BAC Information

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BAC

Clone NameB6Ng01-194E19
Chromosome8 (Build37)
Map Location 12,415,870 - 12,417,036
singlet/doubletsinglet
Overlap geneEG434280
Upstream geneCol4a2, Rab20, 0710008K08Rik, Cars2, Ing1, Ankrd10, 1700016D06Rik, EG665271, LOC665363, LOC624710, LOC665373, Arhgef7, 1700018L24Rik, LOC100040155, LOC100040175, EG434279, Sox1
Downstream gene1700094C09Rik, Tubgcp3, Atp11a, LOC100040229, Mcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194E19.bB6Ng01-194E19.g
ACCGA017035GA017036
length1,1751,206
definitionB6Ng01-194E19.b B6Ng01-194E19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcattcaccagggtcattcttggtgctgggtggggttgaggga
cctgcaatccagtctgtggactttgctcgatctctgtttcctgttttctc
ctttccctggtctatgtctgtggtctcagcctccactgtccatcagccta
gttttctgcagagaaacctgctgtgttggaggtggcccgttcagcctagt
ttgctgtgttgggagttgggatagctgccaaaaacagcctggggaaggtc
cttctggaccaatggctctcctcgggggtttcagtgggtcattcagacct
aataactataatctgggcctctgtggctctgctgtaagaaccggtgtgct
tcttatgagtctgcacatttgccctcagctttcttaagtcttctcaccct
tcctcctcctgcaggcccacaaaatggatagttcacatgtcctccccccc
cccacttcccttcccttcctctctcctgtgtcacctaattctcatcttag
gggggttctgaaaagggaaaaaaatggaaataaaaaatttcagaacactg
aacttggctaggcattgctcagtttccaagttttaaagcaagcagcttcc
acgccatgcccacatcaccccaatggctgtacggagtacctgcgcactgg
cttcgctgccctgcccttgtaatctgtcctgaggctttgcattgctggct
gcattagagctttctcttctattgggtcttcgacattttgcctttctcac
gagattcttcctttgtcctttatctcccacattcttggtaacttgtgagg
aaggcaggctagctttagttcctctacctctgcattttcaagctttgagc
tttgccactccacaccacactgggcttcagtccaaccaacccattcaagg
agggaagagatctgagctcttccaggctaaatcgtgaggcaagtccattc
tcctgaaatttttgggagccactgcattaaatggcacgttcatccagtca
gaggagcatcaggatctttccttctccacctctttccacatcttcaccct
ccagacagacggcctaggtcggtagatattcacttaatatggtcttcctg
gatgaataggattcttggtttagaaactgtctacaaatgttcatgtcaag
ctgggttgtccttaaccatcaccac
gaattcagaaaagttgaaagaaggaagaaaatagttgtccttgcttcgga
catttagcactgacagcaccttggagcactttgttgttttaataaagaat
ttaatatgccccattaaaaaatggggctcagaactgaacaaagaattctc
acctgaggaataccgaatggcagagaaacacctgaaaaaatgttcaacat
ccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacctc
acaccagtcagaatggctaagatcaaaaattcaggtgacagcagatgctg
gcgtggatgtggagaaagaggaacactcctccattgttggtgggattgca
ggcttgtacaaccactctggaaatcagtctggcggttcctcagaaaattg
gacatagtactaccggaggatccagcaatacctctcctgggcatatatcc
agaagatgccccaatgggtaagaaggacacatgctccactatgttcatag
cagccttatttataatagccagaagctggaaagaacccagatgcccctca
acagaggaatggatacagaaaatgtggtacatctacacaatggagtacta
ctcagctattaaaaagaatgaatttatgaaattcctaggcaaatggatgg
acctggagggcatcatcctgagtgaggtaacacattcacaaagaaactca
cacaatatgtactcactgataagtggatattagccccaaacctaggatac
ccaagatataagatacaatttgctaaacacatgaaactcaagaagaatga
agactgaagtgtggacactatgcccctccttagaattgggaacaaaacac
ccatggaaaggagttacagagacaaagtttggagctgagatgaaaggatg
gaccatgtagagactgccatatccagggatccaccccataatcagcattc
aaacgctgaacaccattgcatacactagcaagattttatgaaaggatctc
agatgtagctgtctcttggtgagaactatgccgggcctagcaacacagaa
gtgatgctcacagtcagctatgatgatcaccaggcttccaatgaaggagc
tgagaaagtagccaaggagcctaaagggaatctgcatcttataggtgaca
cattattgaaccttaacccgataccctcgcggaagccttctctgtagcac
tctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_12415870_12417036
seq2: B6Ng01-194E19.b_47_1221

seq1  GAATTCTGCATTCACCAGGGTCATTCTTGGTGCTGGGTGGGGTTGAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATTCACCAGGGTCATTCTTGGTGCTGGGTGGGGTTGAGGGA  50

seq1  CCTGCAATCCAGTCTGTGGACTTTGCTCGATCTCTGTTTCCTGTTTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAATCCAGTCTGTGGACTTTGCTCGATCTCTGTTTCCTGTTTTCTC  100

seq1  CTTTCCCTGGTCTATGTCTGTGGTCTCAGCCTCCACTGTCCATCAGCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTGGTCTATGTCTGTGGTCTCAGCCTCCACTGTCCATCAGCCTA  150

