BAC Information

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BAC

Clone NameB6Ng01-196I21
Chromosome8 (Build37)
Map Location 82,971,529 - 83,119,516
singlet/doubletdoublet
Overlap geneGypa
Upstream geneLOC666378, LOC666388, LOC666392, Otud4, Tpd52-ps, Abce1, Anapc10, LOC100039439, Hhip, LOC546075
Downstream geneFrem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196I21.bB6Ng01-196I21.g
ACCGA018664GA018665
length2431,067
definitionB6Ng01-196I21.b B6Ng01-196I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,971,529 - 82,971,771)(83,118,436 - 83,119,516)
sequence
ttctttatcctttgctaaacagtcattcagaacttgtgggaaacttagac
acttaaacagtatttttttctttatttaaaactgtggtaataggaagact
tccttaggtatagccttcatttagtcactaactgtctaattaatatattt
gctgccacaagtattggtgtgtgtgtgtgtgtgtgtgtgtatgtgcgggt
gcgtgcgtgtgatcaacagccatgacagtaaagtgtagactac
gaattcagttcctagcctcaccgtcagagatggctcacagccacttcatc
tccagggggatctgatggccttttctggcctccatggaccctgcgctcat
gctcacaaacctgtacataaacatacacgtatagacgagactaaaaacaa
aacaaacaaacaaaaccaatttcaggcctgccttattgctcttcttcttt
gcccttaatttttatgacagaacaccatctagctgacagcatatgtttat
attgtttatttttatttttggttattttaaaatttttacttttattttta
tgttatgccaataagtgttttgcatgcatgtatgtctgtgcacccctgtg
tggctggtgcctgtggaggccagaagagggtgttgagttgttcagaacta
gagttgcagatagttatgagcttgcatgtgggtgttaacaatcaaacctg
ggacctctggaagagcatccactgctcttacccactgagttatctttcaa
gccccaggtaatggagttttattacaacaatagaatctctacttaagtca
ccctggagagatgaattcgtttcgactttataacaacttgaaggcattga
ttttttacctgtattctactttttttcagataaatgtgtctaaaataaga
aaaaagtctaggtttccctcaggttgaatgagcattgaatagcagagtct
ggtttagcatgagccacccaccatggtatctgcctttgcctgtgttccca
ctgctgttgttcctgggacagaactgactcagatcaggtgacaataaaga
ttggctgtttggataaaatggtaccatgcactccagacatttctaaccat
gcccaattcccccaaaacgactctgagacaattatttatgagtaaatgcc
taggtcacaggcttagggtgttcctcaactagctcatcactatataacct
gttatgctattctatctatgtgtgctacatgctgtactctcctgagtttc
atactctgctctgagtcacctgagaatttctcatgcttgactactccaga
attctttctctacaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_82971529_82971771
seq2: B6Ng01-196I21.b_51_293

seq1  TTCTTTATCCTTTGCTAAACAGTCATTCAGAACTTGTGGGAAACTTAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATCCTTTGCTAAACAGTCATTCAGAACTTGTGGGAAACTTAGAC  50

seq1  ACTTAAACAGTATTTTTTTCTTTATTTAAAACTGTGGTAATAGGAAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAACAGTATTTTTTTCTTTATTTAAAACTGTGGTAATAGGAAGACT  100

seq1  TCCTTAGGTATAGCCTTCATTTAGTCACTAACTGTCTAATTAATATATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGGTATAGCCTTCATTTAGTCACTAACTGTCTAATTAATATATTT  150

seq1  GCTGCCACAAGTATTGGTGTGTGTGTGTGTGTGTGTGTGCAAGCACACAC  200
      ||||||||||||||||||||||||||||||||||||||| | |  |    
seq2  GCTGCCACAAGTATTGGTGTGTGTGTGTGTGTGTGTGTGTATGTGCGGGT  200

seq1  GCATGCTTGTGATCAACAGCCATGACAGGATAGGGTAGACTAC  243
      || ||| ||||||||||||||||||||| | || |||||||||
seq2  GCGTGCGTGTGATCAACAGCCATGACAGTAAAGTGTAGACTAC  243

seq1: chr8_83118436_83119516
seq2: B6Ng01-196I21.g_72_1133 (reverse)

seq1  TCTTGTAGGGAGAAAGGAATTCTGGGAGTTAGTCAAGCATGAGAAAATTC  50
      |||||||  |||||| ||||||| |||| |||||||||||||| ||||||
seq2  TCTTGTA--GAGAAA-GAATTCT-GGAG-TAGTCAAGCATGAG-AAATTC  44

