BAC Information

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BAC

Clone NameB6Ng01-193L11
Chromosome8 (Build37)
Map Location 19,879,472 - 19,927,585
singlet/doubletdoublet
Overlap geneLOC547150, LOC100040599
Upstream geneAgpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6, EG574081, Defb5, Defb3, Defb54-ps, LOC100040504, LOC100040514, Defb8, LOC100040528, LOC100041511, Defb7, LOC670326, LOC100040561, LOC624198, EG665730, 4930467E23Rik, LOC100041567
Downstream geneEG665822, 6820431F20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193L11.bB6Ng01-193L11.g
ACCGA016607GA016608
length1,1361,037
definitionB6Ng01-193L11.b B6Ng01-193L11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,924,176 - 19,927,585)(19,879,472 - 19,880,508)
sequence
gaattcaaaattcaggtcataaggacaggagaggacacattttgtccttt
ctttttatgtctttccattttgtagagaatgatgatgtgaggtagcaaag
agcagaagataaaagcataacactaagcaggtccccatcaaagatttcta
gatactctgggccttttactcatcatgcagaaaggaagcagaggttgcta
aatatcagatagtgtccttagtgatgaagttggtctgaatacagaaacat
tttggggactataaatcaagattctgacattagcagacaggtgataaaat
gaataaaatcagtgaaactttaaatcaaaagtaacattgccaattttcct
tataggtgcgaggaaataaaccacctattttccgtacctttcctcggaag
catagaattcatgtgcttgaggctcctggtgacattgagccaactcattc
cacctgtgctgctgacagcagggctcctgctgatgctgagccaaattctt
ccacctgtgctgctgtcaatggggctcctgctgatgttgagccaactact
tcttcccagtgtgctcctgactgtgaggatcctgcagtcattaagccaac
tcattccacctgtgctgctgacagcagggctcctgctgatgctgagccaa
attcttccacctgtgctgctgtcaatggggctactgctgatgttgagcca
actacttcttcccagtgtgctcctgactgtgaggatcctgcagtcattga
gccaactcattccacctgtgctgctgacagcagggctcctgctgatgctg
agccaaattccttccacctgtgctgctgtcaatggggcttcctgctgatg
ttgagccatctacttcatcaccttgttgctgacgatggtgctgcatgatg
atgtgaagacactactcctcagtgtgctcctgactgtgaggatgctgcag
tcattgagcaactcattcctactgctgctgctgacagcaggctgcctgct
gatgatgagcaacattctaccaactgtgctgctgcaatgggaggctactg
actgatgatgaccacctacatctacccagtgtgctcctgactgtggagat
ctgcagtcatggagctactcatcactgtgctgctga
gaattccataaccattacagttggccaaccacagcataaaccaagactta
agcacaaatggaaaataagaggaatcttatgtcatagtctgtgagatgga
aggaaagacaaggcagacctcaggaaatgatgatggtaatgaaaataatc
aatgaagaaatgaatgactaaggtatgtgtgtgggaggggtacaggtatg
gaatccagagctctgtagacaggcacagaaggatcacagaaattttaaga
agtcagaggctagtttgatctaatctgactttcatagtgaattccatcca
gcacagcccaacctagcaaggtactgtatttatagagaaaaagtttaaaa
aggcaagtcttcattgagctttgtgaatcaattaattaaattatgctgat
caattaacactacagtgtcaactaataggtcaaattcccattgactcact
ggaggatctattaatgctactgaagtcaattacagctaccgcatcaattt
gttcttttatggtctgacatctccctcaccagctcagcatcctatcttgc
tggacagcttttcataggatgctatccagtctcaccccaatcacaagaag
aaaaattgaacagttaacctgttgcaggcagcatattattgcttcttcaa
acccaaccagcacactcctactcattagcagtaagatggagccattggca
tagtttaccttcccagattccttgtatttctctgacctagagtccctcta
gctcccagacttcttgaatttccccctatataacattctttgattactcc
tcccacttaaaattcatctttccttgtttagaaatatctgcttcttcttg
gtggtatccagagtcaggtgttctcaaaaacacatgcattctctattaac
ccattacccatggataaacacagagtgagacctagattcctctcattttc
ccagggaaggcaaaatgcaagcctgtcactgtgctaccacatttgttgca
catgtgccttgaaactggagatgacaaaaacccaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_19924176_19927585
seq2: B6Ng01-193L11.b_46_1181 (reverse)

