BAC Information

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BAC

Clone NameB6Ng01-198F17
Chromosome8 (Build37)
Map Location 91,423,582 - 91,580,926
singlet/doubletdoublet
Overlap geneSall1, LOC100041089
Upstream geneZfp423, LOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985
Downstream geneEG625801, EG384862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198F17.bB6Ng01-198F17.g
ACCGA019974GA019975
length1,0861,048
definitionB6Ng01-198F17.b B6Ng01-198F17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,579,831 - 91,580,926)(91,423,582 - 91,424,621)
sequence
gaattccaaattaaatcatttaaatgaagaagtcacaccttgtcaattct
ttctccattccccccaccccttgggagtaaagggggaagatttttctgcc
aaactaatttcttaaagtaccatttctttttaaatgttctttctcctgca
tctgatgaaagaaagtgactggtctggatgatgtaagaagagtgggtcta
aagagcccggtctcagtgagaaaatgtaaacagtaaagtaacacagacag
gcaaccaaaggagtcctctcctctcttcccctgacacatgctgcagaagg
agtaggcagagcaccgtagcctcactatcctatgaaaagcagctaggcag
cgggagggcacggggaaactcctcaatggccttaaatttagactaagaag
aatacaaaatagaaaaaatatgacaatggagacttttattcccaagtcag
ctcagagaacctacagaagattgccaagcagaaacggaaagtacttactg
caggatgaaccaaccactcaagctaaaggctcttgtgcccagcatcacta
acactgggctgctgggccatttccatctgtgggggacctgccctgcgctc
tgaaggggatcagtgtcctcccctgtcttagacctttaaataccactcaa
cagttatgacggaaaaaaaaaaaagaacaaaacaacaacaaatctccaga
tgttataaactgaccctgggctagaagttacccctcagtaacagttgaaa
actgtgtctccaagcaaaggtagggaggcgggaatatggctgacagaatg
gttaatctgggctgccgagttgaatggattgagagaccagtaaaggtaca
cttctgggagtgtctatgagagtgctttccaggaggtactaactaaagag
agaaggttcaccttgaataagtggcaccgtatgggacccagacagaatta
aagtagaagcctgctaacacaggcattctctcccgctctgggttcccacc
atgatagtctaaaccatctaaacccgaacgaatcaagcctctcagatgtt
tagtctagattttgtcacagccagaaacctgactca
gaattccatgcttaggtgatgagtctgttgtactgacagtgctggctgcc
ttgtcttttctcagctgagatcctctggttctagagaggggaagacagaa
acctggctggctctaaaacctagggtgtctgagagctgaccaataagaac
cacagaaagattttgttccaatttcagccaaggaaatgcaagccctcagc
agaaaccagtagccaaatcccacacctgtcaaaggagttgcaccacactt
cctggagaaaggaaggaactggaaggaaatcagaggcctctccccaagca
ggtcctggggagatcaaagcttggtggccccagaagaagactgactgctt
ctgaggcccagaggagctactcaggggctgtgcatgtaacccttgcccca
gctcagaagagagtctaagctgagcctcccagcatataactttccccagt
ctgtcatctctaaactctccttgggtcttgttatattcctggctatgttt
agaagctcgagccaagtaatagtaactgcactttgaaaccgaggaaggat
tcctatgatgtcattaacagctgcctggagcgcctctgcaacatcctctg
gtcaggctgagttggttttccttccagagaaggaaggcactcctggggga
ggtgacctatttcaggaaacaggttctgtccctaaaagtcacataccctg
aaatcctgattcctccaggcccaagacttcctccagtctggtgccatatc
tgggccagttaaagggaagtgcccaggttaggcaagaaccttgcaggggg
aaggaggctggttgtaagcagaagaagaaacagctttaccagagggaaag
ggatcagccaaggagctttgtgctaacaggcctgtctttgggctcacact
tattccctcagttagaaaacacttctcttcacttcccaaagccagaagga
aaagttagaccacctgagctagccaggctcttgcttgactcaggaagata
ttctttggaggcgaatccagtaaattgccaatggattctattgtaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_91579831_91580926
seq2: B6Ng01-198F17.b_47_1132 (reverse)

seq1  TGAGTCAGTTTTCCTTGCTGTGACAAAATCTTAGACTAAAACAATCTGAG  50
      |||||||| ||| || |||||||||||||| |||||||||   |||||||
seq2  TGAGTCAGGTTT-CTGGCTGTGACAAAATC-TAGACTAAA--CATCTGAG  46

seq1  GAAGGCTTGGTTTCGTTTCCGGGTTTTAGATGGTTTTAGACTATCATGGT  100
        |||||| | ||||||  |||| ||||||||| ||||||||||||||||
seq2  --AGGCTT-GATTCGTT--CGGG-TTTAGATGG-TTTAGACTATCATGGT  89

seq1  GGGGAACCAGAGCGGGAGAGAATGGCTGTGTTAGCAGGCTTCCTAC-TTA  149
      ||| | |||||||||||||||||| |||||||||||||||| |||| |||
seq2  GGGAACCCAGAGCGGGAGAGAATGCCTGTGTTAGCAGGCTT-CTACTTTA  138

