BAC Information

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BAC

Clone NameB6Ng01-188O20
Chromosome8 (Build37)
Map Location 46,722,027 - 46,723,152
singlet/doubletsinglet
Overlap geneSorbs2
Upstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3
Downstream genePdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37, Lrp2bp, Snx25, 4933411K20Rik, Slc25a4, LOC621269, LOC100039875, LOC667325, Helt, LOC667337, Acsl1, Mlf1ip, Ccdc111, Casp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188O20.bB6Ng01-188O20.g
ACCGA013087GA013088
length1,1881,137
definitionB6Ng01-188O20.b B6Ng01-188O20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtgccccatttttaatggggttatttgaatt
tctggagtccagcttcttgagctctttgtatatattggatattagtcccc
tatcagatttaggattggtaaatgttctttcccaatctgttggtggcctt
tttgtcttattgacactatcttttgccttacagaagctttgcaatttcat
gaggttccatttgtcaattcttgatcttacagcaaagccattgctgttat
gtttaggaatttttcccctgtgcccatatcttcgaggcttttccccactt
tttcctcaataaatttcagtgtctctggtttatgtttagttctttgatcc
acttagacttgagctttgtacaaggagataagaatagatcaatttacatt
cttctacatgataaccgccagttgtgccagcaccatttgttgaaaatgct
gtctttttccactggatggttttagctcccttgtcaaagatcaagtgacc
ataggtgtgtggatttatttctgggtcttcaattctattccattgatcta
cctgtctgttgctgtaccagtaccatgcagtttttatcacaattgctctg
tagtacagcttcaggtcagggatggtgattccaccagaggttcttttatt
gttgagaatagtttttgctatcctaggttttttattattccagataaatt
tgcaaattgccctttctaagtattgaagacttgagtttcaattttgatgg
gtattgcactgaatctgtggattgcttttggcagaatagccattttgact
atattaatcctgccaatccatgagcatgggagatctttccatctcctgag
atcttcttcaatttctttcttcagagacttgaagttcttatcatacagat
cttttcactttccttagagtcacaccaaggtattttctattatttgtgac
tattgtgtagggtgttgtttcctaatttctttctcagccatttatccttg
tgtagagaaggccattgatttgtttgagtgaatttatatccagctactgc
actgaagctgtttatcaggttaggagtctctgggtgcattttaggttact
taatatactaatcgattccgccgtgcagtggtaatttggacttcatcttt
cgatttgattccatgatactccctttgatgtgaggaag
gaattctttgatcagtgggaagttgagttttcaaatgctagtcacccaag
gagtcatgctatgtttgttggccagataaaatattctcccttgctccggg
atgcatcatctagaacgacagtagatttcttggaaatgatttgcttttag
ttagaaatggaaacacttgactttcaagtcaacactcttcttagttcttt
ctgaccttgaaagttccttcggttgggtgacccaaaggatggcacacctg
cctgcatgctgaagcccctccggatcctgtcttacttgtgggtcttttct
gtactgtggacttgcaggacctctcctcacagactggagtagaagccgag
tgcaataaaacactgaggagtgtgggaaccagtagtccacagacagaaca
tcctctaggagtcaagttgatgatcctaatctttgcatttccaacagcta
tgaaaataaatatccgagttccaaagggaggaaacaagagttctgagggc
atgttttttattattattattattatttctttcaaaggaagaaaaaattt
agggtttcaaatgattatgaagtaatacaacattccataataatctacag
cttaagtcaaatgactttaatggatcacagttactgtggagcactagtgg
gtcactgggtcaaaaggatgatggtttttcaaactacaccaggttattta
tgacttagattatcatttgcttttattaaataagaaggtggtatcttctg
tcctgataataaatctaaaaattaatttaaaatgcagtccaaatacttta
tatacaggggaagggaatttttgcataattgagaggaaactgtaatcagt
taggttcgttttatagaattaaagctctggtagaaaggaagtcaagacca
taatcagatttcagaccaccatcttatctgaaaagacatgtttctatgta
aagtcagagacttcaggatgtaccctcagtgcctaagacatggaaactaa
gaaaatcccttttccctaaaccagtataaggtgaaaggatgacctccttg
tttcctttagtaaattcagacgacctctacctccttgcctgttttaattt
ttacttttttctaaattctcagaatgtcactaccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_46722027_46723152
seq2: B6Ng01-188O20.g_68_1204 (reverse)

seq1  TGTGGTAGTGACA-TCTGAGAATTAAAAAAAAATAAAAAATAAAAACA-G  48
      ||||||||||||| |||||||||| | ||||||  |||||| |||||| |
seq2  TGTGGTAGTGACATTCTGAGAATTTAGAAAAAAGTAAAAATTAAAACAGG  50

seq1  CAAAGA-GTAGA-GTCGTCTG-ATTTACTAAA-GAAACAAG--AGTCATC  92
      ||| || ||||| |||||||| |||||||||| ||||||||   ||||||
seq2  CAAGGAGGTAGAGGTCGTCTGAATTTACTAAAGGAAACAAGGAGGTCATC  100

