BAC Information

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BAC

Clone NameB6Ng01-202C14
Chromosome8 (Build37)
Map Location 105,377,163 - 105,549,772
singlet/doubletdoublet
Overlap geneEG667618, LOC100041368
Upstream geneCdh11
Downstream gene1600027J07Rik, LOC100041397
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202C14.bB6Ng01-202C14.g
ACCGA022732GA022733
length1,1431,001
definitionB6Ng01-202C14.b B6Ng01-202C14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,548,630 - 105,549,772)(105,377,163 - 105,378,160)
sequence
gaattccaagacttcaagtttgtctgaaagactttctgtatcactgggca
agagaaattcccattgttagctcatattcaatctgaagggcagagatgta
tgagaccgatcttgataaaacatgggttttaggaaacatgatttattgaa
ggtcattaatacaataatctataatggtgatttttcaaacccaggtctgt
tggttttgaagaaaattcttttcttcctatcaaatcaggttgataaataa
tatatccttatttgcatgttaatatagttgatgcttttgttattaatttc
ctttctagacctaaaatgcataaaccaatcatgtaacttaagcagggaca
aacttttggatatttccttcattttatttatattttaactttcctccctc
actttaggtttaaaaaagtgaagaagagatttcaatttcatactacctaa
caataaaactctattccatctaactgggagaagtttaatcatggtatttc
caattacctatagtaaactgattctttcaaaagtaatcagagtagtataa
tttaaaccatgtaaacattccttatgaaaatcaacacctaaggaactgac
atagcatcaggcaggcccaccacacctgatttgtacagaagaaaagtttc
tataagtgaagacataaaggcctgttagtttgggttccagccaatgtatc
tgcagatcagagatagtacatacagcctagagaaagaaatcttatatgag
ccaatatataatttatttatatcatatgcatgtatgtatcgagatataca
tttttctttatcatcacttttaggagttttataatactaaaattttactt
ttggagtccatattttagtaattatcacaaaatggaatattatccctgac
tttgtttttaactgacttatcctctaataaatgctatggcacttgcaggt
gtttcttggaactcaaaattgacctcacaattagatcctgaatgtcttag
cagcaacccttaccttgatgaatggtctgattgatttgatctcccagttc
tgaaaggcaaatggctggactcaatgctctgtgatgaaggggcttgcaac
gaaggttgcaactgactgccaatctttgatgcctgtcagtgag
gaattcaactcccaatgactctgttccacatttagcaaacagtcttgtgt
ggtgtttgcctttgtgtccccactggagcttattggagggatcggagcct
gcaaatgaggtaggtcattgcgcatggtcagagggctcaggattacagct
cctctgctctaacgcacccaaaaccctaggttcaggcctcaaaatgataa
cgtcttcattgttttcctattgctgcggggaaagaaactgacaaaaaaac
aacttaagagagaaaatggtttttggttttttgtttgtttgtttgtttgt
tttggttttttgttttggtttttggtttcaatttaaggataaagtccacc
gtggccagaaatccagaggcaggaacttgagctagaggatcacattatat
tgctagacaggaagcagagaatgatgaagacaggcccttagaacattgtc
tccgtttgatttaatccaggatgccacgccagggaatggtgccgcttcta
gagggtatttgcacatcgattaaccctgtcaagacaatgccacatgcatg
cccaggagtgaaatagaccctttacagttgtatgggaggtagttccagac
tttgttaagttgacagtattagccactacaaataatattttaaaaatgtc
cactaatgtgaatcttcttaactcaatggtagtttgactgagggtcatcc
ctgtaaattggtggataaaacatgttttcactatttaatgaaagccaatg
gaagtgcactagtttatattgccagggacaacattttaaacctactctta
atatccagtattgtccaaatgtttggcttagagagacacatcattggaac
cttgtctggattactgagtccttctattttcaaggaatattctaaatcta
ccttgcattaaaccaggcctctaaccaccattcgttactgtagcctatgc
attctgttctccaatccgcaagcctagggtctctgctcttgaccctcatc
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_105548630_105549772
seq2: B6Ng01-202C14.b_49_1191 (reverse)

seq1  CTCACTGACA-GCATC-AAGATTGGCAGTCAGTTGCAACCCTTCGGTTGC  48
      |||||||||| ||||| ||||||||||||||||||||| ||||| |||||
seq2  CTCACTGACAGGCATCAAAGATTGGCAGTCAGTTGCAA-CCTTC-GTTGC  48

seq1  AAGGCCCCCTCATCACAGAGCATTGAGTCCAGCCCTTTGCC-TTCAG-AC  96
      || ||||| ||||||||||||||||||||||||| |||||| ||||| ||
seq2  AA-GCCCCTTCATCACAGAGCATTGAGTCCAGCCATTTGCCTTTCAGAAC  97

