BAC Information

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BAC

Clone NameB6Ng01-203D16
Chromosome8 (Build37)
Map Location 30,083,247 - 30,084,380
singlet/doubletsinglet
Overlap geneUnc5d
Upstream geneEG666422, LOC666430, EG666446, LOC100042598
Downstream geneLOC100041237
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203D16.bB6Ng01-203D16.g
ACCGA023501GA023502
length1,2181,132
definitionB6Ng01-203D16.b B6Ng01-203D16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgagtatataaactgcttttggtaggatggtcatttcacaac
atcaattctctcaatccatgagcagtggaggacttttagtgtcctttctt
cagagattaaggtattggtggtaagttttcaccaattggtgacatttatt
ttttttagctatttcagtgcttttgaggctcttataaatgagagtgtttc
caagatctttctaagcacagttgggtttggcctgtaagaaagtactcagt
tttagaagtggatttttttttcctgccaccttgagaaacatgctgatcat
ttgtagaagttttctggtagaattgtgagaatctttttcttattatatat
tatctgcaaagaggtatcgatgtccttcacctaatggatggactatggaa
atgtggtccatagacctaatgatacattactcagctataaagcaaaatga
aatcataaaatttgcaggcaaatgaatagtactgggaactattatattta
gtgaagtaacctagacccagaaagataaacactacatggcctttcttatt
ggaggatcttaactcattgtccttagatctgaatatgcatcctgaagtaa
ccaaagaagccaagagattagtaagaggcagaggagaaggaagaaaaagc
accagagaggaggataatagggcacaggtactacaaatgtagaaaagaga
aaaacaagggttctgtgtgtgtatctagctgggaagagaagatagaaggt
aatacagaagtgaggaagtaagggaagacaccacaaaggaggtctgaaaa
cgtcatagagaaacaatattttatgtttgttttaaaatgggtgtatatgt
ctatacatagattaagtcgagttatattatgtgagctgtcacttcttccc
ccaagaaccatagagtacctagcaaaactcatagccacgtatgagaatct
tctctttgagttgtccccgggggcagagtgtacaagagactttcagagcg
atataggctattgcatgcccttggctgccttctagaccttgacctcagct
cagttgctggagatattcatacttgatgcagcttgagattgagctagagc
ctgactgaaactcttcctaagaacagcttctcaactatgattgctgtcta
tgccagctacagattaatatatacagcaatcgatattccatgcctttctc
tgtgtaaggctcatagct

gaattccactgatgtagagaattaaggaatcaggcacagagcagccccat
gcttgcaagaggaaaacacataacgttcaggaaacattgaataacacgtt
tattactaaaatgagtgtaatgccttataaatcagcatggaggaaagtgg
tgaaaaaaataaacattacaagttttaactggcccagtgtaccttgaagt
agttcatgtcaaaagaaaagtaatatgaatttacaactttggtgttatca
ttttctgttgttttacataatttccctattattagtctttctcttactag
tctcttcctttgttcttttcaaccttagttaagacaattaatattctaag
atctggcagtgttattgggatgcagcagcccatgaccacttcctaatgtt
tttcttaatgaattaaactaagtcatatgggtagagacatcttttgcctg
atggctattgtagaatgcgatacttatctaagtatttaaagacccactga
gttattaaaggaggaagctgccattgccataagatgaattgaggcattat
tctattttacagcaagctgtgtaatagctacataaattaacagaaaacca
gggtgcattttgtaattctgttttggacaggtaagacctttggtttgaat
caagatccgtagatttgaaatgaaatgtctagttaaacagatttcagaaa
tcaagcccagtgtagtactacaaaggatgtgagatttgtatgtttagaat
agaaaaacgtatcaatacgtttattgatatttatccccaaagcggggagt
ctctgttagaggagactatgtgcaggtttatggaatctcaccaagatccc
atcgtgaatgggttgtgtatgtggtgggggtcaggcttaggaagagggaa
tatagaagataactgtgacacctcctcacctgtgatgagatgtaagtggg
tgtcaagtaaggatgttaataagttttcttatctgggatgattgacaaag
caggacgatgttagaaaaagagacttggtttttaaactcagaaaaatgga
cagggcttgccagatcatttcccagagatgaatacctaggccacctcacc
aacgaatgatctctctccctttgcctatactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_30083247_30084380
seq2: B6Ng01-203D16.g_65_1196 (reverse)

seq1  CAGTAAAAGGCAAGGCGAGAGAGCTCATCTGGTTGGTGA-GTTGCCTAGG  49
      |||| | |||||| | ||||||| |||| | |||||||| || |||||||
seq2  CAGT-ATAGGCAAAGGGAGAGAGATCAT-TCGTTGGTGAGGTGGCCTAGG  48

seq1  TATTCTACTCTGGGAAATGATCT-GCAAAGCCTGT-CATTTTTCTTGAGT  97
      |||||  |||||||||||||||| ||||  ||||| |||||||| |||||
seq2  TATTCATCTCTGGGAAATGATCTGGCAAGCCCTGTCCATTTTTC-TGAGT  97

