BAC Information

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BAC

Clone NameB6Ng01-203I06
Chromosome8 (Build37)
Map Location 122,811,041 - 123,013,003
singlet/doubletdoublet
Overlap geneGse1
Upstream geneCdh13, Hsbp1, Mlycd, Osgin1, Efcbp2, Gm587, Mbtps1, Hsdl1, Lrrc50, Taf1c, EG628061, 4930403J07Rik, Kcng4, Wfdc1, Atp2c2, 4632415K11Rik, Cotl1, BC025816, Usp10, Crispld2, Zdhhc7, 6430548M08Rik, 1700120B06Rik
Downstream gene4833427B12Rik, LOC668301, 1190005I06Rik, Cox4nb, Cox4i1, Irf8, LOC100042333, Foxf1a, Mthfsd, Foxc2, Foxl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203I06.bB6Ng01-203I06.g
ACCGA023707GA023708
length474894
definitionB6Ng01-203I06.b B6Ng01-203I06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,012,524 - 123,013,003)(122,811,041 - 122,811,929)
sequence
catagtggccagagagggacgaagaaggaaatgaggggaaaaaaaaaaaa
aaatcaagcccagcaatgaaacaaaaccagcgtccaagccacggcgctca
aaaatgtccaaaacaataaaataaaagcagaagagcgatccccggagcac
cgtgggtagaaaccagtttgtgttttttccttttccttctccgagatgat
caaaggctgcctttccgtccagcgcccgggcaggttcggccacctcggcc
ggagcagatccacagtgaggtaattgaccaaggaagggctggagcctcca
cggcggcccggcgtcttcgccgcgtgtgtattttctgccttttggacttg
agatgcaaattaaaaaaaaaaaaaaaaaaaggagggggagctggcggagg
gaagagggcgggagagcagaagaggagagagaaaaataaaggggggcggt
gagggtgatgaaattggggggtta
gaattcttgaacctcttgcctccacctcccgagtgtggagatttcagatg
tgcatgaccacacctggttgtgtgtgctggacagccactgtgcctgctga
gccatatccccatcccggggcattgttaatattcctccttcaaggtgtga
agttgtagacagaggttctcaacctgtgggtcccaactcctttcactggt
ggcccgagatcataccgcatatccaatatctacattatgtattgatcgtt
tttgttttgagacagggtttctctgtgtagccttagctgccctggaactc
tctgtagaccaaactgactttgaactctgagagatccacctgcctctgcc
tcctgagtgctggggttaaaggcgtgtgcagcaccaacacccaacttatg
actcataccagtagcacaattacagtcatcaaggaacaatgaatgaattt
tatggttggggcggggggtgtcttcatcacatggagaagtgtctagaaag
ggttgcagcattaggaaggctagaattctgctctggaatgttctcttctc
tgccacttagagacttgtcttgggcaggctcgctctggtttatgagtcca
gcctctgttccatttcccccttaccccttgggcaaatcccaagcctgcct
gtggattccagggctctgcagaacccagtttgggaagattgtcagtgata
ggccaagggtcccccacatgacctgacggtttgatgagtgtgggataggg
aggggctcgtgaagctctgtgggccatggggggtcattctgcagagttgt
gtcccagccacagccctccttcttcccaagtgaacagacttaccaggagc
agtggtaagcatgaggcccagagtccctgcacgctgtgcacctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_123012524_123013003
seq2: B6Ng01-203I06.b_43_522 (reverse)

seq1  TAACCCCCCAATTTCATCACCCTCACCGCCCCCCTTTATTTTTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCCCAATTTCATCACCCTCACCGCCCCCCTTTATTTTTCTCTCTC  50

seq1  CTCTTCTGCTCTCCCGCCCTCTTCCCTCCGCCAGCTCCCCCTCCTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGCTCTCCCGCCCTCTTCCCTCCGCCAGCTCCCCCTCCTTTTTT  100

seq1  TTTTTTTTTTTTTAATTTGCATCTCAAGTCCAAAAGGCAGAAAATACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTAATTTGCATCTCAAGTCCAAAAGGCAGAAAATACACA  150

seq1  CGCGGCGAAGACGCCGGGCCGCCGTGGAGGCTCCAGCCCTTCCTTGGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGGCGAAGACGCCGGGCCGCCGTGGAGGCTCCAGCCCTTCCTTGGTCA  200

seq1  ATTACCTCACTGTGGATCTGCTCCGGCCGAGGTGGCCGAACCTGCCCGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTCACTGTGGATCTGCTCCGGCCGAGGTGGCCGAACCTGCCCGGG  250

seq1  CGCTGGACGGAAAGGCAGCCTTTGATCATCTCGGAGAAGGAAAAGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGACGGAAAGGCAGCCTTTGATCATCTCGGAGAAGGAAAAGGAAAA  300

seq1  AACACAAACTGGTTTCTACCCACGGTGCTCCGGGGATCGCTCTTCTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAACTGGTTTCTACCCACGGTGCTCCGGGGATCGCTCTTCTGCTT  350