seq1  ATTCTGTCTGGGTCCCATACGGTGCCACTTATTCAAGGTGAACCTTCTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCTGGGTCCCATACGGTGCCACTTATTCAAGGTGAACCTTCTCT  188

seq1  CTTTAGTTAGTACCTCCTGGAAAGCACTCTCATAGACACTCCCAGAAGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTAGTACCTCCTGGAAAGCACTCTCATAGACACTCCCAGAAGTG  238

seq1  TACC-TTACTGGTCTCTCAATCCATTCAACTCGGCAGCCCAGATTAACCA  298
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTACTGGTCTCTCAATCCATTCAACTCGGCAGCCCAGATTAACCA  288

seq1  TTCTGTCAGCCATATTCCCGCCTCCCTACCTTTGCTTGGAGACACAGTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCAGCCATATTCCCGCCTCCCTACCTTTGCTTGGAGACACAGTTT  338

seq1  TCAACTGTTACTGAGGGGTAACTTCTAGCCCAGGGTCAGTTTATAACATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGTTACTGAGGGGTAACTTCTAGCCCAGGGTCAGTTTATAACATC  388

seq1  TGGAGATTTGTTGTTGTTTTGTTCTTTTTTTTTTTTCCGTCATAACTGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATTTGTTGTTGTTTTGTTCTTTTTTTTTTTTCCGTCATAACTGTT  438

seq1  GAGTGGTATTTAAAGGTCTAAGACAGGGGAGGACACTGATCCCCTTCAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGTATTTAAAGGTCTAAGACAGGGGAGGACACTGATCCCCTTCAGA  488

seq1  GCGCAGGGCAGGTCCCCCACAGATGGAAATGGCCCAGCAGCCCAGTGTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAGGGCAGGTCCCCCACAGATGGAAATGGCCCAGCAGCCCAGTGTTA  538

seq1  GTGATGCTGGGCACAAGAGCCTTTAGCTTGAGTGGTTGGTTCATCCTGCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCTGGGCACAAGAGCCTTTAGCTTGAGTGGTTGGTTCATCCTGCA  588

seq1  GTAAGTACTTTCCGTTTCTGCTTGGCAATCTTCTGTAGGTTCTCTGAGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTACTTTCCGTTTCTGCTTGGCAATCTTCTGTAGGTTCTCTGAGCT  638

seq1  GACTTGGGAATAAAAGTCTCCATTGTCATATTTTTTCTATTTTGTATTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGGAATAAAAGTCTCCATTGTCATATTTTTTCTATTTTGTATTCT  688

seq1  TCTTAGTCTAAATTTAAGGCCATTGAGGAGTTTCCCCGTGCCCTCCCGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTCTAAATTTAAGGCCATTGAGGAGTTTCCCCGTGCCCTCCCGCT  738

seq1  GCCTAGCTGCTTTTCATAGGATAGTGAGGCTACGGTGCTCTGCCTACTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGCTGCTTTTCATAGGATAGTGAGGCTACGGTGCTCTGCCTACTCC  788

seq1  TTCTGCAGCATGTGTCAGGGGAAGAGAGGAGAGGACTCCTTTGGTTGCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAGCATGTGTCAGGGGAAGAGAGGAGAGGACTCCTTTGGTTGCCT  838

seq1  GTCTGTGTTACTTTACTGTTTACATTTTCTCACTGAGACCGGGCTCTTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTTACTTTACTGTTTACATTTTCTCACTGAGACCGGGCTCTTTA  888

seq1  GACCCACTCTTCTTACATCATCCAGACCAGTCACTTTCTTTCATCAGATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACTCTTCTTACATCATCCAGACCAGTCACTTTCTTTCATCAGATG  938

seq1  CAGGAGAAAGAACATTTAAAAAGAAATGGTACTTTAAGAAATTAGTTTGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAAGAACATTTAAAAAGAAATGGTACTTTAAGAAATTAGTTTGG  988

seq1  CAGAAAAATCTTCCCCCTTTACTCCCAAGGGGTGGGGGGAATGGAGAAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAATCTTCCCCCTTTACTCCCAAGGGGTGGGGGGAATGGAGAAAG  1038

seq1  AATTGACAAGGTGTGACTTCTTCATTTAAATGATTTAATTTGGAATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACAAGGTGTGACTTCTTCATTTAAATGATTTAATTTGGAATTC  1086

seq1: chr8_91423582_91424621
seq2: B6Ng01-198F17.g_68_1115

seq1  GAATTCCATGCTTAGGTGATGAGTCTGTTGTACTGACAGTGCTGGCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCTTAGGTGATGAGTCTGTTGTACTGACAGTGCTGGCTGCC  50

seq1  TTGTCTTTTCTCAGCTGAGATCCTCTGGTTCTAGAGAGGGGAAGACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTTCTCAGCTGAGATCCTCTGGTTCTAGAGAGGGGAAGACAGAA  100

