BAC Information

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BAC

Clone NameB6Ng01-192E14
Chromosome8 (Build37)
Map Location 65,313,647 - 65,455,410
singlet/doubletdoublet
Overlap geneSpock3
Upstream genePalld, BC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
Downstream geneLOC384831, EG244495
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192E14.bB6Ng01-192E14.g
ACCGA015563GA015564
length1,0441,162
definitionB6Ng01-192E14.b B6Ng01-192E14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,313,647 - 65,314,670)(65,454,227 - 65,455,410)
sequence
gaattcttactctttttttttttaattttatgtctctgagtatatttgtg
tgtgaatatgtgactgcagttgtaggtgaggccagagatagttgtagggc
cccttggagctagacttacagagagatatgagctggccaatgtatgtgct
agcaataacacccaggcagtttgtaaaatcagtaagcagtctcaatggtt
gcaccatctcttcaacctataaagcatatattctttatcgttatgttttc
ttctactaattggaaattcttgattagtttttcgtatttgtctttgggaa
attccttgtgttatacccttcatactttggatatgtctcactgtaacagt
acatgtttaattgagatgtcttcttacttcccttcaacaaattttatgca
taaaatcataaaaagtactagggcatgatgatgaaagtgtgagaggaggt
actaataaaaaatcagaggaggtggggagagggaaaggaaaacattcatg
taactataagatatatttttcctgtctttctttttttaattggttatttt
atttatttacatttcaaatgtcccccttcttagtctccactccacaaata
ccccccatttcctatcccctttcatatgactctaagagggtgctccctca
ctcacccacccactcccatttcacccctctagtatcccctttcactggag
catcaagcctccacagggcaaagggcctccccttccattgatgccagata
aagcaatcctctgctacatatgcagctggagccatggacccatccatata
tactctttggttgttgctttagtccttgggagctttgtggggtctagtta
gttgataatattgttcttcctatgtggttgtaataccctttagctccttc
agtccttcccctaacttttccattggagtccagaggctcagtttgatggt
tagcttatagtattctgcaatattgtgttagatgctggtggaggctctca
gagacaggcatactaggctccgtcttcgagccttcttacatcag

gaattcagcccagcagtcaatcagatcaataacttgaagctttgattttc
ctaagatgttaataataaagagcttaaaaggaggactttgagaaacaggt
gccagcatctctaggagcctctgactaatagaatccaagaatccttgaat
aacagatccaaccctgtttgatcagtatcttagaaaacaggacacagaac
tctgccttttcttataaactatctcatgtttctttgtaaactttacaaaa
gatgtttttatgtttttatcttattacagtactatttgtagttcaggaag
ctgaagaaatgtgacaacttcaatatgtaatatttccagtaacggcacca
tgcttctgatgcttcctgtccatttagatgagatagaatcaactttgtga
gaattcagaacaattctactctgcctatctgggatcaataactgcaaatc
atttttctccacataaaatgcaaatatttgctcacataataaatcatttg
ctaatgttgtttgagattgtgtcaaagactaagtatgtgcactcctggtt
ttgaatgctttgaatagaattttaatgtgccactaatgagtagaggctta
atgctaagcacatgttctacatgttaactacatttccagccctcactcta
agtgttaatagacaatctaatatattgaattaattctgccttatataaag
ttagtacacattaaaagttctgtcattcctcatgcctctgcaagaatact
tttcctatggatttatcatgatggtttagaaatgaaaggaaaacaaaaac
ccctcatcctcttaagctgaaatattattaataaaattcagctgtttcaa
taatgatttttaaagattgtgaaatgtgtctcttacaaagtaacattaat
tttttttttttttgatggaagaaaagattgtactttaaatcaaagatctt
aagcaattcctgtgcttggctatgtaggactaaggtaaacatagtaatac
caggatctatttagatactagttaccagtgtcccaaaataatataagcag
tcattgagctatcggatcagcatcataaaacaaacacaacaacaggacaa
ccacacactaatacaaacaccaaaatcacacaaaaatcatacacacacta
aaagccctctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65313647_65314670
seq2: B6Ng01-192E14.b_48_1072

seq1  GAATTCTTACTCTTTTTTTTTTTAATTTTATGTCTCTGAGTATATTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTCTTTTTTTTTTTAATTTTATGTCTCTGAGTATATTTGTG  50

seq1  TGTGAATATGTGACTGCAGTTGTAGGTGAGGCCAGAGATAGTTGTAGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATATGTGACTGCAGTTGTAGGTGAGGCCAGAGATAGTTGTAGGGC  100

seq1  CCCTTGGAGCTAGACTTACAGAGAGATATGAGCTGGCCAATGTATGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGAGCTAGACTTACAGAGAGATATGAGCTGGCCAATGTATGTGCT  150

seq1  AGCAATAACACCCAGGCAGTTTGTAAAATCAGTAAGCAGTCTCAATGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAACACCCAGGCAGTTTGTAAAATCAGTAAGCAGTCTCAATGGTT  200