seq1  TGGGGAAGATCAAATCAATCAGACCATTCATCAAGGTAAGGGTGCCTGCT  146
      ||||  |||||||||||||||||||||||||||||||||||||  |||||
seq2  TGGG--AGATCAAATCAATCAGACCATTCATCAAGGTAAGGGTTGCTGCT  145

seq1  AAGACATTCAGGATCTATTTGTGAGGTC-ATTTTGAGTTCCAAGAAACAC  195
      ||||||||||||||||| |||||||||| |||||||||||||||||||||
seq2  AAGACATTCAGGATCTAATTGTGAGGTCAATTTTGAGTTCCAAGAAACAC  195

seq1  CTGCAAGTGCCATAGCATTTATTAGAGGATAAGTCAGTTAAAAACAAAGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGTGCCATAGCATTTATTAGAGGATAAGTCAGTTAAAAACAAAGT  245

seq1  CAGGGATAATATTCCATTTTGTGATAATTACTAAAATATGGACTCCAAAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATAATATTCCATTTTGTGATAATTACTAAAATATGGACTCCAAAA  295

seq1  GTAAAATTTTAGTATTATAAAACTCCTAAAAGTGATGATAAAGAAAAATG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTTTAGTATTATAAAACTCCTAAAAGTGATGATAAAGAAAAATG  345

seq1  TATATCTCGATACATACATGCATATGATATAAATAAATTATATATTGGCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTCGATACATACATGCATATGATATAAATAAATTATATATTGGCT  395

seq1  CATATAAGATTTCTTTCTCTAGGCTGTATGTACTATCTCTGATCTGCAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAGATTTCTTTCTCTAGGCTGTATGTACTATCTCTGATCTGCAGA  445

seq1  TACATTGGCTGGAACCCAAACTAACAGGCCTTTATGTCTTCACTTATAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGGCTGGAACCCAAACTAACAGGCCTTTATGTCTTCACTTATAGA  495

seq1  AACTTTTCTTCTGTACAAATCAGGTGTGGTGGGCCTGCCTGATGCTATGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTTCTGTACAAATCAGGTGTGGTGGGCCTGCCTGATGCTATGT  545

seq1  CAGTTCCTTAGGTGTTGATTTTCATAAGGAATGTTTACATGGTTTAAATT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCTTAGGTGTTGATTTTCATAAGGAATGTTTACATGGTTTAAATT  595

seq1  ATACTACTCTGATTACTTTTGAAAGAATCAGTTTACTATAGGTAATTGGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTACTCTGATTACTTTTGAAAGAATCAGTTTACTATAGGTAATTGGA  645

seq1  AATACCATGATTAAACTTCTCCCAGTTAGATGGAATAGAGTTTTATTGTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCATGATTAAACTTCTCCCAGTTAGATGGAATAGAGTTTTATTGTT  695

seq1  AGGTAGTATGAAATTGAAATCTCTTCTTCACTTTTTTAAACCTAAAGTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTATGAAATTGAAATCTCTTCTTCACTTTTTTAAACCTAAAGTGA  745

seq1  GGGAGGAAAGTTAAAATATAAATAAAATGAAGGAAATATCCAAAAGTTTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAAGTTAAAATATAAATAAAATGAAGGAAATATCCAAAAGTTTG  795

seq1  TCCCTGCTTAAGTTACATGATTGGTTTATGCATTTTAGGTCTAGAAAGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTTAAGTTACATGATTGGTTTATGCATTTTAGGTCTAGAAAGGA  845

seq1  AATTAATAACAAAAGCATCAACTATATTAACATGCAAATAAGGATATATT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAACAAAAGCATCAACTATATTAACATGCAAATAAGGATATATT  895

seq1  ATTTATCAACCTGATTTGATAGGAAGAAAAGAATTTTCTTCAAAACCAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAACCTGATTTGATAGGAAGAAAAGAATTTTCTTCAAAACCAAC  945

seq1  AGACCTGGGTTTGAAAAATCACCATTATAGATTATTGTATTAATGACCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGGGTTTGAAAAATCACCATTATAGATTATTGTATTAATGACCTT  995

seq1  CAATAAATCATGTTTCCTAAAACCCATGTTTTATCAAGATCGGTCTCATA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATCATGTTTCCTAAAACCCATGTTTTATCAAGATCGGTCTCATA  1045

seq1  CATCTCTGCCCTTCAGATTGAATATGAGCTAACAATGGGAATTTCTCTTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGCCCTTCAGATTGAATATGAGCTAACAATGGGAATTTCTCTTG  1095

seq1  CCCAGTGATACAGAAAGTCTTTCAGACAAACTTGAAGTCTTGGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGATACAGAAAGTCTTTCAGACAAACTTGAAGTCTTGGAATTC  1143

