BAC Information

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BAC

Clone NameB6Ng01-192G17
Chromosome8 (Build37)
Map Location 99,947,216 - 100,017,431
singlet/doubletdoublet
Overlap geneLOC546090
Upstream geneLOC333331
Downstream geneLOC636859, EG384885, LOC100041173, EG636915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192G17.bB6Ng01-192G17.g
ACCGA015664GA015665
length1,168988
definitionB6Ng01-192G17.b B6Ng01-192G17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,947,216 - 99,948,395)(100,016,445 - 100,017,431)
sequence
gaattcttgtcttcacgctgctaagcaattttaaagctggtttctgcccc
tctgatgtgataaatctctttaatagagtatattctctccactgttcttt
gaatgacacaggaagtaataagaataccataaatcacatggtggtggtta
ttccaatactcagcctaggtagaatgtgaaaacacttcagaaaagagcca
tgcacaattctgacataaacttcttgtatagaatgtgaaaatgactttgt
tacgtgtatggtttttttgtttgtttgtttgttttgttttgttttgtttt
ttatttttattttttttaatctcgtgggactcagtttaaccccatctttc
tcaaagatatttacaaattctaggaaatagaatctttggaaaggagttat
gcttccatttctaaataacggaataaaatttgaattttctattgtgtaga
aacttcttaagagcctgcctaagaattgctttgaaaaattcctgaaaaaa
aaatatgaatctgacctaagtgcccaaagttttgaaaatcctttatagcc
ctttcttctttccacttaataacttgtttatataaaatataaagaccttt
tgagacagaatttatctggattgctttaatttctcatcatcagcaaagat
tgaaatagttttctgattcccaaacctgagactatttttatgcaacaatg
ctatataaactgtccaagtagtctgagatgttttctctggcacatgttcc
cctctccccctcaaccctgtctttttcactgagcatcctaagctaatttc
aaagtgcatcatcctctagtcatagtctcttcattgctgggatttgagac
aggtatcaaccacccagctagcaacacactcttggaatgtcgaatctttc
tctgtggagaaacacctcacatttcaagcagatatccagcgtagttgcta
attataaaaaaataatatttaaaattaactcaaagaaaacctcagatttc
atatcgtaagctgactctggacaagcagttcttttaagctctggtagctt
ctccaccttgccactgcttccactcaagttagaaatgcctttattgtctt
aggtcaggttgtattctgcaccaaacaatcatggacagagcaagtaggtt
tctccagctttacttcca

gaattcatgagaaatttacacttggttcacaaagcaataggaagttggtg
aaaagatctaaattttgtttgaaatggtcaacaatatgtaggatatacct
aggtgtggtgcctcatgcctacactaccagcaatggtgcagatgagcatt
gtgtgagacaaattcaatgtcagactgagttacgtggtaagtaatattcc
aggcaagccttggatagtttaatacaatgaccctgttacccaccccctgg
tcaaaataagcaagaattataagaatcatatgctgtgcaaacatgagaaa
ctgagttcaaatccaaagcacccaaacaaaaaaaggacagatgtgattaa
ataagaatcctgctgcaatctgggtggtcatgttagtggatgagatattg
aggtacctggcttcaggacattagactagccttatgttcagaatagacct
tgtctcaagggaatacaatagagagtaaaagagtagaacacttgatatct
tcttatgaacatgaacatgatcatccatgtacacaaaagcaaacaaatga
atgactaaacatatacatttattttgtcttttttttttttcaggaatacc
tttggacaaatgtttttgcatcaatcttgcactacattaatgtcgaaatt
cccagaaaaatgagaaagttaaaatattattagctgtcacagagaggtgg
ccagtatttaagtacactggctactcttcctgaatatctacattcaattc
ccagaacccacaaggtaactcacaactatctgtaactcaatttccaggag
atccaccaccttcttcttcaggattctgtggtcactgtgaacacatgatg
cacagacatgtaggcaaaacaaacatacatacaaaatagtaaatttaaat
atgtataagctacttatatataccttgctttgcagagatgactgaacttt
gtgtgtgtgtgtgtgtgtgtgtgtgtgaaagtattgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_99947216_99948395
seq2: B6Ng01-192G17.b_42_1209

seq1  GAATTCTTGTCTTCACGCTGCTAAGCAATTTTAAAGCTGGTTTCTGCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCTTCACGCTGCTAAGCAATTTTAAAGCTGGTTTCTGCCCC  50

seq1  TCTGATGTGATAAATCTCTTTAATAGAGTATATTCTCTCCACTGTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGTGATAAATCTCTTTAATAGAGTATATTCTCTCCACTGTTCTTT  100

seq1  GAATGACACAGGAAGTAATAAGAATACCATAAATCACATGGTGGTGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACACAGGAAGTAATAAGAATACCATAAATCACATGGTGGTGGTTA  150