seq1  ACCTGGCTGGCTCTAAAACCTAGGGTGTCTGAGAGCTGACCAATAAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCTGGCTCTAAAACCTAGGGTGTCTGAGAGCTGACCAATAAGAAC  150

seq1  CACAGAAAGATTTTGTTCCAATTTCAGCCAAGGAAATGCAAGCCCTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGATTTTGTTCCAATTTCAGCCAAGGAAATGCAAGCCCTCAGC  200

seq1  AGAAACCAGTAGCCAAATCCCACACCTGTCAAAGGAGTTGCACCACACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAGTAGCCAAATCCCACACCTGTCAAAGGAGTTGCACCACACTT  250

seq1  CCTGGAGAAAGGAAGGAACTGGAAGGAAATCAGAGGCCTCTCCCCAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGAAAGGAAGGAACTGGAAGGAAATCAGAGGCCTCTCCCCAAGCA  300

seq1  GGTCCTGGGGAGATCAAAGCTTGGTGGCCCCAGAAGAAGACTGACTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGGGGAGATCAAAGCTTGGTGGCCCCAGAAGAAGACTGACTGCTT  350

seq1  CTGAGGCCCAGAGGAGCTACTCAGGGGCTGTGCATGTAACCCTTGCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCCAGAGGAGCTACTCAGGGGCTGTGCATGTAACCCTTGCCCCA  400

seq1  GCTCAGAAGAGAGTCTAAGCTGAGCCTCCCAGCATATAACTTTCCCCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAAGAGAGTCTAAGCTGAGCCTCCCAGCATATAACTTTCCCCAGT  450

seq1  CTGTCATCTCTAAACTCTCCTTGGGTCTTGTTATATTCCTGGCTATGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATCTCTAAACTCTCCTTGGGTCTTGTTATATTCCTGGCTATGTTT  500

seq1  AGAAGCTCGAGCCAAGTAATAGTAACTGCACTTTGAAACCGAGGAAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCGAGCCAAGTAATAGTAACTGCACTTTGAAACCGAGGAAGGAT  550

seq1  TCCTATGATGTCATTAACAGCTGCCTGGAGCGCCTCTGCAACATCCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGATGTCATTAACAGCTGCCTGGAGCGCCTCTGCAACATCCTCTG  600

seq1  GTCAGGCTGAGTTGGTTTTCCTTCCAGAGAAGGAAGGCACTCCTGGGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCTGAGTTGGTTTTCCTTCCAGAGAAGGAAGGCACTCCTGGGGGA  650

seq1  GGTGACCTATTTCAGGAAACAGGTTCTGTCCCTAAAAGTCACATACCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACCTATTTCAGGAAACAGGTTCTGTCCCTAAAAGTCACATACCCTG  700

seq1  AAATCCTGATTCCTCCAGGCCCAAGACTTCCTCCAGTCTGGTGCCATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGATTCCTCCAGGCCCAAGACTTCCTCCAGTCTGGTGCCATATC  750

seq1  T-GGCCAGTT-AAGGGAAGTGCCCAGG-TAGGCAAGAACC-TGCAGGGGG  796
      | |||||||| |||||||||||||||| |||||||||||| |||||||||
seq2  TGGGCCAGTTAAAGGGAAGTGCCCAGGTTAGGCAAGAACCTTGCAGGGGG  800

seq1  AAGGAGGCTGG-TGTAAGCAGAAGAAGAAACAGC-TTAACAGA-GGAAAG  843
      ||||||||||| |||||||||||||||||||||| ||| |||| ||||||
seq2  AAGGAGGCTGGTTGTAAGCAGAAGAAGAAACAGCTTTACCAGAGGGAAAG  850

seq1  GAACCAGCC-AGGAGCTTTGTGCTAACAGGGCTGTC-TTGGGCTCACACC  891
      | | ||||| |||||||||||||||||||| ||||| ||||||||||| |
seq2  GGATCAGCCAAGGAGCTTTGTGCTAACAGGCCTGTCTTTGGGCTCACA-C  899

seq1  TTATTCCCTCAGTTTAGAAACCAC-TCTCTTCACTCCCAAAAGCCAGAGA  940
      |||||||||||| ||||||| ||| |||||||||| || ||||||||| |
seq2  TTATTCCCTCAG-TTAGAAAACACTTCTCTTCACTTCCCAAAGCCAGA-A  947

seq1  GGAAAAAGTAGACCACCTGAGCTAGCCAGGCTCTGCTTTGACCACAGGGA  990
      ||||||  ||||||||||||||||||||||||||   |||| | || |||
seq2  GGAAAAGTTAGACCACCTGAGCTAGCCAGGCTCTTGCTTGA-CTCA-GGA  995

seq1  AGATA-TCTTTGAGGGCAGAT-CAGTAGATTG-CAATGGATTCTATTGTA  1037
      ||||| ||||||  |||  || ||||| |||| |||||||||||||||||
seq2  AGATATTCTTTGGAGGCGAATCCAGTAAATTGCCAATGGATTCTATTGTA  1045

seq1  AGT  1040
      |||
seq2  AGT  1048