BAC Information

Click to search

BAC

Clone NameB6Ng01-201F07
Chromosome8 (Build37)
Map Location 90,244,451 - 90,430,627
singlet/doubletdoublet
Overlap geneZfp423
Upstream geneSiah1a, ENSMUSG00000074178, BC004022, LOC666960, EG625298, EG330819, Cbln1, LOC100040294, 4933402J07Rik
Downstream geneLOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201F07.bB6Ng01-201F07.g
ACCGA022137GA022138
length9381,107
definitionB6Ng01-201F07.b B6Ng01-201F07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,244,451 - 90,245,388)(90,429,521 - 90,430,627)
sequence
gaattctatgcttctaccctgaacagaaaggtaaagctactcattcttcc
aacatacaaaagcaatagctgaaatgatccctcctttcattgctgggata
ttaactttctcctatttctgcaaatttgctgcgctcatatttccctgcag
cccccaaattaaacacacgtctaatctctcacttcaggtgcactaagtgt
ggtatagggcacaaatgaatagttttattgataataaattttataatcca
tgcagcactttgctgaaaatggatgtgttctggatgcattcattatttct
cctaattcaaagaccacaggattgcagcctccccgcttgcaatgcctctg
ataattgctggctatttcctactggcctgaggttccgctgacaacacagg
cacacgccctgcattaggaagagaaatgacaaacagtccatcagattatt
actcctttcaatttcagagatcatctggcattggtcagtagcttctgtct
cctgcagatagaaacacccagccagccagcttggtgggactgtgacaaac
ggggggtggggggatataacatataacacccggctaaggtaatgtgcgcg
tgctccccagcctgcaggagaaacacccagaaaaagccatctaggaagtg
agctgtctgcagttgtgaggggagatacatgggaagcaataaacaatggt
ggtgaactttggacttgtttgaaaagcaagatggttcagacaggcgttcg
tcctcagctaggcctgaccgctgtccagactgacgtgacccttagacaag
ctaactttctgactgcatgcgtcttcacctgagaaacaggtaaaataact
tgtccccaagcggacaggaggatgtgagataatattctgtgctggggtcg
ttagcactcacgctattgttccttgactgtcttgagat
gaattcagctcctcctaggcctctctgttcctgtagaccccatactggat
gctgggcatggccagaggtcttggttgtagtgatgttagatctcataaac
gtgttactggggaggtctctagaaagcgtcacttccggatgatgggtagt
ccccatggtatgctgctaagctctgacatttcattgattggccatccctg
acatgcttagctcacatgggttctttgtgcctttgcaatagaattctagt
ttaaggatatgggggctcatatcctggggtccttgccccccccagaacag
tccccccagttccccagtcagcacctggtatattttcttttctgttcctg
ctgtccttgttggtcatgttggaaaagcaaactggagtgcagagactggc
caggttggaagccatgttctcacagctttggacagtactgagccttaagt
aggatgggacaggtggagcctatctccttctcattaagaattctcttcct
cctacccctgtagtcccgggtctccaggacagagtagttctaggtccctt
gcccccacgaggtaggatttgggagatgtgctcatgtttgctttctttta
tagctgatgctggcttttcttgtgtgaccatcctccaggtcaggggcttg
ggaactcaacagccttgagtagacttgaggacaggactagtgaggaccac
agccagcctgctccctcttctcactgggtgacttctcagcatactgtctc
ccttgcatttgagctggctaggattctagacgtgctcttggtgccgtggt
ttatagaggacctctttttgtcgtggactaccttgagttggggcctaaac
aattggcacaggctctcgttaactgtgagaactttaggtgctccccagcc
cgaggagcactgagaaccagtgaacacccagcttttccagttattcaagg
gaaagagaaggtggggtggcctcagtcccttcagcgtgcatgtgtgcaga
gctgcatagccttgtcatctgaaaacatgtgtgcacatttttgacctaaa
ccaaagttcattacaggtcataccagcttattatattatgtgtcccagac
ttgactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_90244451_90245388
seq2: B6Ng01-201F07.b_45_982

seq1  GAATTCTATGCTTCTACCCTGAACAGAAAGGTAAAGCTACTCATTCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCTTCTACCCTGAACAGAAAGGTAAAGCTACTCATTCTTCC  50

seq1  AACATACAAAAGCAATAGCTGAAATGATCCCTCCTTTCATTGCTGGGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACAAAAGCAATAGCTGAAATGATCCCTCCTTTCATTGCTGGGATA  100

seq1  TTAACTTTCTCCTATTTCTGCAAATTTGCTGCGCTCATATTTCCCTGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTCTCCTATTTCTGCAAATTTGCTGCGCTCATATTTCCCTGCAG  150

