BAC Information

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BAC

Clone NameB6Ng01-203O12
Chromosome8 (Build37)
Map Location 4,663,484 - 4,664,590
singlet/doubletsinglet
Overlap genenone
Upstream gene1810033B17Rik, LOC664858, Trappc5, Fcer2a, Clec4g, Cd209a, LOC664870, Cd209e, Cd209d, Cd209b, Cd209c, LOC664888, EG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g, B130050I23Rik, BC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977, Ppia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133
Downstream geneEG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275, LOC623409, LOC669429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203O12.bB6Ng01-203O12.g
ACCGA023997GA023998
length1,1871,111
definitionB6Ng01-203O12.b B6Ng01-203O12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgggcactgctgggttctgcagactttggatacctgggtttac
aacactggctgcccccttgtaccccctgaccaaagaaaatggagaattca
gatggacatcagaacatcagagagcctttgaaaatattaaagaggccctg
ttgactgtgccagccttggaattgccagatctaaccaaactcttcatcct
ctatgccatgacatatttgtctaagaagctggacacagtagccagcggat
agcccacatgtttaaaggccattgccacagtagccttactttttaaagat
gccaacaaattaactttgggacagcaaataactgtggtagccccccactc
tcttgaaaatattatccaccagcccctagaccaatggatgacaaatgccc
agatgactcactagcagagtctattgttgactgaacgagtcatgtttgct
cctcctgctatcctcaaccatgctaccttcttgcctgaaacgaacgactc
cttgtctgtttactgctgtgtggacatccttgcagaagaaactgggatcc
atagtgatctacgcaaccagtcgtggccagtcattccaaactggtacaca
aaagcagcttcctacgtgtcaccttgagcgcagagtcggcagaaaacccc
aaggtcccccgaagactctccatgcgatcttaggacctctggtgagtgga
acacaacttctgttccaatcaaatctcgagggacctgagagcattaatta
gtgaagcagaaaacccggcctgacgagggtcacaagtcccttctagtcag
caccagcaacgggtcaccttgggtgtggagtcaggggacacccccaaggt
ccttagaggactctccacacaatcttaggacctctggtgagtggaacaca
acatctgccaggaggcagttagaacgccagatatctgggcatcttccctt
gcaagagagagcttgcctgcagagtgctctgaccactgaaactcagagag
atctagtcttccagtctgctgataaggctacatatcacagaggacagctc
tacagagacactaattacactaactccagagatcgatgcatgcaactaga
tcttctagagacagaccactcaccatcatcgaatgcagctcacttaacct
tagtcttggaccccaatacacccgaaaagccttagac
gaattcctattcttggatctgtatactgattctatttcagtcttgcatgt
gtttgctttcgatggggtctcgcataactgaggctggccttggatttatt
atgcagctgaggatggcgtgaacttctgacctcctgattctaacttccaa
agatacagaaccagcataccaaatttttgcaattcaagagtttaaacttg
ttaggtaaacactcaactacagaactatgcattcagagcctcacaggtga
caggaaaatggagatacctaaaatgatggatttgattctttagtcttgga
gttggcagcagtcatcatcatcatgtgataaagtgaagtacaacatcagg
agaaaataagttctaaccagcaacaacagactactggtatccctcaacac
atgtggcaaaacatctaagtagcagcctaggcttggaactggacaggctg
tctattgtagtagctctgtaccaaaacttgacatatacattcagagtcaa
tgtactatgagagacattaactaaaagttttaacagtccttccatatccc
aaggagtgtgtgtgtgcactcgtgcgtgtgtgcacccacatccaaacatt
catgtattcagcagtgtgtaaattggtacaaaatcatatttttaaacaca
gttatattttatacaaaattacagagccactttaatgctttgagtatttg
ttatagtcaatttgtgtttacgtaagttttactattcatgtccttggata
aatagatcattgttgggactctacaaagttgtagactaatgaaatctagc
ctctttgaactgttggggcacacagcatcaaatgggagactggagcagca
aacacggcttttcaagaaatgcccatgtagctctgggccagctctctgct
ttcctctgtctgggcctgagttccggtggcactcagcctcacactaggct
cctgttttatttagggccatccgtccattttcattacttacttggctctg
agagcattttcattgggatgtttgagatgcagactgtggcatgtcctaac
acgaaaagctgcacgcacaagtgggagcaatcggaggagagagctacacc
gtgccttgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_4663484_4664590
seq2: B6Ng01-203O12.g_65_1175

seq1  GAATTCCTATTCTTGGATCTGTATACTGATTCTATTTCAGTCTTGCATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTCTTGGATCTGTATACTGATTCTATTTCAGTCTTGCATGT  50

seq1  GTTTGCTTTCGATGGGGTCTCGCATAACTGAGGCTGGCCTTGGATTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTTCGATGGGGTCTCGCATAACTGAGGCTGGCCTTGGATTTATT  100