seq1  TCAGCAGCACAGGTGGAATGAGTTGGCTCAATGACTGCAGGATCCTCACA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GTCAGGAGCACACTGGGAAGTAGTTGGCTCAACATCAGCAGGAGCACCAC  100
                                                        
seq2  --------------------------------------------------  0

seq1  TGTCAGGAACAAGTTGTGAAGTAGTTGGCTCAACATCAGCAGTAGCCCCA  150
                                                        
seq2  --------------------------------------------------  0

seq1  TTGACAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAGCCCT  200
                                                        
seq2  --------------------------------------------------  0

seq1  GCTGTCAGCAGCACAGGTGGAATGAGTTGGCTCAATGACTGCAGGATCCT  250
                                                        
seq2  --------------------------------------------------  0

seq1  CACAGTCAGGAGCACACTGGGAAGTAGTTGGCTCAACATCAGCAGGAGCA  300
                                                        
seq2  --------------------------------------------------  0

seq1  CCACTGTCAGGAACAAGTTGTGAAGTAGTTGGCTCAACATCAGCAGGAGC  350
                                                        
seq2  --------------------------------------------------  0

seq1  CCCATTGACAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAG  400
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTGCTGTCAGCAGCACAGGTGGAATGAGTTGGCTCAATGACTGCAGGA  450
                                                        
seq2  --------------------------------------------------  0

seq1  TCCTCACAGTCAGGAGCACACTGGGAAGAAGTAGTTGGCTCAACATCAGC  500
                                                        
seq2  --------------------------------------------------  0

seq1  AGGAGCCCCATTGACAGCAGCACAGGTGGAAGAATTTGGCTCAACATCAG  550
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGAGCCCTGCTGTCAGCAGCACAGGTGGAATGAGTTGGCTCAATGACT  600
                                                        
seq2  --------------------------------------------------  0

seq1  GCAGGATCCTCAGAGTCAGGAGCACACTGGGAAGAAGTAGTTGGCTCATC  650
                                                        
seq2  --------------------------------------------------  0

seq1  ATCAGCAGGAGCCCCATTGACAGCAGCACAGGTGGAAGAATTTGGCTCAG  700
                                                        
seq2  --------------------------------------------------  0

seq1  CATCAGCAGGAGCCCTGCTGTCAGCAGCACAGGTGGAATGAGTTGGCTCA  750
                                                        
seq2  --------------------------------------------------  0

seq1  ATGACTGCAGGATCCTCACAGTCAGGAGCACACTGGGAAGTGTTGGCTCA  800
                                                        
seq2  --------------------------------------------------  0

seq1  ACATCAGCAGGAGCACCGCTGTCAGGAACAAGTTGTGAAGTAGTTGGCTC  850
                                                        
seq2  --------------------------------------------------  0

seq1  AACATCAGCAGGAGCCCCATTGACAGCAGCACAGGTGGAAGAATTTGGCT  900
                                                        
seq2  --------------------------------------------------  0

seq1  CAGCATCAGCAGGAGCCCTTCTGTCAGCAGCACAGGTGGAATGAGTTGGC  950
                                                        
seq2  --------------------------------------------------  0

seq1  TCAATGACTGCAGGATCCTCACAGTCAGGAGCACACTGGGAAGAAGTAGT  1000
                                                        
seq2  --------------------------------------------------  0

seq1  TGGCTCAACATCAGCAGGAGCCCCATTGACAAGAGCACAGGTGGAAGAAT  1050
                                                        
seq2  --------------------------------------------------  0

seq1  TTGGCTCAGCATCAGCAGGAGCCCTGCTGTCAGCAGCACAGGTGGAATGA  1100
                                                        
seq2  --------------------------------------------------  0

seq1  GTTGGCTCAATGACTGCAGGATCCTCACAGTCAGGAGCACACTGGGAAGT  1150
                                                        
seq2  --------------------------------------------------  0

seq1  ATTAGTTGGCTCATCATCAGCAAGAGCCCCATTGACAGCAGCACAGGTTG  1200
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAATTTGGCTCAGCATCAGCAGGAGCCCTGCTGTCAGCAGCACAGGTG  1250
                                                        
seq2  --------------------------------------------------  0

seq1  GAATGAGTTGGCTCAATGACTGCAGGATCCTCACAGTCAGGAGCACACTG  1300
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAGAAGTAGTTGGCTCAACATCAGCAGGAGCACCACTGTCAGGAACAA  1350
                                                        
seq2  --------------------------------------------------  0

seq1  GTTGTGAAGTAGTTGGCTCAACATCAGCAGTAGCCCCATTGACAGCAGCA  1400
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAGCCCTGCTGTCAGCAGC  1450
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGTTGGAATGAGTTGGCTCAATGACTGCAGGATCCTCACAGTCAGGAG  1500
                                                        