seq1  TTATTTTATTGTTTTGGACATTTTTGAGCGCCGTGGCTTGGACGCTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTGTTTTGGACATTTTTGAGCGCCGTGGCTTGGACGCTGGTT  400

seq1  TTGTTTCATTGCTGGGCTTGATTTTTTTTTTTTTTTCCCCTCATTTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCATTGCTGGGCTTGATTTTTTTTTTTTTTTCCCCTCATTTCCTT  450

seq1  CTTCGTCCCTCTCTGGCCACTATGGAATTC  480
      ||||||||||||||||||||||||||||||
seq2  CTTCGTCCCTCTCTGGCCACTATGGAATTC  480

seq1: chr8_122811041_122811929
seq2: B6Ng01-203I06.g_62_955

seq1  GAATTCTTGAACCTCTTGCCTCCACCTCCCGAGTGTGGAGATTTCAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAACCTCTTGCCTCCACCTCCCGAGTGTGGAGATTTCAGATG  50

seq1  TGCATGACCACACCTGGTTGTGTGTGCTGGACAGCCACTGTGCCTGCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGACCACACCTGGTTGTGTGTGCTGGACAGCCACTGTGCCTGCTGA  100

seq1  GCCATATCCCCATCCCGGGGCATTGTTAATATTCCTCCTTCAAGGTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATCCCCATCCCGGGGCATTGTTAATATTCCTCCTTCAAGGTGTGA  150

seq1  AGTTGTAGACAGAGGTTCTCAACCTGTGGGTCCCAACTCCTTTCACTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAGACAGAGGTTCTCAACCTGTGGGTCCCAACTCCTTTCACTGGT  200

seq1  GGCCCGAGATCATACCGCATATCCAATATCTACATTATGTATTGATCGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGAGATCATACCGCATATCCAATATCTACATTATGTATTGATCGTT  250

seq1  TTTGTTTTGAGACAGGGTTTCTCTGTGTAGCCTTAGCTGCCCTGGAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGAGACAGGGTTTCTCTGTGTAGCCTTAGCTGCCCTGGAACTC  300

seq1  TCTGTAGACCAAACTGACTTTGAACTCTGAGAGATCCACCTGCCTCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGACCAAACTGACTTTGAACTCTGAGAGATCCACCTGCCTCTGCC  350

seq1  TCCTGAGTGCTGGGGTTAAAGGCGTGTGCAGCACCAACACCCAACTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGTGCTGGGGTTAAAGGCGTGTGCAGCACCAACACCCAACTTATG  400

seq1  ACTCATACCAGTAGCACAATTACAGTCATCAAGGAACAATGAATGAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATACCAGTAGCACAATTACAGTCATCAAGGAACAATGAATGAATTT  450

seq1  TATGGTTGGGGCGGGGGGTGTCTTCATCACATGGAGAAGTGTCTAGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTGGGGCGGGGGGTGTCTTCATCACATGGAGAAGTGTCTAGAAAG  500

seq1  GGTTGCAGCATTAGGAAGGCTAGAATTCTGCTCTGGAATGTTCTCTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAGCATTAGGAAGGCTAGAATTCTGCTCTGGAATGTTCTCTTCTC  550

seq1  TGCCACTTAGAGACTTGTCTTGGGCAGGCTCGCTCTGGTTTATGAGTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTTAGAGACTTGTCTTGGGCAGGCTCGCTCTGGTTTATGAGTCCA  600

seq1  GCCTCTGTTCCATTTCCCCCTTACCCCTTGGGCAAATCCCAAGCCTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTTCCATTTCCCCCTTACCCCTTGGGCAAATCCCAAGCCTGCCT  650

seq1  GTGGATTCCAGGGCTCTGCAGAACCCAGTTTGGGAAGATTGTCAGTGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTCCAGGGCTCTGCAGAACCCAGTTTGGGAAGATTGTCAGTGATA  700

seq1  GGCCAAGGGT-CCCCACATGACCTGACGGTTTTGATGAGTGTGGGATA-G  748
      |||||||||| |||||||||||||||||| |||||||||||||||||| |
seq2  GGCCAAGGGTCCCCCACATGACCTGACGG-TTTGATGAGTGTGGGATAGG  749

seq1  GAGGGGCTCGTGAAGCTCTGT-GGCCAT-GGGGGTCATTCTGCAGAGCTG  796
      ||||||||||||||||||||| |||||| |||||||||||||||||| ||
seq2  GAGGGGCTCGTGAAGCTCTGTGGGCCATGGGGGGTCATTCTGCAGAGTTG  799

seq1  TGTCCCAGCCACAGCCCTCC-TCTTCCCAAGTG-ACAGACATAACAGGAG  844
      |||||||||||||||||||| |||||||||||| |||||| || ||||||
seq2  TGTCCCAGCCACAGCCCTCCTTCTTCCCAAGTGAACAGACTTACCAGGAG  849

seq1  CAGTGGAAGCCATGAGGCCCAGAGTCCCTGCACGCTGTGCACCTC  889
      |||||| |  |||||||||||||||||||||||||||||||||||
seq2  CAGTGGTAAGCATGAGGCCCAGAGTCCCTGCACGCTGTGCACCTC  894