BAC Information

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BAC

Clone NameB6Ng01-200O07
Chromosome8 (Build37)
Map Location 101,754,190 - 101,755,286
singlet/doubletsinglet
Overlap geneCdh8
Upstream genenone
Downstream geneA330008L17Rik, LOC667531, LOC100042069, LOC436054, LOC100042078
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200O07.bB6Ng01-200O07.g
ACCGA021822GA021823
length1,2051,109
definitionB6Ng01-200O07.b B6Ng01-200O07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaacagaggagttttgagtgtctgagaagaaacattcaaagcc
cttaatgatcagagaaatgcaaatcaaaacaaccctcagattccacctta
tagaatggttaagctcaaaacctcaggtgacaacacatattggccaggat
gtggagaaagagaaacactcttccattgctggtgggtttgaacactgtta
catccactctggaaatcaagctggaggctcctcaaaaaatttgaaataga
tctacctaaaaacatagcaataccactcttggggataaacccaaaagatg
ctccacaatgccacaggagcacatgttccactatcttcatagcagcctta
tctgtgatagccagaagctggaaagaaccaaatatcccacaacagaaaga
ctagatacagaaaatgtggttcatttacacaatggaatactacatagcta
ttaagaatgagtacatcctaagttttgcaggcaaatggatggaactagaa
aatatcctgagtgagaccaaaaagacacacatggtatgtactctctaata
aatggatattaaccaaaacaataaaaaagtacagaatacccaggacacaa
ttcacagaatgcaaaaagtttaacaagctgaagggcccaattgaggatgc
cctaataccacttgagagagagaagaaacaaatcacaggaaaggagaggg
tcagaaggacctgggtgggaaaggtgacagagaggggaagagagaaacat
gatacgttattgggtgggtggaaaggactgaaggcctgaggcccagcaga
aagaatggaaagaggcaaccttgggaggtaagaggttaggagaaccctcc
agaatgtaccagagaccttgggacttgaagactctcaggacttaaaggga
tggaccttagatgaaatgtcctacagtcgggattgtagagcccacctcta
acagaaggacagggcatcaagtggagggataaggtttccatacaaccatc
aaaactctgaccataccttgttccttgtctgaaagaactgcaggttggaa
atggagaggtgtcttgagtaaaataaggtccagggacaggtcctaaatgg
aattcagcttcatggggaaggccctaaggccctgacactatactaaggct
atgactactaatatggaacttcatgacgtggattgaagatacctacaaca
gacgc
gaattctttcttgggatttcttctatgcacatgtctatgccaaactatgt
ctatgacatttccttaggatttgtttcagggtaatctctcttgaaaacct
gcccatgaccactctgtgctagaccaaaagaggggcccatgcttgctgct
cctctattcgcttgagttcctgagtcaatatatatgttgccttctctttt
gttccccacaaaactctctgcttctttagtacacggacttttcattagca
tatatgctgccattcaggagaggtctatgtgtgcagttgttataaaacat
gtgagaagaggttttctttctgttatccatgggtctaattacctgagcta
gctgattaattggtgattcctctgttattttatattctgagaagttaagt
gtgatagactaaaatattcctttgatatttatgttctggcttttacagca
gacaacttttcaaagtacattcagttgtacttcagcaaaactcaagtgct
acatgctgtattatattattaaccttttgtttcatatttctttgatatgg
ttcctttgcacattccttaagctcacagaagtctaatagatatctttctg
atgaaagctacaaaggcatcttaaataatagagactagaaatgctatctt
aatccactatttcaacctggtagtactatttcttataaaatatttgctgt
agaagttctaacaaagcagtttgccttccacatttagggatttctttatt
tcctatgggttcatgtatgatatacctgacaaaatttagtaactgggaaa
gaattataatcctttccttactgttttatactcactttatttctgtctct
tctctctcttttaaactaggtacatctgtcactaatgtaacttgccactg
atgctgacgacccagtttatgggaaacagtgcaaagttggtttacagtat
cttggagggacagccgtattttttccattgagcctgaaaccaggttgtga
cttaaattttataatcctatttaatggtgtctttgcttcaggcaaacact
attaggaactggcttatgaaatgtttctgggctaattattcacttcactc
tacccaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_101754190_101755286
seq2: B6Ng01-200O07.g_67_1175 (reverse)

seq1  TTTTTGGTAGAGTGAGTGGAATATTTAG-CCAG-AACATTTCATAAACCA  48
      |||| ||||||||||   ||||| |||| |||| |||||||||||| |||
seq2  TTTTGGGTAGAGTGAAGTGAATAATTAGCCCAGAAACATTTCATAAGCCA  50

seq1  GTTCCTAATAAGTGTTTCCCTGAAGCAAA-ACA-CATTAAATAGAATT-T  95
      ||||||||| ||||||| ||||||||||| ||| |||||||||| ||| |
seq2  GTTCCTAAT-AGTGTTTGCCTGAAGCAAAGACACCATTAAATAGGATTAT  99

