BAC Information

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BAC

Clone NameB6Ng01-201L09
Chromosome8 (Build37)
Map Location 29,395,937 - 29,396,355
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC732482, Tex24, Chrnb3, Chrna6, 4921537P18Rik, Gm1698, EG666422, LOC666430
Downstream geneEG666446, LOC100042598, Unc5d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201L09.bB6Ng01-201L09.g
ACCGA022406GA022407
length1,178413
definitionB6Ng01-201L09.b B6Ng01-201L09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagtagtactccattgtgtaaatgtacc
tcattttctgtatccattcttttgttgagggacatctgggttctttccag
cttctcgctattataaataaggttactatgagcatagtgaaacatgtgtc
cttattacaagttggagcatcttctgggtatatgcccaggagtggtatag
ctgggtcctctggtagtactatgctcaatgttctgccaaactgccaaact
gatttccagagtggttgtaccagtttgtaatcccaccaacaatagaggag
tgttcctcattttctacatcctcaccagcatctgctgtctcttgagtttt
tgatcttagccattctgactggtgtgaggtggaatctcagggttgtttgg
atttgcatttccctgttgactaaggatgttaaatatttctttggatgctt
ctcagcaatttggcattcctcagttgagaattttttgtttagctatgttc
cccccctccccttttatttttgaggcagggtttctctgtgtagccctggc
tgtcctggaactcactttgtagtgcaggttggcctcaaactcagaaattc
gcctgcctctgcctcccaagtgctgggattaaacgtatgtgccaccacca
cccggcagttccccattttttaatagggttatttggttctctggagtcta
actttcttgagttctttgtatgtattgggtatgagccctctatcagatgt
aagattgatacagatcttttcccaatttgctggtttgccaatttgtccta
ttgacagtatccttttgccttacagaagctttgtaattttctgaggcccc
atttgtcaattcttgatcttagagcataagatattggagttctgttcagg
aaaatttcccctgttgcccatatattcaaggttcttccctacttcttttc
ttttagtttacagtgtgtatagttttaatgtggagatccttgatctactt
ggactggagcttgatacaagagataaaatgaatccattgcatcttctgca
tgctaacagcagtcgagcagcacatttgttgaaattctgtctttttcact
ggatgtttagcttcttgtaaagatcagtgaaccatgagggtgtggttgcc
tcaattcccggacttcaatcctcatttg

ttctgagaccccaacagctgacgcttccagaaagctttagctgacaccat
tgcatacactagcaagattttactgaaaggacccagatatagctctctct
tgtgagactatgccggggcctagcaaacacagaagtggatgatcacagtc
agctattggatgggtcacacggcccccaatggaggagctagagaaattac
ccaaggagctaatgggaactgcaaccgtataggtggaacaacaatatgaa
ctaaccagtacccgggagctcttgtctctaactgcatatgtatcaaaaga
tggcctagtccgccatcactgcaaagagaggcccattggacttacaaact
ttatatgccccagtacaggggaacgccagggccaaaaagggggagtgggt
gggtaggggattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_29395937_29396355
seq2: B6Ng01-201L09.g_65_483

seq1  GAATTCTTCTGAGACCCCAACAGCTGACGCTTCCAGAAAGCTTTAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGAGACCCCAACAGCTGACGCTTCCAGAAAGCTTTAGCTGA  50

seq1  CACCATTGCATACACTAGCAAGATTTTACTGAAAGGACCCAGATATAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTGCATACACTAGCAAGATTTTACTGAAAGGACCCAGATATAGCT  100

seq1  CTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGATC  150

seq1  ACAGTCAGCTATTGGATGGGTCACACGGCCCCCAATGGAGGAGCTAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAGCTATTGGATGGGTCACACGGCCCCCAATGGAGGAGCTAGAGA  200

seq1  AATTACCCAAGGAGCTAATGGGAACTGCAACCGTATAGGTGGAACAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCCAAGGAGCTAATGGGAACTGCAACCGTATAGGTGGAACAACAA  250

seq1  TATGAACTAACCAGTACCCGGGAGCTCTTGTCTCTAACTGCATATGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACTAACCAGTACCCGGGAGCTCTTGTCTCTAACTGCATATGTATC  300

seq1  AAAAGATGGCCTAGTCCGCCATCACTGCAAAGAGAGGCCCATTGGACTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGGCCTAGTCCGCCATCACTGCAAAGAGAGGCCCATTGGACTTA  350

seq1  CAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGA  400

seq1  GTGGGTGGGTAGGGGATTG  419
      |||||||||||||||||||
seq2  GTGGGTGGGTAGGGGATTG  419


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