BAC Information

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BAC

Clone NameB6Ng01-190F09
Chromosome8 (Build37)
Map Location 30,635,011 - 30,636,051
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042598, Unc5d, LOC100041237
Downstream geneEG628189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190F09.bB6Ng01-190F09.g
ACCGA014116GA014117
length1,2111,186
definitionB6Ng01-190F09.b B6Ng01-190F09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaaacagaatcccccaagaaaataagcaacccaataaaaaaa
agtgaaaaatataaaacagaaatttctcaaaagaaggaacaaacatggac
ttatacacttaaatagtgctcaacacccttagtcatcaggagatttcaag
taaaaactcattaagagtctatgtcactctagtcagaagggccatcatcc
ggaatgcaaatgtcaacaaaagcaggggtgggcatggggaaaagggaacc
tcatacactgttggtgggaatgttagctagtgtagccactttggaactca
aacaatttaaaatagatcaaccccgtgatccaattatactgttcctgggt
gtatacctagcgaactttatatcttactacaaaagtccttccatacccat
gttcattgttgctctattaaaaacatctaggaaatgtactatacctagat
atacatcaacagaagaatggattatgaaactatcacacatatacacagtg
aaatattactcagatataaaataaataaagccatgaaatttacaggagaa
tggttgaacctaacccattgtactaagaggatgcatctaaggattagaaa
gataaattctacacatacttttcaatatatggatcttttgttttgtgtgt
ttaacttagaggataaatggatattaggaaactagattcatgtcattgga
agggctttgcgaatagaacagtgcatttatggaggggagccttcaaaatg
taagtggaagccgggtgtggtagctcatgcctttaatctcagcactcagg
aggcagaggctggtggatttctgagttcgaggccagcctgggctacaaag
tgagctccaggacagccagggctatacagagaaaccctgtctcaaaaaaa
aaaaaaaaatgtaagtggagttaaagtaaaggagatgaatatggaaggtg
gaatgggccaagcaattggtgaaatcaaagattagggaaatgaagagaga
ttttgcaatcttagttgaaacatttaataggagtgatagtggaagtcaca
tgacatgaattatagagactaagtttactgatggtgggtcagaatgatca
gaaacgacgatgagatgggttcaacccgacaatactaatgagacctttag
cgacgtactccactttagcaaacctgatttttaagtggtaagttctacat
catgcctaatt

gaattctttgtttagctctgtacgccattttttcacagggttatttgttt
ttctggagtctaactacttcagttctttgtatatattgaatattagccct
gtatcagatttaggattgataaagatcttttcccaatctgttgtttgcct
tttttgtattattgacagtatcctttgccctacagaagctttaccatttc
atgaggtcccatttgttaattcttgtacttatagtacaagccattggtgt
tctgttcaggcatttttcccttgttcccaaatgtacaaggctcttcccca
ctttctcctctatgagttttggtttctctagttttatctggaggtccttg
atccacttagacttgagctttgtaaaaggagaaaagaatggatcaatttg
gcaccaaggcccccagaggactctccacactgcaggaccagtaatatcag
ctccaaagaatcttagagggtcttgtgccagcagggacagggacaaagga
accccgcctggccagaggctgagattctttctggttggggccagccccac
catcttctgcctgagcccagtggagggcaccaagcccgcccagaggactc
cccatgctgcagggcccctagcatacccaggacctcagggtcactggaga
gcacgtgagccatgagcgacagaagcaactgagcttcttagacaaggtcc
attcatgccttcatcttcagccagaaggtggaactgagacccagactcat
gggcaccttccttgtcataggaaagtctgcctaaagggaaggctctgacc
ccaggactcaggagatggatcagagcttcagacttctggacacctgtcct
gcaagaggagagcttgcctgcagagggtactgtgaccactgggactcagt
gagatttggactcccaggagtgctgacaaaggctaacaaaatcacaggag
gaacaagctccagctagagacagctaggacattaccagatggtgaaagcc
aaatgtgagaatcatatatatgtgatgatgatagatagatgatgatggat
gatggatgatgatgatggattggtcttaaatgtttttatagtattttctg
catttacattcatgctatccaaagttccccatgcctcccccgaactcgtt
accaacactccacgttctttgggcccgtgcgagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_30635011_30636051
seq2: B6Ng01-190F09.b_232_1258

seq1  AGAAGGGCCATCATCCGGAATGCAAATGTCAACAAAAGCAGGGGTGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGCCATCATCCGGAATGCAAATGTCAACAAAAGCAGGGGTGGGCA  50

seq1  TGGGGAAAAGGGAACCTCATACACTGTTGGTGGGAATGTTAGCTAGTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAAAGGGAACCTCATACACTGTTGGTGGGAATGTTAGCTAGTGTA  100

