BAC Information

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BAC

Clone NameB6Ng01-191L05
Chromosome8 (Build37)
Map Location 113,119,783 - 113,341,244
singlet/doubletdoublet
Overlap geneHydin, Vac14, BC060632, 2010004A03Rik, Sf3b3
Upstream geneDhodh, Pkd1l3, 2400003C14Rik, 4930566A11Rik, D8Ertd587e, LOC668089, LOC672735, Ap1g1, Phlppl, Marveld3, LOC100041884, Tat, Chst4, Zfp612, Gm1467, Calb2, BC025546, LOC672398
Downstream geneCog4, Fuk, St3gal2, Ddx19a, Ddx19b, Aars, Exosc6, Mrcl, 4930402E16Rik, 9430091E24Rik, Glg1, Rfwd3, LOC547023, Mlkl, Fa2h, Wdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191L05.bB6Ng01-191L05.g
ACCGA015127GA015128
length1,021183
definitionB6Ng01-191L05.b B6Ng01-191L05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,340,234 - 113,341,244)(113,119,783 - 113,119,965)
sequence
gaattctatgtgcactgtcacatatagctgtagtctttgctttttgtttt
ttgagacattttgctatccaccatgtagacaacactggccttgaatttac
aaggatttgcctgtagcccctgaggtgctggggataaagctgtacactac
tacacttggctatctttttactttttaaaaaaccagggcttgtggtgtgt
agcacagtggtaggcttcgtgtctagcatgtgcagagctctaggttagat
tcctaggactgaaaaacaagggtaaagtgggtttgaccctaaaactataa
accagccccccctttctaggacctttaaacaaagttttttgtcctgtttc
tatttctcccttttacaagctttttttgtgacctgggacaaatatgctga
ccttggttactcggaattcagttccctgtgtagaactgttttctggtcct
tgagcctccacagtagggtgtgttacatgacgcctggattcaagccctga
cacacagctttcagatttcccctcagcaccagctcatccaaaaattattt
gccagcaaaaaccaactagcaccaagcatgcagaaaccataggaagcctg
gagatactatgtgaatcaaccaggttttcatttctgagtttttagacatg
aaaatatttgtcacggttaatgttctgtttggctttttttttttctcaga
tataactactagtatttctttttccttttaatgatctcttttattttgcg
tttctcccttgaatctttttccccccttttaaattgtgtatctaagtgtt
ttagtgcagacctgctgcaccattttgttgaagttaaaataccctgtcag
gtcacaagtgcctctaccagtggggcctgtttgaaggccctttccttttc
gaatctctgtttgagggaatcgtgttgctagggcaacagtctttctttgc
tccttcacatttcatcttcatctgttcttgctttctgggtttaggaaatg
gtaaaaccacaaggggaggat
atgctctggctctgtatgttcaaggccaggtcagtcaggactataggaaa
ccttgttaaaggggatgggggctgctggggatgttgctcagtggtagagc
aattgggtagcatgtacaaggctctgagtttaattccaagcatcgcagag
agagtgggggagaggagaggagaggagagaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_113340234_113341244
seq2: B6Ng01-191L05.b_41_1061 (reverse)

seq1  ATCCTCCCCTGCTGCTTCTACCATTTCCTAAACCCAAAAAGCAAGAACAG  50
      ||||||||||  || || |||||||||||||||||| |||||||||||||
seq2  ATCCTCCCCTTGTGGTTTTACCATTTCCTAAACCCAGAAAGCAAGAACAG  50

seq1  ATG-AGATGAGATGTGAAGGAGCAAAG-AAGACTGTTG-CCTAGCACCAC  97
      ||| |||||| |||||||||||||||| |||||||||| ||||||| |||
seq2  ATGAAGATGAAATGTGAAGGAGCAAAGAAAGACTGTTGCCCTAGCAACAC  100

seq1  GGTTCCCTCAAACAGAGATTCGAAA--GGAAGGGCCTTCAAACA-GCCCC  144
      | |||||||||||||||||||||||  | ||||||||||||||| |||||
seq2  GATTCCCTCAAACAGAGATTCGAAAAGGAAAGGGCCTTCAAACAGGCCCC  150

seq1  ACTGGTAGAGGCACTTGTGACCTGACA-GGTA-TTTAGCTTCAAC-AAAT  191
      ||||||||||||||||||||||||||| |||| |||| ||||||| ||||
seq2  ACTGGTAGAGGCACTTGTGACCTGACAGGGTATTTTAACTTCAACAAAAT  200

seq1  GGTGCAGCAGGTCTGCACTAAAACACTTAGATACACAATTTAAAAGGGGG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGCAGGTCTGCACTAAAACACTTAGATACACAATTTAAAAGGGGG  250

