BAC Information

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BAC

Clone NameB6Ng01-198I12
Chromosome8 (Build37)
Map Location 17,060,497 - 17,060,869
singlet/doubletsinglet
Overlap geneCsmd1
Upstream genenone
Downstream geneLOC665638
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198I12.bB6Ng01-198I12.g
ACCGA020102GA020103
length373409
definitionB6Ng01-198I12.b B6Ng01-198I12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taaatgtgcatatgtaattagatttagcacagtatagaggacagacataa
gcacaggtctgactcctttcctgtgttagaagccgttctgtcaaggtact
ggaggaaggattcgttttcagttcttgcttagtacctcagctcagttcca
tgcactccgatggcagttcaaaaccatctgtaactccagacctaaggggt
ctaaatccctattttgatttctcttttcaacaggaacacacatgatgcaa
tgtggcaacaggcatgcacatagtacatatacatacaggcacataaaata
ttgatacatataaaatgaatttaaaatggggatatggagggctgaggttg
acgtgggtgggagagagggggtg

aggaaagctgctactctccaccacgatcacatccctgactagagagagtg
acttcgggaaggctatcacaggcacaagtcagaattaaacctatggtggt
tgctttcaatagtcagtttgaaagtctctagtattaatcaggagataatt
ctctgggcatgtctgtgaagaagtatcaagattgagttaactaaacaaag
aagactcacccttaatgtgcaatgcaccatcccatgagctacagccccag
acccaagagaaaggacaagctggcctcagatttcatctctctctctctct
ctctctctctctctctctctctctctctctctcacacacactcactctca
caaacatcttgacactctcttttttgtatttttttttctattcatatata
taattattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_17060497_17060869
seq2: B6Ng01-198I12.b_52_424

seq1  TAAATGTGCATATGTAATTAGATTTAGCACAGTATAGAGGACAGACATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGCATATGTAATTAGATTTAGCACAGTATAGAGGACAGACATAA  50

seq1  GCACAGGTCTGACTCCTTTCCTGTGTTAGAAGCCGTTCTGTCAAGGTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGTCTGACTCCTTTCCTGTGTTAGAAGCCGTTCTGTCAAGGTACT  100

seq1  GGAGGAAGGATTCGTTTTCAGTTCTTGCTTAGTACCTCAGCTCAGTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGGATTCGTTTTCAGTTCTTGCTTAGTACCTCAGCTCAGTTCCA  150

seq1  TGCACTCCGATGGCAGTTCAAAACCATCTGTAACTCCAGACCTAAGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCCGATGGCAGTTCAAAACCATCTGTAACTCCAGACCTAAGGGGT  200

seq1  CTAAATCCCTATTTTGATTTCTCTTTTCAACAGGAACACACATGATGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCCCTATTTTGATTTCTCTTTTCAACAGGAACACACATGATGCAA  250

seq1  TGTGGCAACAGGCATGCACATAGTACATATACATACAGGCACATAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAACAGGCATGCACATAGTACATATACATACAGGCACATAAAATA  300

seq1  TTGATACATATAAAATGAATTTAAAATGGGGATATGGAGGGCTGAGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACATATAAAATGAATTTAAAATGGGGATATGGAGGGCTGAGGTTG  350

seq1  ACGTGGGTGGGAGAGAGGGGGTG  373
      |||||||||||||||||||||||
seq2  ACGTGGGTGGGAGAGAGGGGGTG  373


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