seq1  GCACCATCTCTTCAACCTATAAAGCATATATTCTTTATCGTTATGTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATCTCTTCAACCTATAAAGCATATATTCTTTATCGTTATGTTTTC  250

seq1  TTCTACTAATTGGAAATTCTTGATTAGTTTTTCGTATTTGTCTTTGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTAATTGGAAATTCTTGATTAGTTTTTCGTATTTGTCTTTGGGAA  300

seq1  ATTCCTTGTGTTATACCCTTCATACTTTGGATATGTCTCACTGTAACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGTGTTATACCCTTCATACTTTGGATATGTCTCACTGTAACAGT  350

seq1  ACATGTTTAATTGAGATGTCTTCTTACTTCCCTTCAACAAATTTTATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTAATTGAGATGTCTTCTTACTTCCCTTCAACAAATTTTATGCA  400

seq1  TAAAATCATAAAAAGTACTAGGGCATGATGATGAAAGTGTGAGAGGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATAAAAAGTACTAGGGCATGATGATGAAAGTGTGAGAGGAGGT  450

seq1  ACTAATAAAAAATCAGAGGAGGTGGGGAGAGGGAAAGGAAAACATTCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAAAAAATCAGAGGAGGTGGGGAGAGGGAAAGGAAAACATTCATG  500

seq1  TAACTATAAGATATATTTTTCCTGTCTTTCTTTTTTTAATTGGTTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATAAGATATATTTTTCCTGTCTTTCTTTTTTTAATTGGTTATTTT  550

seq1  ATTTATTTACATTTCAAATGTCCCCCTTCTTAGTCTCCACTCCACAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTACATTTCAAATGTCCCCCTTCTTAGTCTCCACTCCACAAATA  600

seq1  CCCCCCATTTCCTATCCCCTTTCATATGACTCTAAGAGGGTGCTCCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCATTTCCTATCCCCTTTCATATGACTCTAAGAGGGTGCTCCCTCA  650

seq1  CTCACCCACCCACTCCCATTTCACCCCTCTAGTATCCCCTTTCACTGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCACCCACTCCCATTTCACCCCTCTAGTATCCCCTTTCACTGGAG  700

seq1  CATCAAGCCTCCACAGGGCAAAGGGCCTCCCCTTCCATTGATGCCAGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGCCTCCACAGGGCAAAGGGCCTCCCCTTCCATTGATGCCAGATA  750

seq1  AAGCAATCCTCTGCTACATATGCAGCTGGAGCCATGGACCCATCCATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATCCTCTGCTACATATGCAGCTGGAGCCATGGACCCATCCATATA  800

seq1  TACTCTTTGGTTGTTGCTTTAGTCCTTGGGAGCTTTGTGGGGTCTAGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTTGGTTGTTGCTTTAGTCCTTGGGAGCTTTGTGGGGTCTAGTTA  850

seq1  GTTGATAATATTGTTCTTCCTATGTGGTTGTAATACCCTTTAGCTCCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAATATTGTTCTTCCTATGTGGTTGTAATACCCTTTAGCTCCTTC  900

seq1  AGTCCTTCCCCTAACTTTTCCATTGGAGTCCAGAGGCTCAGTTTGATGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTCCCCTAACTTTTCCATTGGAGTCCAGAGGCTCAGTTTGATGGT  950

seq1  TAGCTATAAGTA-TCTGC-ATA-TGTGTTAGATGCTGGTGGAGCCTCTCA  997
      |||||   |||| ||||| ||| |||||||||||||||||||| ||||||
seq2  TAGCTTATAGTATTCTGCAATATTGTGTTAGATGCTGGTGGAGGCTCTCA  1000

seq1  GAGAACAGCCATACTAGGCTCCCGTCT  1024
      ||| |||| ||||||||||| ||||||
seq2  GAG-ACAGGCATACTAGGCT-CCGTCT  1025


seq1: chr8_65454227_65455410
seq2: B6Ng01-192E14.g_68_1229 (reverse)

seq1  TCAGAGGGTTTTTTGTTGTTGTTGTTTTGTTTTTTTTGTTGTTGTTTTTT  50
      |||||||| |||| |    |||   | || ||||| |||       ||||
seq2  TCAGAGGGCTTTTAG----TGTGTGTATGATTTTTGTGT-----GATTTT  41

seq1  GTTGTTTTGTTTTTTGGTTGTTGTTGTTGTTCTTGTTGTTGTTGTTTTGT  100
      | |||||   ||  ||     ||| |||| || |||||||||   |||||
seq2  GGTGTTTGTATTAGTG-----TGTGGTTG-TCCTGTTGTTGT--GTTTGT  83

seq1  TTTTTAATGATGCTGGATTCGATAGGCTCAAATGACTGCTTATA-TATTT  149
      |||   |||||||| ||| ||||| |||| |||||||||||||| |||||
seq2  TTT---ATGATGCT-GATCCGATA-GCTC-AATGACTGCTTATATTATTT  127