seq1  GAAAAAGATTCAAGGGAGAAACGCAAAAT-AAAGAGATCATTAAAAGGAA  290
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAAAAAGATTCAAGGGAGAAACGCAAAATAAAAGAGATCATTAAAAGGAA  300

seq1  AAAGAAATACTAGTAGTTATATCTGAGAAAAAAAAAAAGCCAAACAGAAC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATACTAGTAGTTATATCTGAGAAAAAAAAAAAGCCAAACAGAAC  350

seq1  ATTAACCGTGACAAATATTTTCATGTCTAAAAACTCAGAAATGAAAACCT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCGTGACAAATATTTTCATGTCTAAAAACTCAGAAATGAAAACCT  400

seq1  GGTTGATTCACATAGTATCTCCAGGCTTCCTATGGTTTCTGCATGCTTGG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATTCACATAGTATCTCCAGGCTTCCTATGGTTTCTGCATGCTTGG  450

seq1  TGCTAGTTGGTTTTTGCTGGCAAATAATTTTTGGATGAGCTGGTGCTGAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTTGGTTTTTGCTGGCAAATAATTTTTGGATGAGCTGGTGCTGAG  500

seq1  GGGAAATCTGAAAGCTGTGTGTCAGGGCTTGAATCCAGGCGTCATGTAAC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATCTGAAAGCTGTGTGTCAGGGCTTGAATCCAGGCGTCATGTAAC  550

seq1  ACACCCTACTGTGGAGGCTCAAGGACCAGAAAACAGTTCTACACAGGGAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTACTGTGGAGGCTCAAGGACCAGAAAACAGTTCTACACAGGGAA  600

seq1  CTGAATTCCGAGTAACCAAGGTCAGCATATTTGTCCCAGGTCACAAAAAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTCCGAGTAACCAAGGTCAGCATATTTGTCCCAGGTCACAAAAAA  650

seq1  AGCTTGTAAAAGGGAGAAATAGAAACAGGACAAAAAACTTTGTTTAAAGG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTAAAAGGGAGAAATAGAAACAGGACAAAAAACTTTGTTTAAAGG  700

seq1  TCCTAGAAAGGGGGGGCTGGTTTATAGTTTTAGGGTCAAACCCACTTTAC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGAAAGGGGGGGCTGGTTTATAGTTTTAGGGTCAAACCCACTTTAC  750

seq1  CCTTGTTTTTCAGTCCTAGGAATCTAACCTAGAGCTCTGCACATGCTAGA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTTTTCAGTCCTAGGAATCTAACCTAGAGCTCTGCACATGCTAGA  800

seq1  CACGAAGCCTACCACTGTGCTACACACCACAAGCCCTGGTTTTTTAAAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAAGCCTACCACTGTGCTACACACCACAAGCCCTGGTTTTTTAAAAA  850

seq1  GTAAAAAGATAGCCAAGTGTAGTAGTGTACAGCTTTATCCCCAGCACCTC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAGATAGCCAAGTGTAGTAGTGTACAGCTTTATCCCCAGCACCTC  900

seq1  AGGGGCTACAGGCAAATCCTTGTAAATTCAAGGCCAGTGTTGTCTACATG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTACAGGCAAATCCTTGTAAATTCAAGGCCAGTGTTGTCTACATG  950

seq1  GTGGATAGCAAAATGTCTCAAAAAACAAAAAGCAAAGACTACAGCTATAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATAGCAAAATGTCTCAAAAAACAAAAAGCAAAGACTACAGCTATAT  1000

seq1  GTGACAGTGCACATAGAATTC  1011
      |||||||||||||||||||||
seq2  GTGACAGTGCACATAGAATTC  1021

seq1: chr8_113119783_113119965
seq2: B6Ng01-191L05.g_72_254

seq1  ATGCTCTGGCTCTGTATGTTCAAGGCCAGGTCAGTCAGGACTATAGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTGGCTCTGTATGTTCAAGGCCAGGTCAGTCAGGACTATAGGAAA  50

seq1  CCTTGTTAAAGGGGATGGGGGCTGCTGGGGATGTTGCTCAGTGGTAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTAAAGGGGATGGGGGCTGCTGGGGATGTTGCTCAGTGGTAGAGC  100

seq1  AATTGGGTAGCATGTACAAGGCTCTGAGTTTAATTCCAAGCATCGCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGTAGCATGTACAAGGCTCTGAGTTTAATTCCAAGCATCGCAGAG  150

seq1  AGAGTGGGGGAGAGGAGAGGAGAGGAGAGAAGA  183
      |||||||||||||||||||||||||||||||||
seq2  AGAGTGGGGGAGAGGAGAGGAGAGGAGAGAAGA  183