seq2  --------------------------------------------------  0

seq1  CACACTGGGAAGAAGTACTTGGCTCAACACCAGCAGGAGCCCCATTGACA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  GCAGCACAGGTGGAAGAATTTGGCTCAGCACCAGCAGGAGCCCTGCTGTC  1600
                                                        
seq2  --------------------------------------------------  0

seq1  AGCAGCACAGTTGGAATGAGTTGGCTCAATGACTGCAGGATACTCACAGT  1650
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGAGCACACTGGGAAGTAGTTGGCTCAACATCAGCAGGAGCACCACTG  1700
                                                        
seq2  --------------------------------------------------  0

seq1  TCAGGAACAAGTTGTGAAGTAGTTGGCTCAACATCAGCAGGAGCACCACT  1750
                                                        
seq2  --------------------------------------------------  0

seq1  GTCAGGAACAAGTTGTGAAGTAGTTGGCTCAACATCAGCAGTAGCCCCTT  1800
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAGCCCTG  1850
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTCAGCAGCACAGGTGGAATGAGTTGGCTCAATGACTGCAGGATCCTC  1900
                                                        
seq2  --------------------------------------------------  0

seq1  CCAGTCAGGAGCACACTGGGAAGAAGTAGTTGGCTCAACACCAACAGGAG  1950
                                                        
seq2  --------------------------------------------------  0

seq1  ATCCATTGACAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGA  2000
                                                        
seq2  --------------------------------------------------  0

seq1  GCCCTGCTGTCAGCAGCACAGGTGGAATGAGTTGGCTCAATGACTGCAGG  2050
                                                        
seq2  --------------------------------------------------  0

seq1  ATCCTCACAGTCAGGAGCACACTGGGAAGTTGTAGTTGGCTCATCATTAG  2100
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGAGCCCCATTGACAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCA  2150
                                                        
seq2  --------------------------------------------------  0

seq1  GCAGGAGCCCTGCTGTCAGCAGCACAGGTGGAATGAGTTGGATCAATGAC  2200
                     ||||||||||| |||  ||||| | | || |||||
seq2  ---------------TCAGCAGCACA-GTG--ATGAG-TAGCTCCATGAC  31

seq1  TGCAGGATCCTCACAGTCAGGAGCACACTGGGAAGAAGTAGTTGGCTCAA  2250
      |||| ||||  ||||||||||||||||||||| ||| |||| ||| ||| 
seq2  TGCA-GATCTCCACAGTCAGGAGCACACTGGGTAGATGTAGGTGG-TCAT  79

seq1  CATCAG-CAGGAGC--CCCATTGACAGCAGCACAGGTGGAAGAATTTGGC  2297
      |||||| ||| |||  ||||||| ||||||||||| ||| ||||| | ||
seq2  CATCAGTCAGTAGCCTCCCATTG-CAGCAGCACAGTTGGTAGAATGTTGC  128

seq1  TCAGCATCAGCAGGAGCCCTGCTGTCAGCAGCA-CAGGTGGAATGAGTTG  2346
      ||| ||||||||||   |||||||||||||||| |||  |||||||||| 
seq2  TCATCATCAGCAGGCAGCCTGCTGTCAGCAGCAGCAGTAGGAATGAGTT-  177

seq1  GCTCAATGACTGCAGGATCCTCACAGTCAGGAGCACACTGGGAAGTTGTA  2396
      ||||||||||||||| |||||||||||||||||||||||| | ||| || 
seq2  GCTCAATGACTGCAGCATCCTCACAGTCAGGAGCACACTGAGGAGTAGT-  226

seq1  GTTGGCTCATCATTAGCAGGAGCCCCATTGACAGCAGCACAGGTGGAAGA  2446
      ||   | ||||||            |||     |||||||          
seq2  GTCTTCACATCAT------------CAT-----GCAGCAC----------  249

seq1  ATTTGGCTCAGCATCAGCAGGAGCCCTGCTGTCAGCAGCACAGGTGGAAT  2496
                 ||||               ||||||| || ||||     
seq2  -----------CATC---------------GTCAGCAACA-AGGT-----  267

seq1  GAGTTGGCTCAATGACTGCAGGATCCTCACAGTCAGGAGCACACTGGGAA  2546
                                                     || 
seq2  -----------------------------------------------GAT  270