seq1  TCCAGGGTGACTCCAAGGAGGCAGAGTATGAAACTCAGGAGAAGTAACCA  100
      ||   ||||||||  |    ||||||||||||||||||||| ||||  ||
seq2  TC--AGGTGACTCAGA----GCAGAGTATGAAACTCAGGAG-AGTA--CA  85

seq1  GCCATGTAGCACACATAGATAGAATAGCATAAACAGGTTATATAAGTGAT  150
      | |||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  G-CATGTAGCACACATAGATAGAATAGCAT-AACAGGTTATAT-AGTGAT  132

seq1  GAGCTAGTTGAGGAACAACCCTAAGCCTGTGACCTAGGCATTTACTCATA  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGCTAGTTGAGGAAC-ACCCTAAGCCTGTGACCTAGGCATTTACTCATA  181

seq1  AATAATTGTCTCAGAGTCGTTTTGGGGGAATTGGGCATGGTTAGAAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTGTCTCAGAGTCGTTTTGGGGGAATTGGGCATGGTTAGAAATGT  231

seq1  CTGGAGTGCATGGTACCATTTTATCCAAACAGCCAATCTTTATTGTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTGCATGGTACCATTTTATCCAAACAGCCAATCTTTATTGTCACC  281

seq1  TGATCTGAGTCAGTTCTGTCCCAGGAACAACAGCAGTGGGAACACAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGAGTCAGTTCTGTCCCAGGAACAACAGCAGTGGGAACACAGGCA  331

seq1  AAGGCAGATACCATGGTGGGTGGCTCATGCTAAACCAGACTCTGCTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGATACCATGGTGGGTGGCTCATGCTAAACCAGACTCTGCTATTC  381

seq1  AATGCTCATTCAACCTGAGGGAAACCTAGACTTTTTTCTTATTTTAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCATTCAACCTGAGGGAAACCTAGACTTTTTTCTTATTTTAGACA  431

seq1  CATTTATCTGAAAAAAAGTAGAATACAGGTAAAAAATCAATGCCTTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATCTGAAAAAAAGTAGAATACAGGTAAAAAATCAATGCCTTCAAG  481

seq1  TTGTTATAAAGTCGAAACGAATTCATCTCTCCAGGGTGACTTAAGTAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATAAAGTCGAAACGAATTCATCTCTCCAGGGTGACTTAAGTAGAG  531

seq1  ATTCTATTGTTGTAATAAAACTCCATTACCTGGGGCTTGAAAGATAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTGTTGTAATAAAACTCCATTACCTGGGGCTTGAAAGATAACTC  581

seq1  AGTGGGTAAGAGCAGTGGATGCTCTTCCAGAGGTCCCAGGTTTGATTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTAAGAGCAGTGGATGCTCTTCCAGAGGTCCCAGGTTTGATTGTT  631

seq1  AACACCCACATGCAAGCTCATAACTATCTGCAACTCTAGTTCTGAACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCACATGCAAGCTCATAACTATCTGCAACTCTAGTTCTGAACAAC  681

seq1  TCAACACCCTCTTCTGGCCTCCACAGGCACCAGCCACACAGGGGTGCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACCCTCTTCTGGCCTCCACAGGCACCAGCCACACAGGGGTGCACA  731

seq1  GACATACATGCATGCAAAACACTTATTGGCATAACATAAAAATAAAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACATGCATGCAAAACACTTATTGGCATAACATAAAAATAAAAGTA  781

seq1  AAAATTTTAAAATAACCAAAAATAAAAATAAACAATATAAACATATGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTAAAATAACCAAAAATAAAAATAAACAATATAAACATATGCTG  831

seq1  TCAGCTAGATGGTGTTCTGTCATAAAAATTAAGGGCAAAGAAGAAGAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTAGATGGTGTTCTGTCATAAAAATTAAGGGCAAAGAAGAAGAGCA  881

seq1  ATAAGGCAGGCCTGAAATTGGTTTTGTTTGTTTGTTTTGTTTTTAGTCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCAGGCCTGAAATTGGTTTTGTTTGTTTGTTTTGTTTTTAGTCTC  931

seq1  GTCTATACGTGTATGTTTATGTACAGGTTTGTGAGCATGAGCGCAGGGTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATACGTGTATGTTTATGTACAGGTTTGTGAGCATGAGCGCAGGGTC  981

seq1  CATGGAGGCCAGAAAAGGCCATCAGATCCCCCTGGAGATGAAGTGGCTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGCCAGAAAAGGCCATCAGATCCCCCTGGAGATGAAGTGGCTGT  1031

seq1  GAGCCATCTCTGACGGTGAGGCTAGGAACTG  1081
      |||||||||||||||||||||||||||||||
seq2  GAGCCATCTCTGACGGTGAGGCTAGGAACTG  1062