BAC Information

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BAC

Clone NameB6Ng01-187G12
Chromosome8 (Build37)
Map Location 80,085,657 - 80,086,455
singlet/doubletsinglet
Overlap geneAI931714
Upstream geneLOC100039211, LOC384847, Nr3c2, Arhgap10, LOC100039235
Downstream geneTmem34, Ednra, EG622803, Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187G12.bB6Ng01-187G12.g
ACCGA011995GA011996
length803926
definitionB6Ng01-187G12.b B6Ng01-187G12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatcaaattgtaagtggttttgtgctgcttacctttggttgc
agaagtaaatgttcccatgcatgaattaaactctccacaattccttctcc
aaatacacctgcatcgacagtttctgttacaactagggacactctataga
atgatgttttaaagatatatgtaagtaaactgatatgctatttctataaa
gctgtcaaagctgagggaaaagggcaaatatgttatagaaaatctttaaa
attttctaatacatttcatttcatttcattatcttcccctgagtcctgag
atgtccctctcttcctctttagctcctttctcttgctctaggcacagaag
ggttgcgctcccagactttgttcacagcccaagtccttaagagtaattgg
cacccacagctttcctggtccctgcctgaacattaaacatttagcttcta
actctaatacaatatgtgtttttctcctactctggaatggtggtttatgt
ctgtaatcccagaacatggcacatagaggcaagatgctaaggcagaagct
aaaggtaatctttgactacatagttggtttgatgctagcctgggctacat
gaaactgcattaaaaagcaagaacaaaccagggagggaacacatccacag
actctgtcaatgacccttccttctcaaagttaattctctttttcttgttt
ttttattttgttttgttgagacagggttttctctgtgtggccctggttgt
catgggaaagtagtgctatacaccaaggctggcctcaatgtcagagatcc
tga
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcattttctgattttgttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgatttgcttcctttttttctagag
cttttagatgtgtgtcaagctgctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_80085657_80086455
seq2: B6Ng01-187G12.b_47_849 (reverse)

seq1  TCAGGGTCTCTGACATTGAGGCCAGCC-TGGTGTATAGCACTACTT--CC  47
      ||||| ||||||||||||||||||||| ||||||||||||||||||  ||
seq2  TCAGGATCTCTGACATTGAGGCCAGCCTTGGTGTATAGCACTACTTTCCC  50

seq1  ATGACAGCCAGGGCCACACAGAG-AAACCCTGTCTCAACAAAACAAAATA  96
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGACAACCAGGGCCACACAGAGAAAACCCTGTCTCAACAAAACAAAATA  100

seq1  AAAAAACAAGAAAAAGAGAATTAACTTTGAGAAGGAAGGGTCATTGACAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAGAAAAAGAGAATTAACTTTGAGAAGGAAGGGTCATTGACAG  150

seq1  AGTCTGTGGATGTGTTCCCTCCCTGGTTTGTTCTTGCTTTTTAATGCAGT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGGATGTGTTCCCTCCCTGGTTTGTTCTTGCTTTTTAATGCAGT  200

seq1  TTCATGTAGCCCAGGCTAGCATCAAACCAACTATGTAGTCAAAGATTACC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTAGCCCAGGCTAGCATCAAACCAACTATGTAGTCAAAGATTACC  250

seq1  TTTAGCTTCTGCCTTAGCATCTTGCCTCTATGTGCCATGTTCTGGGATTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTTCTGCCTTAGCATCTTGCCTCTATGTGCCATGTTCTGGGATTA  300

seq1  CAGACATAAACCACCATTCCAGAGTAGGAGAAAAACACATATTGTATTAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATAAACCACCATTCCAGAGTAGGAGAAAAACACATATTGTATTAG  350

seq1  AGTTAGAAGCTAAATGTTTAATGTTCAGGCAGGGACCAGGAAAGCTGTGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAAGCTAAATGTTTAATGTTCAGGCAGGGACCAGGAAAGCTGTGG  400

seq1  GTGCCAATTACTCTTAAGGACTTGGGCTGTGAACAAAGTCTGGGAGCGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAATTACTCTTAAGGACTTGGGCTGTGAACAAAGTCTGGGAGCGCA  450

seq1  ACCCTTCTGTGCCTAGAGCAAGAGAAAGGAGCTAAAGAGGAAGAGAGGGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTGTGCCTAGAGCAAGAGAAAGGAGCTAAAGAGGAAGAGAGGGA  500

seq1  CATCTCAGGACTCAGGGGAAGATAATGAAATGAAATGAAATGTATTAGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGGACTCAGGGGAAGATAATGAAATGAAATGAAATGTATTAGAA  550

seq1  AATTTTAAAGATTTTCTATAACATATTTGCCCTTTTCCCTCAGCTTTGAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAAGATTTTCTATAACATATTTGCCCTTTTCCCTCAGCTTTGAC  600

seq1  AGCTTTATAGAAATAGCATATCAGTTTACTTACATATATCTTTAAAACAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATAGAAATAGCATATCAGTTTACTTACATATATCTTTAAAACAT  650

seq1  CATTCTATAGAGTGTCCCTAGTTGTAACAGAAACTGTCGATGCAGGTGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATAGAGTGTCCCTAGTTGTAACAGAAACTGTCGATGCAGGTGTA  700

seq1  TTTGGAGAAGGAATTGTGGAGAGTTTAATTCATGCATGGGAACATTTACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGAAGGAATTGTGGAGAGTTTAATTCATGCATGGGAACATTTACT  750

seq1  TCTGCAACCAAAGGTAAGCAGCACAAAACCACTTACAATTTGATGAAGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAACCAAAGGTAAGCAGCACAAAACCACTTACAATTTGATGAAGAA  800

seq1  TTC  799
      |||
seq2  TTC  803