BAC Information

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BAC

Clone NameB6Ng01-199B08
Chromosome8 (Build37)13 (Build37)
Map Location 43,182,818 - 43,182,91689,164,320 - 89,165,335
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneMtus1, Fgl1, Pcm1, Asah1, Frg1, LOC100039376, Gm1815, LOC671994, Zfp353
Downstream geneEG620772, LOC628212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199B08.bB6Ng01-199B08.g
ACCGA020511GA020512
length9481,026
definitionB6Ng01-199B08.b B6Ng01-199B08.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(43,182,818 - 43,182,916)(89,164,320 - 89,165,335)
sequence
gaattctcaatgaggaataccgaatggctgagaagcacctgaaaaaatgt
tcagcatccttaatcatcagcgaaatacaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggcaaagatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcagttcctcag
aaatttggacatagtgctaacagaagattcagcattaccactgctgggca
tatacccagaagatgtttcaactggtaataaggacacatgctccactatg
ttcatagcatccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgc
agtactactcagctatttaaaagaatgaatttatgaaattcctaaccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatacaagatacaattttgcaaaacacatgaagctcaa
gaacgaagaccaaagtgtggacactttgcccccttcttagaattgggaac
aaaacacccattgaaggagttatagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatactaggggatccatcccatgatca
gctgccaaatgcagacaccatttgcatacactaacaagattttgcttgaa
aggacccagatatatctgtctcttgtgagctatgcctgggcctagcaaac
acagaagtggatgctcacagtcagctattggattggatcacagggccc

gaattcctagcatcctcatatttatctactatactttgaggcatataaga
ggtgtgatatttttatttatttatttacttacttatttacttatttgttt
gttcatattttcctttacactggttagctgcatgagtaatgttttttttg
gaacatttctcagtatcatggtatagcagtgtaaactggactctaaccat
agtgagttcaaaagaatcagtcttagttgtacaacaagacttcagggtta
ttgcataatagtagcacctgcctctaaagacagcaggggacagataataa
agattcaaaatgaaacatgacaaaagggagagggactccatacaaaccta
aaaccagttatcattcttttgcatattcttaactgtttatctttcatttt
catcacattctttcatttcccaggtttcatcttattggccaaatgagcca
aattttaaaagctaaatatattggtatgttttagatcgtatttgtagctt
gtcttgtattaatatgaaagtgactctcaagatttggcaaaggactaaac
agaatgtgcagttgattttaaataacgtcagataaaagagcctctttgtt
atgtgccctggtgtttagtgttaattttggatgaaaatctccataattag
caattacgattggacatagaagttatttccctgataatttctttcttacc
tgtagcttttgtgtttacattagttataccctggcattagatggtagaat
tgcattagacttctattctagattgtttgcactttttctctgtgctattt
cttttagttaatggggcccatccatacacattaatttccacctacattaa
ggaacacttaccttcctggggcatattctccacttctttaccaagtggct
agcttatgaattgttatgtcagtaaagatttctcatctgttctccccctt
gcttctgctttgtcagcagatggcatcaatgttacacacatcaaagtgat
attttctggtaaaggttcattgcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_43182818_43182916
seq2: B6Ng01-199B08.b_897_995 (reverse)

seq1  GCCCTGTGATCC-ATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTT  49
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  GCCCTGTGATCCAATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTT  50

seq1  GCGAGGCCCCGGCATAGTCTCACAAGAGACGGCTACCTCTGGGTCCTTTC  99
      || |||||| ||||||| |||||||||||| | ||  |||||||||||||
seq2  GCTAGGCCCAGGCATAG-CTCACAAGAGACAGATATATCTGGGTCCTTTC  99


seq1: chr13_89164320_89165335
seq2: B6Ng01-199B08.g_61_1086

seq1  GAATTCCTAGCATCCTCATATTTATCTACTATACTTTGAGGCATATAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCATCCTCATATTTATCTACTATACTTTGAGGCATATAAGA  50

seq1  GGTGTGATATTTTTATTTATTTATTTACTTACTTATTTACTTATTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGATATTTTTATTTATTTATTTACTTACTTATTTACTTATTTGTTT  100

seq1  GTTCATATTTTCCTTTACACTGGTTAGCTGCATGAGTAATGTTTTTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATATTTTCCTTTACACTGGTTAGCTGCATGAGTAATGTTTTTTTTG  150