seq1  ATGCAGCTGAGGATGGCGTGAACTTCTGACCTCCTGATTCTAACTTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCTGAGGATGGCGTGAACTTCTGACCTCCTGATTCTAACTTCCAA  150

seq1  AGATACAGAACCAGCATACCAAATTTTTGCAATTCAAGAGTTTAAACTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGAACCAGCATACCAAATTTTTGCAATTCAAGAGTTTAAACTTG  200

seq1  TTAGGTAAACACTCAACTACAGAACTATGCATTCAGAGCCTCACAGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTAAACACTCAACTACAGAACTATGCATTCAGAGCCTCACAGGTGA  250

seq1  CAGGAAAATGGAGATACCTAAAATGATGGATTTGATTCTTTAGTCTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAATGGAGATACCTAAAATGATGGATTTGATTCTTTAGTCTTGGA  300

seq1  GTTGGCAGCAGTCATCATCATCATGTGATAAAGTGAAGTACAACATCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAGCAGTCATCATCATCATGTGATAAAGTGAAGTACAACATCAGG  350

seq1  AGAAAATAAGTTCTAACCAGCAACAACAGACTACTGGTATCCCTCAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAAGTTCTAACCAGCAACAACAGACTACTGGTATCCCTCAACAC  400

seq1  ATGTGGCAAAACATCTAAGTAGCAGCCTAGGCTTGGAACTGGACAGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCAAAACATCTAAGTAGCAGCCTAGGCTTGGAACTGGACAGGCTG  450

seq1  TCTATTGTAGTAGCTCTGTACCAAAACTTGACATATACATTCAGAGTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTAGTAGCTCTGTACCAAAACTTGACATATACATTCAGAGTCAA  500

seq1  TGTACTATGAGAGACATTAACTAAAAGTTTTAACAGTCCTTCCATATCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTATGAGAGACATTAACTAAAAGTTTTAACAGTCCTTCCATATCCC  550

seq1  AAGGAGTGTGTGTGTGCACTCGTGCGTGTGTGCACCCACATCCAAACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTGTGTGTGTGCACTCGTGCGTGTGTGCACCCACATCCAAACATT  600

seq1  CATGTATTCAGCAGTGTGTAAATTGGTACAAAATCATATTTTTAAACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTCAGCAGTGTGTAAATTGGTACAAAATCATATTTTTAAACACA  650

seq1  GTTATATTTTATACAAAATTACAGAGCCACTTTAATGCTTTGAGTATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATTTTATACAAAATTACAGAGCCACTTTAATGCTTTGAGTATTTG  700

seq1  TTATAGTCAATTTGTGTTTACGTAAGTTTTACTATTCATGTCCTTGGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTCAATTTGTGTTTACGTAAGTTTTACTATTCATGTCCTTGGATA  750

seq1  AATAGATCATTGTTGGGACTCTACAAAGTTGTAGACTAATGAAATCTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATCATTGTTGGGACTCTACAAAGTTGTAGACTAATGAAATCTAGC  800

seq1  CTCTTTGAACTGTTGGGGCACACAGCATCAAATGGGAGACTGGAGCAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGAACTGTTGGGGCACACAGCATCAAATGGGAGACTGGAGCAGCA  850

seq1  AACACGGCTTTTCAAGAAATGCCCATGTAGCTCT-GGCCAGCTCTCTGCT  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACACGGCTTTTCAAGAAATGCCCATGTAGCTCTGGGCCAGCTCTCTGCT  900

seq1  TTCCTCTGTCT-GGCCTGAGTTCCGGTGGCACTCAGCCTCACACTAGGCT  948
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGTCTGGGCCTGAGTTCCGGTGGCACTCAGCCTCACACTAGGCT  950

seq1  CCTGTTTTATTTAGGGCCATCCGTCCATTTTCATTACTTACTTGGCCTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTGTTTTATTTAGGGCCATCCGTCCATTTTCATTACTTACTTGG-CTCT  999

seq1  GAGAGCATTTTCATTGGGATGTTTGAGATGCCAGAACTGTGGCATGT-CT  1047
      |||||||||||||||||||||||||||||| ||| |||||||||||| ||
seq2  GAGAGCATTTTCATTGGGATGTTTGAGATG-CAG-ACTGTGGCATGTCCT  1047

seq1  AACACGGAAAGCTGCACGCAC-AGTGGAGCCAATCGGAGAGAGAG-GCTA  1095
      |||||| |||||||||||||| |||||   ||||||||| ||||| ||||
seq2  AACACGAAAAGCTGCACGCACAAGTGGGAGCAATCGGAG-GAGAGAGCTA  1096

seq1  CA-CGTGC--TGCAG  1107
      || |||||  |||||
seq2  CACCGTGCCTTGCAG  1111