seq1  TTCCAATACTCAGCCTAGGTAGAATGTGAAAACACTTCAGAAAAGAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATACTCAGCCTAGGTAGAATGTGAAAACACTTCAGAAAAGAGCCA  200

seq1  TGCACAATTCTGACATAAACTTCTTGTATAGAATGTGAAAATGACTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAATTCTGACATAAACTTCTTGTATAGAATGTGAAAATGACTTTGT  250

seq1  TACGTGTATGGTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGTATGGTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTT  300

seq1  TTATTTTTATTTTTTTTAATCTCGTGGGACTCAGTTTAACCCCATCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTATTTTTTTTAATCTCGTGGGACTCAGTTTAACCCCATCTTTC  350

seq1  TCAAAGATATTTACAAATTCTAGGAAATAGAATCTTTGGAAAGGAGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGATATTTACAAATTCTAGGAAATAGAATCTTTGGAAAGGAGTTAT  400

seq1  GCTTCCATTTCTAAATAACGGAATAAAATTTGAATTTTCTATTGTGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCATTTCTAAATAACGGAATAAAATTTGAATTTTCTATTGTGTAGA  450

seq1  AACTTCTTAAGAGCCTGCCTAAGAATTGCTTTGAAAAATTCCTGAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTAAGAGCCTGCCTAAGAATTGCTTTGAAAAATTCCTGAAAAAA  500

seq1  AAATATGAATCTGACCTAAGTGCCCAAAGTTTTGAAAATCCTTTATAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAATCTGACCTAAGTGCCCAAAGTTTTGAAAATCCTTTATAGCC  550

seq1  CTTTCTTCTTTCCACTTAATAACTTGTTTATATAAAATATAAAGACCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCTTTCCACTTAATAACTTGTTTATATAAAATATAAAGACCTTT  600

seq1  TGAGACAGAATTTATCTGGATTGCTTTAATTTCTCATCATCAGCAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGAATTTATCTGGATTGCTTTAATTTCTCATCATCAGCAAAGAT  650

seq1  TGAAATAGTTTTCTGATTCCCAAACCTGAGACTATTTTTATGCAACAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAGTTTTCTGATTCCCAAACCTGAGACTATTTTTATGCAACAATG  700

seq1  CTATATAAACTGTCCAAGTAGTCTGAGATGTTTTCTCTGGCACATGTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAAACTGTCCAAGTAGTCTGAGATGTTTTCTCTGGCACATGTTCC  750

seq1  CCTCTCCCCCTCAACCCTGTCTTTTTCACTGAGCATCCTAAGCTAATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCCCTCAACCCTGTCTTTTTCACTGAGCATCCTAAGCTAATTTC  800

seq1  AAAGTGCATCATCCTCTAGTCATAGTCTCTTCATTGCTGGGATTTGAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCATCATCCTCTAGTCATAGTCTCTTCATTGCTGGGATTTGAGAC  850

seq1  AGGTATCAACCACCCAGCTAGCAACACACTCTTGGAATGTCGAATCTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATCAACCACCCAGCTAGCAACACACTCTTGGAATGTCGAATCTTTC  900

seq1  TCTGTGGAGAAAACACCTCACATTTCAAAGCAGATATCCAGCGTAGTTGC  950
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  TCTGTGGAG-AAACACCTCACATTTC-AAGCAGATATCCAGCGTAGTTGC  948

seq1  TAATTATAAAAAAAATAATAATTAAAAATTAACTCAAAGAAAAACCTCAG  1000
      ||||||| ||||||||||| ||| ||||||||||||||| ||||||||||
seq2  TAATTAT-AAAAAAATAAT-ATTTAAAATTAACTCAAAG-AAAACCTCAG  995

seq1  ATTTCATATCGTAAAGCTGACTCTGGACAAAGCAG-TCTTTTAAGCTTCT  1049
      |||||||||||| ||||||||||||||| |||||| |||||||||| |||
seq2  ATTTCATATCGT-AAGCTGACTCTGGAC-AAGCAGTTCTTTTAAGC-TCT  1042

seq1  GGTAAGCTTCT-CACCTTGCCACTGCTTTCAACTCAAAGTAGAAATG-CT  1097
      ||| ||||||| |||||||||||||| ||| ||||||  |||||||| ||
seq2  GGT-AGCTTCTCCACCTTGCCACTGC-TTCCACTCAAGTTAGAAATGCCT  1090

seq1  TTATTGTCTTA-GTCAGGGTTTGTATTCCTGCA-CAAACCATCATGACCA  1145
      ||||||||||| ||||||  ||||||| ||||| ||||| ||||||  ||
seq2  TTATTGTCTTAGGTCAGG--TTGTATT-CTGCACCAAACAATCATGGACA  1137