seq1  CCCCCAAATTAAACACACGTCTAATCTCTCACTTCAGGTGCACTAAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAATTAAACACACGTCTAATCTCTCACTTCAGGTGCACTAAGTGT  200

seq1  GGTATAGGGCACAAATGAATAGTTTTATTGATAATAAATTTTATAATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAGGGCACAAATGAATAGTTTTATTGATAATAAATTTTATAATCCA  250

seq1  TGCAGCACTTTGCTGAAAATGGATGTGTTCTGGATGCATTCATTATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCACTTTGCTGAAAATGGATGTGTTCTGGATGCATTCATTATTTCT  300

seq1  CCTAATTCAAAGACCACAGGATTGCAGCCTCCCCGCTTGCAATGCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTCAAAGACCACAGGATTGCAGCCTCCCCGCTTGCAATGCCTCTG  350

seq1  ATAATTGCTGGCTATTTCCTACTGGCCTGAGGTTCCGCTGACAACACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGCTGGCTATTTCCTACTGGCCTGAGGTTCCGCTGACAACACAGG  400

seq1  CACACGCCCTGCATTAGGAAGAGAAATGACAAACAGTCCATCAGATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCCCTGCATTAGGAAGAGAAATGACAAACAGTCCATCAGATTATT  450

seq1  ACTCCTTTCAATTTCAGAGATCATCTGGCATTGGTCAGTAGCTTCTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTCAATTTCAGAGATCATCTGGCATTGGTCAGTAGCTTCTGTCT  500

seq1  CCTGCAGATAGAAACACCCAGCCAGCCAGCTTGGTGGGACTGTGACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGATAGAAACACCCAGCCAGCCAGCTTGGTGGGACTGTGACAAAC  550

seq1  GGGGGGTGGGGGGATATAACATATAACACCCGGCTAAGGTAATGTGCGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTGGGGGGATATAACATATAACACCCGGCTAAGGTAATGTGCGCG  600

seq1  TGCTCCCCAGCCTGCAGGAGAAACACCCAGAAAAAGCCATCTAGGAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCAGCCTGCAGGAGAAACACCCAGAAAAAGCCATCTAGGAAGTG  650

seq1  AGCTGTCTGCAGTTGTGAGGGGAGATACATGGGAAGCAATAAACAATGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTGCAGTTGTGAGGGGAGATACATGGGAAGCAATAAACAATGGT  700

seq1  GGTGAACTTTGGACTTGTTTGAAAAGCAAGATGGTTCAGGACAGGGGTTC  750
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  GGTGAACTTTGGACTTGTTTGAAAAGCAAGATGGTTCA-GACAGGCGTTC  749

seq1  GTCATCAGCTAGGCCTGACCGCTGTCCCAGACTGACGTGACCCTTAGACA  800
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTCCTCAGCTAGGCCTGACCGCTGT-CCAGACTGACGTGACCCTTAGACA  798

seq1  AGCTAACTTTCTGACTGCATGCTTCCTCACCTGAGAAACAGGTAAAATAA  850
      |||||||||||||||||||||| || ||||||||||||||||||||||||
seq2  AGCTAACTTTCTGACTGCATGCGTCTTCACCTGAGAAACAGGTAAAATAA  848

seq1  CTTGTCCCCAAGGGGACAGGAGGATGGTAGATAGTA-TCTGTGCTGTGGC  899
      |||||||||||| |||||||||||||  ||||| || ||||||||| || 
seq2  CTTGTCCCCAAGCGGACAGGAGGATGTGAGATAATATTCTGTGCTGGGGT  898

seq1  TGTTAGCACTCACGCTATAGCTAC-TGACTGTCTTGAGAT  938
       ||||||||||||||||| | | | |||||||||||||||
seq2  CGTTAGCACTCACGCTATTGTTCCTTGACTGTCTTGAGAT  938

seq1: chr8_90429521_90430627
seq2: B6Ng01-201F07.g_69_1175 (reverse)

seq1  CAGTCCCAGTCTGGAACACATAATAATATTAAAGCTGGGTTATGGACTTT  50
      |||| | ||||||| ||||||||||  ||  |||||||  ||||  |  |
seq2  CAGT-CAAGTCTGGGACACATAATATAAT--AAGCTGG--TATGACC--T  43

seq1  GTAAATGGAACTTT-GTTTAAGTCAAAAATGTGCACACATGTTTTTCAGA  99
      ||||   ||||||| ||||| |||||||||||||||||||| ||||||||
seq2  GTAA--TGAACTTTGGTTTAGGTCAAAAATGTGCACACATG-TTTTCAGA  90

seq1  TTTAACAGGCTCTGCAGCTCTGCACACATGCACGCTGAAGGGACCTGA-G  148
       | |  ||||| ||||||||||||||||||||||||||||||| |||| |
seq2  -TGACAAGGCTATGCAGCTCTGCACACATGCACGCTGAAGGGA-CTGAGG  138