seq1  GAACATTTCTCAGTATCATGGTATAGCAGTGTAAACTGGACTCTAACCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTCTCAGTATCATGGTATAGCAGTGTAAACTGGACTCTAACCAT  200

seq1  AGTGAGTTCAAAAGAATCAGTCTTAGTTGTACAACAAGACTTCAGGGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTCAAAAGAATCAGTCTTAGTTGTACAACAAGACTTCAGGGTTA  250

seq1  TTGCATAATAGTAGCACCTGCCTCTAAAGACAGCAGGGGACAGATAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAATAGTAGCACCTGCCTCTAAAGACAGCAGGGGACAGATAATAA  300

seq1  AGATTCAAAATGAAACATGACAAAAGGGAGAGGGACTCCATACAAACCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAAAATGAAACATGACAAAAGGGAGAGGGACTCCATACAAACCTA  350

seq1  AAACCAGTTATCATTCTTTTGCATATTCTTAACTGTTTATCTTTCATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGTTATCATTCTTTTGCATATTCTTAACTGTTTATCTTTCATTTT  400

seq1  CATCACATTCTTTCATTTCCCAGGTTTCATCTTATTGGCCAAATGAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACATTCTTTCATTTCCCAGGTTTCATCTTATTGGCCAAATGAGCCA  450

seq1  AATTTTAAAAGCTAAATATATTGGTATGTTTTAGATCGTATTTGTAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAAAGCTAAATATATTGGTATGTTTTAGATCGTATTTGTAGCTT  500

seq1  GTCTTGTATTAATATGAAAGTGACTCTCAAGATTTGGCAAAGGACTAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTATTAATATGAAAGTGACTCTCAAGATTTGGCAAAGGACTAAAC  550

seq1  AGAATGTGCAGTTGATTTTAAATAACGTCAGATAAAAGAGCCTCTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGCAGTTGATTTTAAATAACGTCAGATAAAAGAGCCTCTTTGTT  600

seq1  ATGTGCCCTGGTGTTTAGTGTTAATTTTGGATGAAAATCTCCATAATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCCTGGTGTTTAGTGTTAATTTTGGATGAAAATCTCCATAATTAG  650

seq1  CAATTACGATTGGACATAGAAGTTATTTCCCTGATAATTTCTTTCTTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACGATTGGACATAGAAGTTATTTCCCTGATAATTTCTTTCTTACC  700

seq1  TGTAGCTTTTGTGTTTACATTAGTTATACCCTGGCATTAGATGGTAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTTTTGTGTTTACATTAGTTATACCCTGGCATTAGATGGTAGAAT  750

seq1  TGCATTAGACTTCTATTCTAGATTGTTTGCAC-TTTTCTCTGTGCTATTT  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGCATTAGACTTCTATTCTAGATTGTTTGCACTTTTTCTCTGTGCTATTT  800

seq1  CTTTTAGTTAAT-GGGCCCATCCATACACATTAATTTCCACCTACATTAA  848
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGTTAATGGGGCCCATCCATACACATTAATTTCCACCTACATTAA  850

seq1  GGAACACTTACCTTCCTGGGGCATATTCTCCACTTC-TTACC-AGTGGCT  896
      |||||||||||||||||||||||||||||||||||| ||||| |||||||
seq2  GGAACACTTACCTTCCTGGGGCATATTCTCCACTTCTTTACCAAGTGGCT  900

seq1  AGCTTATGAA-TGTTATGTCAGTAAAGATTTCTCATCTGTTCTCCCCC-T  944
      |||||||||| ||||||||||||||||||||||||||||||||||||| |
seq2  AGCTTATGAATTGTTATGTCAGTAAAGATTTCTCATCTGTTCTCCCCCTT  950

seq1  GC-TCTGCTTTGTCAGCAGATGGCATCAATG-TACACACATCAAAGTGAT  992
      || |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCTTCTGCTTTGTCAGCAGATGGCATCAATGTTACACACATCAAAGTGAT  1000

seq1  A-TTTCTGGAAAGGGTTCA-TGCTTG  1016
      | ||||||| || |||||| ||||||
seq2  ATTTTCTGGTAAAGGTTCATTGCTTG  1026


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