctggagagagattagaaggaaaagagggaaaagggaaaag
aagaaagatcaattagcggaggtctctaggagaaggagcctgtgctcatc
gctggatgggctcggggagctagttcttagtagctctgaatcagataaaa
aatttagcttctctgaagaaacagacttggaggaggaaacagctcgttat
gagagagaaaagtgccagccagataaaatgcgagctaatcggtcaaggaa
aaagccaaaagcggctggcaaaggccagcttgctgcttggcctcttggca
gtcggcttcaaggtcatagtgcacctccaccctatgctgagcccccgccc
tgcgtagtgcatcagccctgcgcagagaggcaatggacagagaggcaatg
cacaggctcgttcattccaaaggaggaacaaaggaaaatacaacaggcat
ttccgatctttgaaggagccgagggtgggcgtgtccacgctccggtagcg
tatatacagattaaagagcttgccgagtcggtccgtaactatggagtcag
tgctaatttcactatagcacaagtggaaaggcttgcgaatcacgctatga
ctcctggtgattggcagacggtagtaaaagctgtagcccccagtatggga
atgtatcttgagtgaaagcccttggtggcagactcctgcagacgcaggca
agggcccatgccaccatggaatgggatcagagaacgtggactttggaatt
aacttaacgggtcaaggacaacacggcttgcctaaccgacattatcattg
ggggagcatatggctcggaatacctcaaccgtgtccggtgcgtggttaag
tcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_131010642_131011809
seq2: B6Ng01-187D12.b_44_1234

seq1  GAATTCACATAATTACCGTTCAATCCTCAAGTCCCTTGGGATTGGGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATAATTACCGTTCAATCCTCAAGTCCCTTGGGATTGGGACAA  50

seq1  AGTGTTTATCCCCTTTGCCTTCAGATACCTTCCACCACTTCTCCAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTATCCCCTTTGCCTTCAGATACCTTCCACCACTTCTCCAAAACA  100

seq1  TTCTGAGCAGAATATTTGTTCTTGGAAAAAAATAAACAGCTATGCCATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGCAGAATATTTGTTCTTGGAAAAAAATAAACAGCTATGCCATAG  150

seq1  GAAAGAATGAAGCAGGAAGAACCATGGCCATCCATTTTAAACCTTCAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATGAAGCAGGAAGAACCATGGCCATCCATTTTAAACCTTCAGTT  200

seq1  TTAAAAATACCTCATGGGGACTGACCTCATGACTTCCCTGAAGGCACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATACCTCATGGGGACTGACCTCATGACTTCCCTGAAGGCACACT  250

seq1  TTTCAAACTCTAGAAACTATTGGATGCTTCAAGGTATAGGTCAAGTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACTCTAGAAACTATTGGATGCTTCAAGGTATAGGTCAAGTTTAA  300

seq1  TACTTAAGTCAGTGAGAAGGGTAGAGCCCTGGCATTTCACTGTTGAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAGTCAGTGAGAAGGGTAGAGCCCTGGCATTTCACTGTTGAAACA  350

seq1  GAATGCTGCATTTAGCCCTAGCATAAAGTCCCCAACTCCTCATGCCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTGCATTTAGCCCTAGCATAAAGTCCCCAACTCCTCATGCCTTCT  400

seq1  GGATGCTTTATGATAAAACATGCTAGGATATAAGGCATACTTGAAAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTTTATGATAAAACATGCTAGGATATAAGGCATACTTGAAAATCA  450

seq1  CTATGAGAGTTTTCACTACCATAACCAGTAAAGAAGAGAGGTGCAGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGAGTTTTCACTACCATAACCAGTAAAGAAGAGAGGTGCAGGTAA  500

seq1  TGCATTTGCTAATTAGCACATTAGTGTGTATGTGTGATATTGTACAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGCTAATTAGCACATTAGTGTGTATGTGTGATATTGTACAACAT  550

seq1  AGAGAAAATCTTTATTTGTTCATTTAAAAAATTGTAAAGCAAATGTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAATCTTTATTTGTTCATTTAAAAAATTGTAAAGCAAATGTGTAA  600

seq1  GGTTTTTTTTTTTTTTAAGTAAAGCTGTTAGAGTTGGGACTATGGATCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTTTTTTAAGTAAAGCTGTTAGAGTTGGGACTATGGATCAG  650

seq1  TTGATAAGGGGCTTCCTGTCAAGCCTAAGGACCTGAAGTCAGCCCCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAGGGGCTTCCTGTCAAGCCTAAGGACCTGAAGTCAGCCCCTAGA  700

seq1  ATACACACACACACACACACACACACACACACACACACACACACACACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACACACACACACACACACACACACACACACACACACACAA  750

seq1  AGCTGAGTATAGTACAAGCTTGTAGGTAGATAATGGGTCCCTGGGACTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTATAGTACAAGCTTGTAGGTAGATAATGGGTCCCTGGGACTCA  800

seq1  CTAGCCAGCCAATCTAGCCTACTTGTGTAACCCTGTTTCAAAGGAGCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCAGCCAATCTAGCCTACTTGTGTAACCCTGTTTCAAAGGAGCCAA  850

seq1  GTGATATTTCTGACATGACACCGCAGATTATCTTCTAACATCCACATGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATTTCTGACATGACACCGCAGATTATCTTCTAACATCCACATGCA  900

seq1  CATGCTCCTGCACACTTAATGCAAATCTTCACACACATGTAAACATACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCCTGCACACTTAATGCAAATCTTCACACACATGTAAACATACAC  950

seq1  AAAACATAGCATGCATAAAATT-AAAACAATCTTATGGTAATGTTGTTTG  999
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAACATAGCATGCATAAAATTAAAAACAATCTTATGGTAATGTTGTTTG  1000

seq1  -AATTAGATAG-ACTAA--GATTCAGTCAAATGTGATTGGTCCT-GGAAG  1044
       ||| |||||| |||||   ||||||||||||||||||| |||| |||||
seq2  AAATAAGATAGAACTAAAGAATTCAGTCAAATGTGATTGCTCCTGGGAAG  1050

seq1  GAACTAAAGTAAGAGTTTT--CTGTGAGAAATGT--CTAGAGA--TGTGA  1088
      |||||||||||||||||||   ||||||||||||   ||||||  |||||
seq2  GAACTAAAGTAAGAGTTTTTCTTGTGAGAAATGTTCTTAGAGAATTGTGA  1100

seq1  GC--TTGAAACATTGTTGCA-CACTGCCTCTGTTT--TCTTATTTTGGTA  1133
      ||  | |||||||||||||| ||||||||| ||||  |||||||| |  |
seq2  GCCTTGGAAACATTGTTGCACCACTGCCTCCGTTTTCTCTTATTTAGAGA  1150

seq1  T-GCCGCTGCT--CTTA-TTTTTCAGGAG-GCA-CCACTGT  1168
      | |||||||||  || | ||||||||||| ||| |||||||
seq2  TGGCCGCTGCTCCCTAATTTTTTCAGGAGAGCACCCACTGT  1191