seq1  GTTTTCTGCAGAGAAACCTGCTGTGTTGGAGGTGGCCCGTTCAGCCTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGCAGAGAAACCTGCTGTGTTGGAGGTGGCCCGTTCAGCCTAGT  200

seq1  TTGCTGTGTTGGGAGTTGGGATAGCTGCCAAAAACAGCCTGGGGAAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGTTGGGAGTTGGGATAGCTGCCAAAAACAGCCTGGGGAAGGTC  250

seq1  CTTCTGGACCAATGGCTCTCCTCGGGGGTTTCAGTGGGTCATTCAGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGACCAATGGCTCTCCTCGGGGGTTTCAGTGGGTCATTCAGACCT  300

seq1  AATAACTATAATCTGGGCCTCTGTGGCTCTGCTGTAAGAACCGGTGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTATAATCTGGGCCTCTGTGGCTCTGCTGTAAGAACCGGTGTGCT  350

seq1  TCTTATGAGTCTGCACATTTGCCCTCAGCTTTCTTAAGTCTTCTCACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGAGTCTGCACATTTGCCCTCAGCTTTCTTAAGTCTTCTCACCCT  400

seq1  TCCTCCTCCTGCAGGCCCACAAAATGGATAGTTCACATGTCCTCCCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTGCAGGCCCACAAAATGGATAGTTCACATGTCCTCCCCCCC  450

seq1  CCCACTTCCCTTCCCTTCCTCTCTCCTGTGTCACCTAATTCTCATCTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTCCCTTCCCTTCCTCTCTCCTGTGTCACCTAATTCTCATCTTAG  500

seq1  GGGGGTTCTGAAAAGGGAAAAAAATGGAAATAAAAAATTTCAGAACACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTTCTGAAAAGGGAAAAAAATGGAAATAAAAAATTTCAGAACACTG  550

seq1  AACTTGGCTAGGCATTGCTCAGTTTCCAAGTTTTAAAGCAAGCAGCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGCTAGGCATTGCTCAGTTTCCAAGTTTTAAAGCAAGCAGCTTCC  600

seq1  ACGCCATGCCCACATCACCCCAATGGCTGTACGGAGTACCTGCGCACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCATGCCCACATCACCCCAATGGCTGTACGGAGTACCTGCGCACTGG  650

seq1  CTTCGCTGCCCTGCCCTTGTAATCTGTCCTGAGGCTTTGCATTGCTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGCTGCCCTGCCCTTGTAATCTGTCCTGAGGCTTTGCATTGCTGGCT  700

seq1  GCATTAGAGCTTTCTCTTCTATTGGGTCTTCGACATTTTGCCTTTCTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGAGCTTTCTCTTCTATTGGGTCTTCGACATTTTGCCTTTCTCAC  750

seq1  GAGATTCTTCCTTTGTCCTTTATCTCCCACATTCTTGGTAACTTGTGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCTTCCTTTGTCCTTTATCTCCCACATTCTTGGTAACTTGTGAGG  800

seq1  AAGGCAGGCTAGCTTTAGTTCCTCTACCTCTGCATTTTCAAGCTTTGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGCTAGCTTTAGTTCCTCTACCTCTGCATTTTCAAGCTTTGAGC  850

seq1  TTTGCCACTCCACACCACACTGGGCTTCAGTCCAACCAACCCATTCAAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCACTCCACACCACACTGGGCTTCAGTCCAACCAACCCATTCAAGG  900

seq1  AGGGAAGAGATCTGAGCTCTTCCAGGCTAAATCGTGAGGCAAAGTCCATT  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGGAAGAGATCTGAGCTCTTCCAGGCTAAATCGTGAGGC-AAGTCCATT  949

seq1  CTCCTGAAATTTTT-GGAGCCACTGCATTAAATGGCACGGTCATCCAGGC  999
      |||||||||||||| |||||||||||||||||||||||| |||||||| |
seq2  CTCCTGAAATTTTTGGGAGCCACTGCATTAAATGGCACGTTCATCCAGTC  999

seq1  AGAGAAGCATCCAGATC-TACCCTCCCCACCTC-TTCCACATC-TCA-CC  1045
      |||| ||||||  |||| | || || ||||||| ||||||||| ||| ||
seq2  AGAGGAGCATCAGGATCTTTCCTTCTCCACCTCTTTCCACATCTTCACCC  1049

seq1  TCCAGACAGACGGCCTAGGGTCCGTAGATATTCA--TTATAATGTCT--C  1091
      ||||||||||||||||| |||| |||||||||||  | |||  ||||  |
seq2  TCCAGACAGACGGCCTA-GGTCGGTAGATATTCACTTAATATGGTCTTCC  1098

seq1  TGGATG-ATAGGATTCTTGTTTTAGAAAATGTC-ACAAATGTTTTCATGT  1139
      |||||| |||||||||||| |||||||| |||| |||||||  |||||||
seq2  TGGATGAATAGGATTCTTGGTTTAGAAACTGTCTACAAATG--TTCATGT  1146

seq1  C-AGCTGTGGTTGTCCTTAACCAT-ACCAC  1167
      | ||||| |||||||||||||||| |||||
seq2  CAAGCTG-GGTTGTCCTTAACCATCACCAC  1175