seq1  GAAGTAGTTGGCTCAACATCAGCA-GTAGCCCCATTGACAGCAGCACAGG  2595
      ||||||| |||||||||||||||| | |||||||||||||||||||||||
seq2  GAAGTAGATGGCTCAACATCAGCAGGAAGCCCCATTGACAGCAGCACAGG  320

seq1  TGGAA-GAATTTGGCTCAGCATCAGCAGGAGCCCTGCTGTCAGCAGCACA  2644
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGAATTTGGCTCAGCATCAGCAGGAGCCCTGCTGTCAGCAGCACA  370

seq1  GGTGGAATGAGTTGGCTCAATGACTGCAGGATCCTCACAGTCAGGAGCAC  2694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAATGAGTTGGCTCAATGACTGCAGGATCCTCACAGTCAGGAGCAC  420

seq1  ACTGGGAAGAAGTAGTTGGCTCAACATCAGCAGTAGCCCCATTGACAGCA  2744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAAGAAGTAGTTGGCTCAACATCAGCAGTAGCCCCATTGACAGCA  470

seq1  GCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAGCCCTGCTGTCAGC  2794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAGCCCTGCTGTCAGC  520

seq1  AGCACAGGTGGAATGAGTTGGCTCAATGACTGCAGGATCCTCACAGTCAG  2844
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGCACAGGTGGAATGAGTTGGCTTAATGACTGCAGGATCCTCACAGTCAG  570

seq1  GAGCACACTGGGAAGAAGTAGTTGGCTCAACACCAGCAGGAGCCCCATTG  2894
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAGCACACTGGGAAGAAGTAGTTGGCTCAACATCAGCAGGAGCCCCATTG  620

seq1  ACAGCAGCACAGGTAGAAGAATTTGGCTCAGCATCAGCAGGAGCCCTGCT  2944
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAGCCCTGCT  670

seq1  GTCAGCAGCACAGGTGGAATGAGTTGGCTCAATGTCACCAGGAGCCTCAA  2994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCAGCACAGGTGGAATGAGTTGGCTCAATGTCACCAGGAGCCTCAA  720

seq1  GCACATGAATTCTATGCTTCCGAGGAAAGGTATGGAAAATAGGTGGTTTA  3044
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCACATGAATTCTATGCTTCCGAGGAAAGGTACGGAAAATAGGTGGTTTA  770

seq1  TTTCCTCGCACCTATAAGGAAAATTGGCAATGTTACTTTTGATTTAAAGT  3094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCGCACCTATAAGGAAAATTGGCAATGTTACTTTTGATTTAAAGT  820

seq1  TTCACTGATTTTATTCATTTTATCACCTGTCTGCTAATGTCAGAATCTTG  3144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGATTTTATTCATTTTATCACCTGTCTGCTAATGTCAGAATCTTG  870

seq1  ATTTATAGTCCCCAAAATGTTTCTGTATTCATACCAACTTCATCACTAAG  3194
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTTATAGTCCCCAAAATGTTTCTGTATTCAGACCAACTTCATCACTAAG  920

seq1  GACACTATCTGATATTTAGCAACCTCTGCTTCCTTTGTGCATGATGAGTA  3244
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GACACTATCTGATATTTAGCAACCTCTGCTTCCTTTCTGCATGATGAGTA  970

seq1  AAAGGCCCAGAGTATCTAGAAATCTTAGATGGGGACCTGCTTAGTGTTAT  3294
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAAGGCCCAGAGTATCTAGAAATCTTTGATGGGGACCTGCTTAGTGTTAT  1020

seq1  GCTTTTATCTTCTGCTCTTTGCTACCTCACATCATCATTCTCTACAAAAT  3344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATCTTCTGCTCTTTGCTACCTCACATCATCATTCTCTACAAAAT  1070

seq1  GGAAAGACATAAAAAGAAAGGACAAAATGTGTCCTCTCCTGTCTTTATGA  3394
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGAAAGACATAAAAAGAAAGGACAAAATGTGTCCTCTCCTGTCCTTATGA  1120

seq1  CCTGAATTTTGAATTC  3410
      ||||||||||||||||
seq2  CCTGAATTTTGAATTC  1136

seq1: chr8_19879472_19880508
seq2: B6Ng01-193L11.g_63_1099

seq1  GAATTCCATAACCATTACAGTTGGCCAACCACAGCATAAACCAAGACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAACCATTACAGTTGGCCAACCACAGCATAAACCAAGACTTA  50

seq1  AGCACAAATGGAAAATAAGAGGAATCTTATGTCATAGTCTGTGAGATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAATGGAAAATAAGAGGAATCTTATGTCATAGTCTGTGAGATGGA  100

