BAC Information

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BAC

Clone NameB6Ng01-195L10
Chromosome8 (Build37)
Map Location 104,181,959 - 104,182,914
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneCdh11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195L10.bB6Ng01-195L10.g
ACCGA018056GA018057
length1,118971
definitionB6Ng01-195L10.b B6Ng01-195L10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcctgaggaataccgaatggcagagaagaacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacataatactaccagaggatccagcattacctctcctggga
atacatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaggaatgaatttatgaactttctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacagaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaaac
ttaagatacccaagatataagatacaatttattaaaggcatgaaagtcaa
gaagaacaaagaccaaagtgtggacactgtgccccttcttagaatttggg
gaacaaaacacccatggaaagagttacagagataaagtttggagctggga
tgaaaggatggaccatctaaagactgccatatccagggatccatcccata
atcaacttcccaacactgactgcatttgcatacactagcaagattttgct
gaagggacccagatatagctctctccttgtgagacagttgctcggggccc
tagccaaacaccgaaagtgatgctcaacagtcagctaatgggatggaatc
acagggcccccaattggaggagcttagtagaaatgtacctctaagtagct
taaaggggatcttgcaaccctatagttgaaacaacatattaatgaaacta
accagtaccccagaatcttctttgacctctagcttgctatatggtattta
aaaagaatggccctagta
gaattctacatactcgagaaatcgacatggcgtgaggaaaagttaatttc
agacttgcctcagtaatcagatctgctgccagctacaaattgtcacctcg
gtatattgttcattatgctattcaatcctgatgaagacactgacattcaa
aataggaataattgggcctagggctaggaggagtggggtaggatgaagag
aaagggatacatttatacctgaccttttggtatgacttgcccaaggcaca
ttgggttggtacctgcaagaactagtgaagactgaggattcaatgcaatt
taaatagtctgtcagtaaactgctggaagctaaaattaactacaacagtt
cctacaaaaagaccttcacattggagcctgaaaagcattggcaatgccag
ggatgccctggggtgggtctggcaaagcagacaccaggacgtgggaacac
tggaggaagggaggagctgcaacctgactttcaagacattccagggacaa
gtatgatggaaggccttaatataactccagatgctcaggatgagaatggt
accatgaagacagtaattggatagtttataggagatgcttttatagatga
aatcttccattccccctcctacacatggagagacagtttttattgtttct
ggtctatgaatgagatacagatttcagagtccaaacaagagtctttatat
caatttacaagaaggcatagggattttggactccacctctccctcaacaa
atccttagtcagtgaacagacattttaagaacaaattaaagtataatttt
tcctgtaatagaaatttacaaattttcagtgtgtatagttcattgacatt
taacaaacacatgcattatatataaactatttaccaatccttcattaaga
acattcctgtcaaacttggcaaaccttttcctcccatctcccataaatgt
aagcttccccttgacagccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104181959_104182914
seq2: B6Ng01-195L10.g_70_1040

seq1  GAATTCTACATACTCGAGAAATCGACATGGCGTGAGGAAAAGTTAATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATACTCGAGAAATCGACATGGCGTGAGGAAAAGTTAATTTC  50

seq1  AGACTTGCCTCAGTAATCAGATCTGCTGCCAGCTACAAATTGTCACCTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGCCTCAGTAATCAGATCTGCTGCCAGCTACAAATTGTCACCTCG  100

seq1  GTATATTGTTCATTATGCTATTCAATCCTGATGAAGACACTGACATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTGTTCATTATGCTATTCAATCCTGATGAAGACACTGACATTCAA  150

seq1  AATAGGAATAATTGGGCCTAGGGCTAGGAGGAGTGGGGTAGGATGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAATAATTGGGCCTAGGGCTAGGAGGAGTGGGGTAGGATGAAGAG  200

seq1  AAAGGGATACATTTATACCTGACCTTTTGGTATGACTTGCCCAAGGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGATACATTTATACCTGACCTTTTGGTATGACTTGCCCAAGGCACA  250

seq1  TTGGGTTGGTACCTGCAAGAACTAGTGAAGACTGAGGATTCAATGCAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTGGTACCTGCAAGAACTAGTGAAGACTGAGGATTCAATGCAATT  300

seq1  TAAATAGTCTGTCAGTAAACTGCTGGAAGCTAAAATTAACTACAACAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGTCTGTCAGTAAACTGCTGGAAGCTAAAATTAACTACAACAGTT  350

seq1  CCTACAAAAAGACCTTCACATTGGAGCCTGAAAAGCATTGGCAATGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAAAAAGACCTTCACATTGGAGCCTGAAAAGCATTGGCAATGCCAG  400

seq1  GGATGCCCTGGGGTGGGTCTGGCAAAGCAGACACCAGGACGTGGGAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCCTGGGGTGGGTCTGGCAAAGCAGACACCAGGACGTGGGAACAC  450

seq1  TGGAGGAAGGGAGGAGCTGCAACCTGACTTTCAAGACATTCCAGGGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAGGGAGGAGCTGCAACCTGACTTTCAAGACATTCCAGGGACAA  500

seq1  GTATGATGGAAGGCCTTAATATAACTCCAGATGCTCAGGATGAGAATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGATGGAAGGCCTTAATATAACTCCAGATGCTCAGGATGAGAATGGT  550

seq1  ACCATGAAGACAGTAATTGGATAGTTTATAGGAGATGCTTTTATAGATG-  599
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACCATGAAGACAGTAATTGGATAGTTTATAGGAGATGCTTTTATAGATGA  600

seq1  AATCTTCCATTCCCCCTCCTACACATGGAGAGACAG-TTTTATTGTTTCT  648
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AATCTTCCATTCCCCCTCCTACACATGGAGAGACAGTTTTTATTGTTTCT  650

seq1  GGTCTATGAATGAGATACAGATTTCAGAGTCCAAACAAGAGTCTTTATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATGAATGAGATACAGATTTCAGAGTCCAAACAAGAGTCTTTATAT  700

seq1  CAATTTACAAGAAGGCATAGGGATTTTGGACTCCACCTCTCCCTCAACAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTACAAGAAGGCATAGGGATTTTGGACTCCACCTCTCCCTCAACAA  750

seq1  ATCCTTAGTCAGTGAACAGACATTTTAAGAACAAATTAAAGTATAA-TTT  797
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCCTTAGTCAGTGAACAGACATTTTAAGAACAAATTAAAGTATAATTTT  800

seq1  TCCTGTAATAG-AATTTACAAATTTTCAGTGTGTATAGTTCAATGACATT  846
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  TCCTGTAATAGAAATTTACAAATTTTCAGTGTGTATAGTTCATTGACATT  850

seq1  TAACAAACACATGCATAATATATAAACTATT--ACAAT-CTTCATTAAGA  893
      |||||||||||||||| ||||||||||||||   |||| |||||||||||
seq2  TAACAAACACATGCATTATATATAAACTATTTACCAATCCTTCATTAAGA  900

seq1  ACATTCCTGTCAAACTT-GCAAACCTTT--CTCCCATCTCC--TAAATGT  938
      ||||||||||||||||| ||||||||||  |||||||||||  |||||||
seq2  ACATTCCTGTCAAACTTGGCAAACCTTTTCCTCCCATCTCCCATAAATGT  950

seq1  -AGCT--CCCCTGACAGCCCA  956
       ||||  ||| ||||||||||
seq2  AAGCTTCCCCTTGACAGCCCA  971