seq1: chr8_105377163_105378160
seq2: B6Ng01-202C14.g_70_1070

seq1  GAATTCAACTCCCAATGACTCTGTTCCACATTTAGCAAACAGTCTTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCCCAATGACTCTGTTCCACATTTAGCAAACAGTCTTGTGT  50

seq1  GGTGTTTGCCTTTGTGTCCCCACTGGAGCTTATTGGAGGGATCGGAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTGCCTTTGTGTCCCCACTGGAGCTTATTGGAGGGATCGGAGCCT  100

seq1  GCAAATGAGGTAGGTCATTGCGCATGGTCAGAGGGCTCAGGATTACAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGAGGTAGGTCATTGCGCATGGTCAGAGGGCTCAGGATTACAGCT  150

seq1  CCTCTGCTCTAACGCACCCAAAACCCTAGGTTCAGGCCTCAAAATGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTCTAACGCACCCAAAACCCTAGGTTCAGGCCTCAAAATGATAA  200

seq1  CGTCTTCATTGTTTTCCTATTGCTGCGGGGAAAGAAACTGACAAAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTCATTGTTTTCCTATTGCTGCGGGGAAAGAAACTGACAAAAAAAC  250

seq1  AACTTAAGAGAGAAAATGGTTTTTGGTTTTTTGTTTGTTTGTTTGTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAGAGAGAAAATGGTTTTTGGTTTTTTGTTTGTTTGTTTGTTTGT  300

seq1  TTTGGTTTTTTGTTTTGGTTTTTGGTTTCAATTTAAGGATAAAGTCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTTGTTTTGGTTTTTGGTTTCAATTTAAGGATAAAGTCCACC  350

seq1  GTGGCCAGAAATCCAGAGGCAGGAACTTGAGCTAGAGGATCACATTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAGAAATCCAGAGGCAGGAACTTGAGCTAGAGGATCACATTATAT  400

seq1  TGCTAGACAGGAAGCAGAGAATGATGAAGACAGGCCCTTAGAACATTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGACAGGAAGCAGAGAATGATGAAGACAGGCCCTTAGAACATTGTC  450

seq1  TCCGTTTGATTTAATCCAGGATGCCACGCCAGGGAATGGTGCCGCTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTTTGATTTAATCCAGGATGCCACGCCAGGGAATGGTGCCGCTTCTA  500

seq1  GAGGGTATTTGCACATCGATTAACCCTGTCAAGACAATGCCACATGCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTATTTGCACATCGATTAACCCTGTCAAGACAATGCCACATGCATG  550

seq1  CCCAGGAGTGAAATAGACCC-TTACAGTTGTATGGGAGGTAGTTCCAGAC  599
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCCAGGAGTGAAATAGACCCTTTACAGTTGTATGGGAGGTAGTTCCAGAC  600

seq1  TTTGTTAAGTTGACAGTATTAGCCACTACAAATAATATTTTAAAAATGTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAAGTTGACAGTATTAGCCACTACAAATAATATTTTAAAAATGTC  650

seq1  CACTAATGTGAATCTTCTTAACTCAATGGTAGTTTGACTGAGGGTCATCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGTGAATCTTCTTAACTCAATGGTAGTTTGACTGAGGGTCATCC  700

seq1  CTGTAAATTGGTGGATAAAACATGTTTTCACTATTTAATGAAAGCCAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAATTGGTGGATAAAACATGTTTTCACTATTTAATGAAAGCCAATG  750

seq1  GAAGTGCACTAG-TTATATTGCCAGGGACAACAATTTTAAACCTACTCTT  798
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  GAAGTGCACTAGTTTATATTGCCAGGGACAAC-ATTTTAAACCTACTCTT  799

seq1  AATATCCAGTATTGTCCAAATGTTTGGCTTAGAGAGACAACATCATTGGA  848
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATATCCAGTATTGTCCAAATGTTTGGCTTAGAGAGAC-ACATCATTGGA  848

seq1  ACC-TGTCTGGAATACTGAGTCCTTCTATTTTC-AGGAATAATCTAAATC  896
      ||| |||||||| |||||||||||||||||||| ||||||| ||||||||
seq2  ACCTTGTCTGGATTACTGAGTCCTTCTATTTTCAAGGAATATTCTAAATC  898

seq1  TACCCTGCATTAAACCAGGCCTCTAACCACCAATTCCGTACTGTAGCCTA  946
      |||| |||||||||||||||||||||||||| ||||  ||||||||||| 
seq2  TACCTTGCATTAAACCAGGCCTCTAACCACC-ATTCGTTACTGTAGCCT-  946

seq1  ATGCATTCTGTTCTCCAATCCGCAAGCCTAGG--TTCTGCTCTTGA-ACT  993
      ||||||||||||||||||||||||||||||||   |||||||||||  ||
seq2  ATGCATTCTGTTCTCCAATCCGCAAGCCTAGGGTCTCTGCTCTTGACCCT  996

seq1  CATCG  998
      |||||
seq2  CATCG  1001