seq1  AGGAAAGACAAGGCAGACCTCAGGAAATGATGATGGTAATGAAAATAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGACAAGGCAGACCTCAGGAAATGATGATGGTAATGAAAATAATC  150

seq1  AATGAAGAAATGAATGACTAAGGTATGTGTGTGGGAGGGGTACAGGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGAAATGAATGACTAAGGTATGTGTGTGGGAGGGGTACAGGTATG  200

seq1  GAATCCAGAGCTCTGTAGACAGGCACAGAAGGATCACAGAAATTTTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAGAGCTCTGTAGACAGGCACAGAAGGATCACAGAAATTTTAAGA  250

seq1  AGTCAGAGGCTAGTTTGATCTAATCTGACTTTCATAGTGAATTCCATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGGCTAGTTTGATCTAATCTGACTTTCATAGTGAATTCCATCCA  300

seq1  GCACAGCCCAACCTAGCAAGGTACTGTATTTATAGAGAAAAAGTTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCCCAACCTAGCAAGGTACTGTATTTATAGAGAAAAAGTTTAAAA  350

seq1  AGGCAAGTCTTCATTGAGCTTTGTGAATCAATTAATTAAATTTTGCTGAT  400
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGCAAGTCTTCATTGAGCTTTGTGAATCAATTAATTAAATTATGCTGAT  400

seq1  CAATTAACACTACAGTGTCAACTAATAGGTCAAATTCCCATTGACTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAACACTACAGTGTCAACTAATAGGTCAAATTCCCATTGACTCACT  450

seq1  GGAGGATCTACTAATGCTACTGAAGTCAATTACAGCTACCGCATCAATTT  500
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATCTATTAATGCTACTGAAGTCAATTACAGCTACCGCATCAATTT  500

seq1  GTTCTTTTATGGTCTGACATTTCCCTCACCAGCTCAGCATCCTATCTTGC  550
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTTCTTTTATGGTCTGACATCTCCCTCACCAGCTCAGCATCCTATCTTGC  550

seq1  TGGACAGCTTTTCATAGGATGCTTTCCAGTCTCACCCCAATCACAAGAAG  600
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGGACAGCTTTTCATAGGATGCTATCCAGTCTCACCCCAATCACAAGAAG  600

seq1  AAAAATTGAACAGTTAACCTGTTGCAGGCAGCATATTATTGCTTCTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGAACAGTTAACCTGTTGCAGGCAGCATATTATTGCTTCTTCAA  650

seq1  ACCCAACCAGCACACTCCTACTCATTAGCAGTAAGATGGAGCCATTGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACCAGCACACTCCTACTCATTAGCAGTAAGATGGAGCCATTGGCA  700

seq1  TAGTTTACCTTCCCAGATTCCTTGTATTTCTCTGACCTAGAGTCCCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTACCTTCCCAGATTCCTTGTATTTCTCTGACCTAGAGTCCCTCTA  750

seq1  GCTCCCAGACTTCTTGAATTTCCCCCTATATAACATTTTTTGATTACTCC  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCTCCCAGACTTCTTGAATTTCCCCCTATATAACATTCTTTGATTACTCC  800

seq1  TCCCACTTAAAATTCATCTTTCCTTGTTTAGAAATATCTGCTTCTTCTGG  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCCACTTAAAATTCATCTTTCCTTGTTTAGAAATATCTGCTTCTTCTTG  850

seq1  GTGGTATCCAGAGTCCAGGTGTTCTCAAAAACACATGCATTCTCTATTAA  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTGGTATCCAGAGT-CAGGTGTTCTCAAAAACACATGCATTCTCTATTAA  899

seq1  CCCATTACCCATGGATAAACACAGAGTGAGAACCTAGATTCCTCTCATTT  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCCATTACCCATGGATAAACACAGAGTGAG-ACCTAGATTCCTCTCATTT  948

seq1  TCCCAGGG-AGGCAAAATGCAAGCCTGTCACTGTTGCTAACCACATT--G  997
      |||||||| |||||||||||||||||||||||| |||| ||||||||   
seq2  TCCCAGGGAAGGCAAAATGCAAGCCTGTCACTG-TGCT-ACCACATTTGT  996

seq1  TGCACATGTGCCTTGAAACTGGAGATGACAAAAA-CCAAAC  1037
      |||||||||||||||||||||||||||||||||| ||||||
seq2  TGCACATGTGCCTTGAAACTGGAGATGACAAAAACCCAAAC  1037