seq1  T-GGACACTTGGTAACTAGTAATCTAAATAGATCCTGGTATTACTATG-T  197
      | |||||| ||||||||||| ||||||||||||||||||||||||||| |
seq2  TGGGACAC-TGGTAACTAGT-ATCTAAATAGATCCTGGTATTACTATGTT  175

seq1  TACCTTAGTCCTTACATAGCCAAGCACAGGAAATTGCTTAAGATCTTTGA  247
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  TACCTTAGTCC-TACATAGCCAAGCACAGG-AATTGCTTAAGATCTTTGA  223

seq1  TTTTAAGTACAATCTTTTCTTCCATC--AAAAAAAAAAAATTAATGTTAC  295
      ||| ||||||||||||||||||||||  ||||||||||||||||||||||
seq2  TTTAAAGTACAATCTTTTCTTCCATCAAAAAAAAAAAAAATTAATGTTAC  273

seq1  TTTGTAAGAGACACATTTCACAATCTTTAAAAATCATTATTGAAACAGCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGAGACACATTTCACAATCTTTAAAAATCATTATTGAAACAGCT  323

seq1  GAATTTTATTAATAATATTTCAGCTTAAGAGGATGAGGGGTTTTTGTTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTATTAATAATATTTCAGCTTAAGAGGATGAGGGGTTTTTGTTTT  373

seq1  CCTTTCATTTCTAAACCATCATGATAAATCCATAGGAAAAGTATTCTTGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCATTTCTAAACCATCATGATAAATCCATAGGAAAAGTATTCTTGC  423

seq1  AGAGGCATGAGGAATGACAGAACTTTTAATGTGTACTAACTTTATATAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCATGAGGAATGACAGAACTTTTAATGTGTACTAACTTTATATAAG  473

seq1  GCAGAATTAATTCAATATATTAGATTGTCTATTAACACTTAGAGTGAGGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATTAATTCAATATATTAGATTGTCTATTAACACTTAGAGTGAGGG  523

seq1  CTGGAAATGTAGTTAACATGTAGAACATGTGCTTAGCATTAAGCCTCTAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATGTAGTTAACATGTAGAACATGTGCTTAGCATTAAGCCTCTAC  573

seq1  TCATTAGTGGCACATTAAAATTCTATTCAAAGCATTCAAAACCAGGAGTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGTGGCACATTAAAATTCTATTCAAAGCATTCAAAACCAGGAGTG  623

seq1  CACATACTTAGTCTTTGACACAATCTCAAACAACATTAGCAAATGATTTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTTAGTCTTTGACACAATCTCAAACAACATTAGCAAATGATTTA  673

seq1  TTATGTGAGCAAATATTTGCATTTTATGTGGAGAAAAATGATTTGCAGTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGAGCAAATATTTGCATTTTATGTGGAGAAAAATGATTTGCAGTT  723

seq1  ATTGATCCCAGATAGGCAGAGTAGAATTGTTCTGAATTCTCACAAAGTTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCCCAGATAGGCAGAGTAGAATTGTTCTGAATTCTCACAAAGTTG  773

seq1  ATTCTATCTCATCTAAATGGACAGGAAGCATCAGAAGCATGGTGCCGTTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATCTCATCTAAATGGACAGGAAGCATCAGAAGCATGGTGCCGTTA  823

seq1  CTGGAAATATTACATATTGAAGTTGTCACATTTCTTCAGCTTCCTGAACT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATATTACATATTGAAGTTGTCACATTTCTTCAGCTTCCTGAACT  873

seq1  ACAAATAGTACTGTAATAAGATAAAAACATAAAAACATCTTTTGTAAAGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGTACTGTAATAAGATAAAAACATAAAAACATCTTTTGTAAAGT  923

seq1  TTACAAAGAAACATGAGATAGTTTATAAGAAAAGGCAGAGTTCTGTGTCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGAAACATGAGATAGTTTATAAGAAAAGGCAGAGTTCTGTGTCC  973

seq1  TGTTTTCTAAGATACTGATCAAACAGGGTTGGATCTGTTATTCAAGGATT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTAAGATACTGATCAAACAGGGTTGGATCTGTTATTCAAGGATT  1023

seq1  CTTGGATTCTATTAGTCAGAGGCTCCTAGAGATGCTGGCACCTGTTTCTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATTCTATTAGTCAGAGGCTCCTAGAGATGCTGGCACCTGTTTCTC  1073

seq1  AAAGTCCTCCTTTTAAGCTCTTTATTATTAACATCTTAGGAAAATCAAAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTCCTTTTAAGCTCTTTATTATTAACATCTTAGGAAAATCAAAG  1123

seq1  CTTCAAGTTATTGATCTGATTGACTGCTGGGCTGAATTC  1184
      |||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTTATTGATCTGATTGACTGCTGGGCTGAATTC  1162


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