seq1  CCTTTTCAC--TATACCTGTTTAGGGAAAA-GGATTTTCTTAG-TTCCAT  138
      |  ||||||  |||||  |||||||||||| |||||||||||| ||||||
seq2  C--TTTCACCTTATACTGGTTTAGGGAAAAGGGATTTTCTTAGTTTCCAT  148

seq1  GTCTTAGGCACTGAGGGTACATCCTGAAGTCTCTGACTTTACATAGAAAC  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGGCACTGAGGGTACATCCTGAAGTCTCTGACTTTACATAGAAAC  198

seq1  ATGTCTTTTCAGATAAGAT-GTGGTCTGAAATCTGATTATGTTCTTGACT  237
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  ATGTCTTTTCAGATAAGATGGTGGTCTGAAATCTGATTATGGTCTTGACT  248

seq1  TCCTTTCTACCAGAGCTTTAATTCTATAAAACGAACCTAACTGATTACAG  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTACCAGAGCTTTAATTCTATAAAACGAACCTAACTGATTACAG  298

seq1  TTTCCTCTCAATTATGCAAAAATTCCCTTCCCCTGTATATAAAGTATTTG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTCAATTATGCAAAAATTCCCTTCCCCTGTATATAAAGTATTTG  348

seq1  GACTGCATTTTAAATTAATTTTTAGATTTATTATCAGGACAGAAGATACC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCATTTTAAATTAATTTTTAGATTTATTATCAGGACAGAAGATACC  398

seq1  ACCTTCTTATTTAATAAAAGCAAATGATAATCTAAGTCATAAATAACCTG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTATTTAATAAAAGCAAATGATAATCTAAGTCATAAATAACCTG  448

seq1  GTGTAGTTTGAAAAACCATCATCCTTTTGACCCAGTGACCCACTAGTGCT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTTTGAAAAACCATCATCCTTTTGACCCAGTGACCCACTAGTGCT  498

seq1  CCACAGTAACTGTGATCCATTAAAGTCATTTGACTTAAGCTGTAGATTAT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTAACTGTGATCCATTAAAGTCATTTGACTTAAGCTGTAGATTAT  548

seq1  TATGGAATGTTGTATTACTTCATAATCATTTGAAACCCTAAATTTTTTCT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAATGTTGTATTACTTCATAATCATTTGAAACCCTAAATTTTTTCT  598

seq1  TCCTTTGAAAGAAATAATAATAATAATAATAAAAAACATGCCCTCAGAAC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGAAAGAAATAATAATAATAATAATAAAAAACATGCCCTCAGAAC  648

seq1  TCTTGTTTCCTCCCTTTGGAACTCGGATATTTATTTTCATAGCTGTTGGA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTCCTCCCTTTGGAACTCGGATATTTATTTTCATAGCTGTTGGA  698

seq1  AATGCAAAGATTAGGATCATCAACTTGACTCCTAGAGGATGTTCTGTCTG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAAGATTAGGATCATCAACTTGACTCCTAGAGGATGTTCTGTCTG  748

seq1  TGGACTACTGGTTCCCACACTCCTCAGTGTTTTATTGCACTCGGCTTCTA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTACTGGTTCCCACACTCCTCAGTGTTTTATTGCACTCGGCTTCTA  798

seq1  CTCCAGTCTGTGAGGAGAGGTCCTGCAAGTCCACAGTACAGAAAAGACCC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCTGTGAGGAGAGGTCCTGCAAGTCCACAGTACAGAAAAGACCC  848

seq1  ACAAGTAAGACAGGATCCGGAGGGGCTTCAGCATGCAGGCAGGTGTGCCA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAAGACAGGATCCGGAGGGGCTTCAGCATGCAGGCAGGTGTGCCA  898

seq1  TCCTTTGGGTCACCCAACCGAAGGAACTTTCAAGGTCAGAAAGAACTAAG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGGTCACCCAACCGAAGGAACTTTCAAGGTCAGAAAGAACTAAG  948

seq1  AAGAGTGTTGACTTGAAAGTCAAGTGTTTCCATTTCTAACTAAAAGCAAA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGTTGACTTGAAAGTCAAGTGTTTCCATTTCTAACTAAAAGCAAA  998

seq1  TCATTTCCAAGAAATCTACTGTCGTTCTAGATGATGCATCCCGGAGCAAG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCAAGAAATCTACTGTCGTTCTAGATGATGCATCCCGGAGCAAG  1048

seq1  GGAGAATATTTTATCTGGCCAACAAACATAGCATGACTCCTTGGGTGACT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATATTTTATCTGGCCAACAAACATAGCATGACTCCTTGGGTGACT  1098

seq1  AGCATTTGAAAACTCAACTTCCCACTGATCAAAGAATTC  1126
      |||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGAAAACTCAACTTCCCACTGATCAAAGAATTC  1137