seq1  CCA-CCCACC-TCTCTTT-CCTTG-ATAACTGGAAAAGCTGGGTGTTCAC  194
      ||| |||||| ||||||| ||||| |||||||||||||||||||||||||
seq2  CCACCCCACCTTCTCTTTCCCTTGAATAACTGGAAAAGCTGGGTGTTCAC  188

seq1  T-GTTCTCAGTGCTCCTC-GGCTGGGGAGCACCTAAAG-TCTCACAGTTA  241
      | |||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  TGGTTCTCAGTGCTCCTCGGGCTGGGGAGCACCTAAAGTTCTCACAGTTA  238

seq1  ACGAGAGCCTGTGCCAAT--GTTAGGCCCCAACTCAAGGTAGTCCACGAC  289
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  ACGAGAGCCTGTGCCAATTGTTTAGGCCCCAACTCAAGGTAGTCCACGAC  288

seq1  -AAAAGAGGTCCTCTATAAACCACGGCACCAAGAGCACGTCTAGAATCCT  338
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGGTCCTCTATAAACCACGGCACCAAGAGCACGTCTAGAATCCT  338

seq1  AGCCAGCTCAAATGCAAGGGAGACAGTATGCTGAGAAGTCACCCAGTGAG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCTCAAATGCAAGGGAGACAGTATGCTGAGAAGTCACCCAGTGAG  388

seq1  AAGAGGGAGCAGGCTGGCTGTGGTCCTCACTAGTCCTGTCCTCAAGTCTA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAGCAGGCTGGCTGTGGTCCTCACTAGTCCTGTCCTCAAGTCTA  438

seq1  CTCAAGGCTGTTGAGTTCCCAAGCCCCTGACCTGGAGGATGGTCACACAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGCTGTTGAGTTCCCAAGCCCCTGACCTGGAGGATGGTCACACAA  488

seq1  GAAAAGCCAGCATCAGCTATAAAAGAAAGCAAACATGAGCACATCTCCCA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCCAGCATCAGCTATAAAAGAAAGCAAACATGAGCACATCTCCCA  538

seq1  AATCCTACCTCGTGGGGGCAAGGGACCTAGAACTACTCTGTCCTGGAGAC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTACCTCGTGGGGGCAAGGGACCTAGAACTACTCTGTCCTGGAGAC  588

seq1  CCGGGACTACAGGGGTAGGAGGAAGAGAATTCTTAATGAGAAGGAGATAG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGACTACAGGGGTAGGAGGAAGAGAATTCTTAATGAGAAGGAGATAG  638

seq1  GCTCCACCTGTCCCATCCTACTTAAGGCTCAGTACTGTCCAAAGCTGTGA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACCTGTCCCATCCTACTTAAGGCTCAGTACTGTCCAAAGCTGTGA  688

seq1  GAACATGGCTTCCAACCTGGCCAGTCTCTGCACTCCAGTTTGCTTTTCCA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGCTTCCAACCTGGCCAGTCTCTGCACTCCAGTTTGCTTTTCCA  738

seq1  ACATGACCAACAAGGACAGCAGGAACAGAAAAGAAAATATACCAGGTGCT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACCAACAAGGACAGCAGGAACAGAAAAGAAAATATACCAGGTGCT  788

seq1  GACTGGGGAACTGGGGGGACTGTTCTGGGGGGGGCAAGGACCCCAGGATA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGGAACTGGGGGGACTGTTCTGGGGGGGGCAAGGACCCCAGGATA  838

seq1  TGAGCCCCCATATCCTTAAACTAGAATTCTATTGCAAAGGCACAAAGAAC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCCCATATCCTTAAACTAGAATTCTATTGCAAAGGCACAAAGAAC  888

seq1  CCATGTGAGCTAAGCATGTCAGGGATGGCCAATCAATGAAATGTCAGAGC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGAGCTAAGCATGTCAGGGATGGCCAATCAATGAAATGTCAGAGC  938

seq1  TTAGCAGCATACCATGGGGACTACCCATCATCCGGAAGTGACGCTTTCTA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGCATACCATGGGGACTACCCATCATCCGGAAGTGACGCTTTCTA  988

seq1  GAGACCTCCCCAGTAACACGTTTATGAGATCTAACATCACTACAACCAAG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTCCCCAGTAACACGTTTATGAGATCTAACATCACTACAACCAAG  1038

seq1  ACCTCTGGCCATGCCCAGCATCCAGTATGGGGTCTACAGGAACAGAGAGG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGGCCATGCCCAGCATCCAGTATGGGGTCTACAGGAACAGAGAGG  1088

seq1  CCTAGGAGGAGCTGAATTC  1107
      |||||||||||||||||||
seq2  CCTAGGAGGAGCTGAATTC  1107