seq1  AGAAGCAAGTTAGGTTTCTTCAGCTTACACTTCCA  1180
         |||||| ||||||||| ||||||  |||||||
seq2  --GAGCAAG-TAGGTTTCTCCAGCTT-TACTTCCA  1168


seq1: chr8_100016445_100017431
seq2: B6Ng01-192G17.g_68_1055 (reverse)

seq1  TCCAAT--CTTCACACACACACACACACACACACACAC-AAGTTCAGTCA  47
      ||||||   ||||||||||||||||||||||||||||| |||||||||||
seq2  TCCAATACTTTCACACACACACACACACACACACACACAAAGTTCAGTCA  50

seq1  TCTCTGCAAAGCAAGGTATATATAAGTAGCTTATACATATTTAAATTTAC  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCAAAGCAAGGTATATATAAGTAGCTTATACATATTTAAATTTAC  100

seq1  TTATTTTTGTATGTATGTTTGTTTTGCCTACATGTCTGTGCATCATGTGT  147
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  T--ATTTTGTATGTATGTTTGTTTTGCCTACATGTCTGTGCATCATGTGT  148

seq1  TCACAGTGACCACAGAATCCTGAAGAAGAAGGTGGTGGATCTCCTGGAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTGACCACAGAATCCTGAAGAAGAAGGTGGTGGATCTCCTGGAAA  198

seq1  TTGAGTTACAGATAGTTGTGAGTTACCTTGTGGGTTCTGGGAATTGAATG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTACAGATAGTTGTGAGTTACCTTGTGGGTTCTGGGAATTGAATG  248

seq1  TAGATATTCAGGAAGAGTAGCCAGTGTACTTAAATACTGGCCACCTCTCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTCAGGAAGAGTAGCCAGTGTACTTAAATACTGGCCACCTCTCT  298

seq1  GTGACAGCTAATAATATTTTAACTTTCTCATTTTTCTGGGAATTTCGACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCTAATAATATTTTAACTTTCTCATTTTTCTGGGAATTTCGACA  348

seq1  TTAATGTAGTGCAAGATTGATGCAAAAACATTTGTCCAAAGGTATTCCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTAGTGCAAGATTGATGCAAAAACATTTGTCCAAAGGTATTCCTG  398

seq1  AAAAAAAAAAAAGACAAAATAAATGTATATGTTTAGTCATTCATTTGTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAGACAAAATAAATGTATATGTTTAGTCATTCATTTGTTT  448

seq1  GCTTTTGTGTACATGGATGATCATGTTCATGTTCATAAGAAGATATCAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTGTACATGGATGATCATGTTCATGTTCATAAGAAGATATCAAG  498

seq1  TGTTCTACTCTTTTACTCTCTATTGTATTCCCTTGAGACAAGGTCTATTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTACTCTTTTACTCTCTATTGTATTCCCTTGAGACAAGGTCTATTC  548

seq1  TGAACATAAGGCTAGTCTAATGTCCTGAAGCCAGGTACCTCAATATCTCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATAAGGCTAGTCTAATGTCCTGAAGCCAGGTACCTCAATATCTCA  598

seq1  TCCACTAACATGACCACCCAGATTGCAGCAGGATTCTTATTTAATCACAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTAACATGACCACCCAGATTGCAGCAGGATTCTTATTTAATCACAT  648

seq1  CTGTCCTTTTTTTGTTTGGGTGCTTTGGATTTGAACTCAGTTTCTCATGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTTTTTTTGTTTGGGTGCTTTGGATTTGAACTCAGTTTCTCATGT  698

seq1  TTGCACAGCATATGATTCTTATAATTCTTGCTTATTTTGACCAGGGGGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAGCATATGATTCTTATAATTCTTGCTTATTTTGACCAGGGGGTG  748

seq1  GGTAACAGGGTCATTGTATTAAACTATCCAAGGCTTGCCTGGAATATTAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAGGGTCATTGTATTAAACTATCCAAGGCTTGCCTGGAATATTAC  798

seq1  TTACCACGTAACTCAGTCTGACATTGAATTTGTCTCACACAATGCTCATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACGTAACTCAGTCTGACATTGAATTTGTCTCACACAATGCTCATC  848

seq1  TGCACCATTGCTGGTAGTGTAGGCATGAGGCACCACACCTAGGTATATCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCATTGCTGGTAGTGTAGGCATGAGGCACCACACCTAGGTATATCC  898

seq1  TACATATTGTTGACCATTTCAAACAAAATTTAGATCTTTTCACCAACTTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTGTTGACCATTTCAAACAAAATTTAGATCTTTTCACCAACTTC  948

seq1  CTATTGCTTTGTGAACCAAGTGTAAATTTCTCATGAATTC  987
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCTTTGTGAACCAAGTGTAAATTTCTCATGAATTC  988


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