seq1  TTTAAAAACCAGTCTC-TTTTCTAACATCCTCTTGCTTTGTCATTCATCC  146
      || |||| | |||||| |||||||||||| || |||||||||| ||||||
seq2  TTAAAAACCAAGTCTCTTTTTCTAACATCGTCCTGCTTTGTCAATCATCC  147

seq1  CAGATTAAGAAAACTTATTAACATCCTTACTTTGACACCCACTTACATCT  196
      |||| ||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAGA-TAAGAAAACTTATTAACATCCTTAC-TTGACACCCACTTACATCT  195

seq1  CATCACAGGTGA-GAGTTGTCACAGTTATCTTCTATTATTCCCTCTTTCC  245
      |||||||||||| ||| |||||||||||||||||| ||||||||| ||||
seq2  CATCACAGGTGAGGAGGTGTCACAGTTATCTTCTA-TATTCCCTC-TTCC  243

seq1  TAAGCCTGACCCCCACCACATACACAACCCATTCACGATGGGATCTTGGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTGACCCCCACCACATACACAACCCATTCACGATGGGATCTTGGT  293

seq1  GAGATTCCATAAACCTGCACATAGTCTCCTCTAACAGAGACTCCCCGCTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCCATAAACCTGCACATAGTCTCCTCTAACAGAGACTCCCCGCTT  343

seq1  TGGGGATAAATATCAATAAACGTATTGATACGTTTTTCTATTCTAAACAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATAAATATCAATAAACGTATTGATACGTTTTTCTATTCTAAACAT  393

seq1  ACAAATCTCACATCCTTTGTAGTACTACACTGGGCTTGATTTCTGAAATC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCTCACATCCTTTGTAGTACTACACTGGGCTTGATTTCTGAAATC  443

seq1  TGTTTAACTAGACATTTCATTTCAAATCTACGGATCTTGATTCAAACCAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAACTAGACATTTCATTTCAAATCTACGGATCTTGATTCAAACCAA  493

seq1  AGGTCTTACCTGTCCAAAACAGAATTACAAAATGCACCCTGGTTTTCTGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTACCTGTCCAAAACAGAATTACAAAATGCACCCTGGTTTTCTGT  543

seq1  TAATTTATGTAGCTATTACACAGCTTGCTGTAAAATAGAATAATGCCTCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATGTAGCTATTACACAGCTTGCTGTAAAATAGAATAATGCCTCA  593

seq1  ATTCATCTTATGGCAATGGCAGCTTCCTCCTTTAATAACTCAGTGGGTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTTATGGCAATGGCAGCTTCCTCCTTTAATAACTCAGTGGGTCT  643

seq1  TTAAATACTTAGATAAGTATCGCATTCTACAATAGCCATCAGGCAAAAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATACTTAGATAAGTATCGCATTCTACAATAGCCATCAGGCAAAAGA  693

seq1  TGTCTCTACCCATATGACTTAGTTTAATTCATTAAGAAAAACATTAGGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTACCCATATGACTTAGTTTAATTCATTAAGAAAAACATTAGGAA  743

seq1  GTGGTCATGGGCTGCTGCATCCCAATAACACTGCCAGATCTTAGAATATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCATGGGCTGCTGCATCCCAATAACACTGCCAGATCTTAGAATATT  793

seq1  AATTGTCTTAACTAAGGTTGAAAAGAACAAAGGAAGAGACTAGTAAGAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTTAACTAAGGTTGAAAAGAACAAAGGAAGAGACTAGTAAGAGA  843

seq1  AAGACTAATAATAGGGAAATTATGTAAAACAACAGAAAATGATAACACCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAATAATAGGGAAATTATGTAAAACAACAGAAAATGATAACACCA  893

seq1  AAGTTGTAAATTCATATTACTTTTCTTTTGACATGAACTACTTCAAGGTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTAAATTCATATTACTTTTCTTTTGACATGAACTACTTCAAGGTA  943

seq1  CACTGGGCCAGTTAAAACTTGTAATGTTTATTTTTTTCACCACTTTCCTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCCAGTTAAAACTTGTAATGTTTATTTTTTTCACCACTTTCCTC  993

seq1  CATGCTGATTTATAAGGCATTACACTCATTTTAGTAATAAACGTGTTATT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGATTTATAAGGCATTACACTCATTTTAGTAATAAACGTGTTATT  1043

seq1  CAATGTTTCCTGAACGTTATGTGTTTTCCTCTTGCAAGCATGGGGCTGCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTCCTGAACGTTATGTGTTTTCCTCTTGCAAGCATGGGGCTGCT  1093

seq1  CTGTGCCTGATTCCTTAATTCTCTACATCAGTGGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCTGATTCCTTAATTCTCTACATCAGTGGAATTC  1132


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