seq1  GCCACTTTGGAACTCAAACAATTTAAAATAGATCAACCCCGTGATCCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTTGGAACTCAAACAATTTAAAATAGATCAACCCCGTGATCCAAT  150

seq1  TATACTGTTCCTGGGTGTATACCTAGCGAACTTTATATCTTACTACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGTTCCTGGGTGTATACCTAGCGAACTTTATATCTTACTACAAAA  200

seq1  GTCCTTCCATACCCATGTTCATTGTTGCTCTATTAAAAACATCTAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCATACCCATGTTCATTGTTGCTCTATTAAAAACATCTAGGAAA  250

seq1  TGTACTATACCTAGATATACATCAACAGAAGAATGGATTATGAAACTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTATACCTAGATATACATCAACAGAAGAATGGATTATGAAACTATC  300

seq1  ACACATATACACAGTGAAATATTACTCAGATATAAAATAAATAAAGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATACACAGTGAAATATTACTCAGATATAAAATAAATAAAGCCAT  350

seq1  GAAATTTACAGGAGAATGGTTGAACCTAACCCATTGTACTAAGAGGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTACAGGAGAATGGTTGAACCTAACCCATTGTACTAAGAGGATGC  400

seq1  ATCTAAGGATTAGAAAGATAAATTCTACACATACTTTTCAATATATGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGGATTAGAAAGATAAATTCTACACATACTTTTCAATATATGGAT  450

seq1  CTTTTGTTTTGTGTGTTTAACTTAGAGGATAAATGGATATTAGGAAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTTGTGTGTTTAACTTAGAGGATAAATGGATATTAGGAAACTA  500

seq1  GATTCATGTCATTGGAAGGGCTTTGCGAATAGAACAGTGCATTTATGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGTCATTGGAAGGGCTTTGCGAATAGAACAGTGCATTTATGGAG  550

seq1  GGGAGCCTTCAAAATGTAAGTGGAAGCCGGGTGTGGTAGCTCATGCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCTTCAAAATGTAAGTGGAAGCCGGGTGTGGTAGCTCATGCCTTT  600

seq1  AATCTCAGCACTCAGGAGGCAGAGGCTGGTGGATTTCTGAGTTCGAGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAGCACTCAGGAGGCAGAGGCTGGTGGATTTCTGAGTTCGAGGCC  650

seq1  AGCCTGGGCTACAAAGTGAGCTCCAGGACAGCCAGGGCTATACAGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGGCTACAAAGTGAGCTCCAGGACAGCCAGGGCTATACAGAGAAA  700

seq1  CCCTGTCTC-AAAAAAAAAAAAAAATGTAAGTGGAGTTAAAGTAAAGGAG  749
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAAAAAAAAAAAAAAAATGTAAGTGGAGTTAAAGTAAAGGAG  750

seq1  ATGAATATGG-AGGTGGAATGGGCCAAGCAATTGGTGAAATCAAAAGATT  798
      |||||||||| ||||||||||||||||||||||||||||||| |||||||
seq2  ATGAATATGGAAGGTGGAATGGGCCAAGCAATTGGTGAAATC-AAAGATT  799

seq1  AGGGAAATGAAGAGAAGATTTTGCAATCTTAGTTGAAACAATTTAATAGG  848
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  AGGGAAATGAAGAG-AGATTTTGCAATCTTAGTTGAAAC-ATTTAATAGG  847

seq1  AGTGGATAGTGGAAGTCACATGACATGAATTAATAGAGAACTAAGGTTTA  898
      ||| ||||||||||||||||||||||||||| |||||| ||||||  || 
seq2  AGT-GATAGTGGAAGTCACATGACATGAATT-ATAGAG-ACTAAG--TTT  892

seq1  ACTGATGGTGGGTCAGAAGGATCCAGAAAGGACGATAGAGAAATGGG-TC  947
      |||||||||||||||||| ||| |||||| ||||||   || ||||| ||
seq2  ACTGATGGTGGGTCAGAATGAT-CAGAAACGACGAT---GAGATGGGTTC  938

seq1  AACCCAAACCAATTACTTATGAAGGACTTTTAGCAGACGTACTCCACTTT  997
      ||||| |  ||| |||| ||||  ||| |||||| |||||||||||||||
seq2  AACCCGA--CAA-TACTAATGA--GACCTTTAGC-GACGTACTCCACTTT  982

seq1  AGCAAACTTACATTTTTTAAAGTGGTAATTT---CATCATG-CTAATT  1041
      ||||||| |  ||||||  ||||||||| ||   ||||||| ||||||
seq2  AGCAAACCT-GATTTTT--AAGTGGTAAGTTCTACATCATGCCTAATT  1027


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