BAC Information

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BAC

Clone NameB6Ng01-192O04
Chromosome8 (Build37)
Map Location 108,766,366 - 108,766,874
singlet/doubletsinglet
Overlap genePrmt7
Upstream geneD230025D16Rik, C76566, Tradd, Fbxl8, Hsf4, Nol3, 4931428F04Rik, Exoc3l, E2f4, Elmo3, Lrrc29, Hspc171, Fhod1, Slc9a5, Plekhg4, Kctd19, Lrrc36, 2700055K07Rik, Zdhhc1, LOC667837, Hsd11b2, Atp6v0d1, Agrp, EG667846, 2310066E14Rik, LOC546100, Ctcf, EG546101, D130029J02Rik, Acd, Pard6a, E130303B06Rik, 4933405L10Rik, Gfod2, Ranbp10, Tsnaxip1, Cenpt, LOC100041617, Thap11, Nutf2, Edc4, Nrn1l, Pskh1, Ctrl, Psmb10, Lcat, Slc12a4, Dpep3, Dpep2, Ddx28, Dus2l, Nfatc3, Rbm35b, Lypla3, Slc7a6, Slc7a6os
Downstream geneSmpd3, Zfp90, 6030452D12Rik, Cdh3, LOC100042734, Cdh1, Tmco7, Has3, 5830457O10Rik, Cirh1a, EG234703, Sntb2, Vps4a, Cog8, Nip7, Tmed6, Terf2, EG667847, Cyb5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192O04.g
ACCGA016007
length591
definitionB6Ng01-192O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcgttgttcgctggtctgtgatgcctgcccggcgttctgtctgt
cttggtgctccgctgaaaggatttaccgaaagaaccagctctgctggaaa
cattttcctctgggatcacagccccggattcgaatgaacctcttctgaaa
ggatggaagacaccttacagagatggagggagggaggatctgaccgtgga
gctctctgaccgaggcttcagcccgggtggagttgaggaggagtctccgg
gaccccttggagttgtatacagaaatatatctgcacatgcatgcattttg
tggggagagaagactccaagcataaatccttctccagtggatctgtgacc
cataaaggcacccctacttttagggagccccttgaaggaagggtaaatgg
gccagatggggaagaaatttgtcaccatggactagaaggcaccttcctgc
tagtgtagcaggtcttagctgggccttctgactgggttgtggagggtgtt
tcctagagcaggcccccgtgggaaagtgaggagtaagggctacagcgggt
tatcgtgtgtgctgaggaggcaggtgggatggggtgggggt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_108766366_108766874
seq2: B6Ng01-192O04.g_146_654

seq1  AACCTGCTCTGCTGGAAGCCTTTTCCTCTGGGATCACAGCCCCACCTTCA  50
      |||| |||||||||||| | |||||||||||||||||||||||   ||| 
seq2  AACCAGCTCTGCTGGAAACATTTTCCTCTGGGATCACAGCCCCGGATTCG  50

seq1  GCTATGCCTCTTCTGTTTTTATCTGTTGCACCTTTCTGAAATCCCCTAAT  100
        |   |||||||||     ||      |||||| | || ||      | 
seq2  AATGAACCTCTTCTGAAAGGATGGAAGACACCTTACAGAGATGGAGGGAG  100

seq1  ATGTAATCTGACCGTGGAGCTCTCTGACCGAGGCTTCAGCCCGGGTGGAG  150
           |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATCTGACCGTGGAGCTCTCTGACCGAGGCTTCAGCCCGGGTGGAG  150

seq1  TTGAGGAGGAGTCTCCGGGACCCCTTGGAGTTGTATACAGAAATATATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGGAGTCTCCGGGACCCCTTGGAGTTGTATACAGAAATATATCT  200

seq1  GCACATGCATGCATTTTGTGGGGAGAGAAGACTCCAAGCATAAATCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCATGCATTTTGTGGGGAGAGAAGACTCCAAGCATAAATCCTTC  250

seq1  TCCAGTGGATCTGTGACCCATAAAGGCACCCCTACTTTTAGGGAGCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGGATCTGTGACCCATAAAGGCACCCCTACTTTTAGGGAGCCCCT  300

seq1  TGAAGGAAGGGTAAATGGGCCAGATGGGGAAGAAATTTGTCACCATGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAAGGGTAAATGGGCCAGATGGGGAAGAAATTTGTCACCATGGAC  350

seq1  TAGAAGGCACCTTCCTGCTAGTGTAGCAGGTCTTAGCTGGGCCTTCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGCACCTTCCTGCTAGTGTAGCAGGTCTTAGCTGGGCCTTCTGAC  400

seq1  TGGGTTGTGGAGGGTGTTTCCTAGAGCAGGCCCCCGTGGGAAAGTGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGTGGAGGGTGTTTCCTAGAGCAGGCCCCCGTGGGAAAGTGAGGA  450

seq1  GTAAGGGCTACAGCGGGTTATCGTGTGTGCTGAGGAGGCAGGTGGGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGCTACAGCGGGTTATCGTGTGTGCTGAGGAGGCAGGTGGGATGG  500

seq1  GGTGGGGGT  509
      |||||||||
seq2  GGTGGGGGT  509