seq1  AAAATTTAAGTCACAAACCTGTTTCAGGCTCAATGG-AAAAATACGGCTG  144
      |||||||||||||||| |  |||||||||||||||| |||||||||||||
seq2  AAAATTTAAGTCACAACCTGGTTTCAGGCTCAATGGAAAAAATACGGCTG  149

seq1  TCCCTCCAAGATACTGTAAACCAACTTTGCACTGTTT-CCATAAACTGGG  193
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCCTCCAAGATACTGTAAACCAACTTTGCACTGTTTCCCATAAACTGGG  199

seq1  TCGTCAGCATCAGTGGC-AGTTACATTAGTGACAGATGTACCTAGTTTAA  242
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCGTCAGCATCAGTGGCAAGTTACATTAGTGACAGATGTACCTAGTTTAA  249

seq1  AAGAGAGAG-AGAGACAGAA--TAAGTGAGTAT-AAACAGTAAGGAAAGG  288
      ||||||||| ||||||||||   |||||||||| ||||||||||||||||
seq2  AAGAGAGAGAAGAGACAGAAATAAAGTGAGTATAAAACAGTAAGGAAAGG  299

seq1  ATTATAATTCTTTCCCAGTTACTAAATTTTGTCAGGTATATCATACATGA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATTCTTTCCCAGTTACTAAATTTTGTCAGGTATATCATACATGA  349

seq1  ACCCATAGGAAATAAAGAAATCCCTAAATGTGG-AGGCAAACTGCTTTGT  387
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACCCATAGGAAATAAAGAAATCCCTAAATGTGGAAGGCAAACTGCTTTGT  399

seq1  TAGAACTTCTACAGCAAATATTTTATAAGAAATAGTACTACCAGGTTGAA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTTCTACAGCAAATATTTTATAAGAAATAGTACTACCAGGTTGAA  449

seq1  ATAGTGGATTAAGATAGCATTTCTAGTCTCTATTATTTAAGATGCCTTTG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGATTAAGATAGCATTTCTAGTCTCTATTATTTAAGATGCCTTTG  499

seq1  TAGCTTTCATCAGAAAGATATCTATTAGACTTCTGTGAGCTTAAGGAATG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTCATCAGAAAGATATCTATTAGACTTCTGTGAGCTTAAGGAATG  549

seq1  TGCAAAGGAACCATATCAAAGAAATATGAAACAAAAGGTTAATAATATAA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGGAACCATATCAAAGAAATATGAAACAAAAGGTTAATAATATAA  599

seq1  TACAGCATGTAGCACTTGAGTTTTGCTGAAGTACAACTGAATGTACTTTG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCATGTAGCACTTGAGTTTTGCTGAAGTACAACTGAATGTACTTTG  649

seq1  AAAAGTTGTCTGCTGTAAAAGCCAGAACATAAATATCAAAGGAATATTTT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGTCTGCTGTAAAAGCCAGAACATAAATATCAAAGGAATATTTT  699

seq1  AGTCTATCACACTTAACTTCTCAGAATATAAAATAACAGAGGAATCACCA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATCACACTTAACTTCTCAGAATATAAAATAACAGAGGAATCACCA  749

seq1  ATTAATCAGCTAGCTCAGGTAATTAGACCCATGGATAACAGAAAGAAAAC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCAGCTAGCTCAGGTAATTAGACCCATGGATAACAGAAAGAAAAC  799

seq1  CTCTTCTCACATGTTTTATAACAACTGCACACATAGACCTCTCCTGAATG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCACATGTTTTATAACAACTGCACACATAGACCTCTCCTGAATG  849

seq1  GCAGCATATATGCTAATGAAAAGTCCGTGTACTAAAGAAGCAGAGAGTTT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATATATGCTAATGAAAAGTCCGTGTACTAAAGAAGCAGAGAGTTT  899

seq1  TGTGGGGAACAAAAGAGAAGGCAACATATATATTGACTCAGGAACTCAAG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGAACAAAAGAGAAGGCAACATATATATTGACTCAGGAACTCAAG  949

seq1  CGAATAGAGGAGCAGCAAGCATGGGCCCCTCTTTTGGTCTAGCACAGAGT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATAGAGGAGCAGCAAGCATGGGCCCCTCTTTTGGTCTAGCACAGAGT  999

seq1  GGTCATGGGCAGGTTTTCAAGAGAGATTACCCTGAAACAAATCCTAAGGA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGGCAGGTTTTCAAGAGAGATTACCCTGAAACAAATCCTAAGGA  1049

seq1  AATGTCATAGACATAGTTTGGCATAGACATGTGCATAGAAGAAATCCCAA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATAGACATAGTTTGGCATAGACATGTGCATAGAAGAAATCCCAA  1099

seq1  GAAAGAATTC  1097
      ||||||||||
seq2  GAAAGAATTC  1109