BAC Information

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BAC

Clone NameB6Ng01-203P14
Chromosome8 (Build37)
Map Location 104,259,284 - 104,369,738
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneCdh11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203P14.bB6Ng01-203P14.g
ACCGA024044GA024045
length4891,162
definitionB6Ng01-203P14.b B6Ng01-203P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,369,244 - 104,369,738)(104,259,284 - 104,260,463)
sequence
catacacctattttaggatctctgctctgcctgaccaggtcctgttttct
acttccatcaaatccaataactcttggtttatttaaaactcactgaactt
ctctttagttttcttccctatttccatatctgttatgaatacacattggt
tcatttgatacagagaaagttattgtgacaacctctttcaattcttaaaa
aggctctacccagttcactgtaaatattttagctaaacaaatactgtgac
aggtgttattatgacagaaatgtggaaaagtatttgtggtcaagtcacag
agaaggcagaattcacagtgacagaagatattttagcattacttagatat
agcttcctgcttctcagatgacaggatagtagctttttggggtagccatt
taagcacaggatagtagtaatgaagagatgcctggtgttcatggctttgt
tttaaaatgtagaacggggtggggggagtgtattgggga

gaattcagttcctgaagcttattcatgtatggaagcacttcatgtagaaa
tatcactagtgaaggggaaaatctgtcctctaacttcaagtaaaaaagtg
aaatattaatacttaggttgactggttatctagtaactctggaggtagtt
ttgttatgtgtactttgaagggactctggaattcaatactgagtgctaaa
atattgcttttgtatttcagtcaagatcatcttccagtattgtgaacaag
aacatatatggctataatactgcgttatgctggtcaataaagtaagaaaa
aaaaaaggaaaccaacaaaccaacaaaacaaagcaaagcagaaaacaaac
aaaccataatgcaaatatttttcagtattgtgttaaaaacaaaatgagta
gaaattatacaaactattttcaaaactctgctctgctctgctcttaagtt
tattcaaacattgtctaaacctgaggttcatgcttcttggaaaagagaac
caaatcacttctgagtgctcatttgtaaatatccctttgcataagcacat
taatgatcaaatattaggttacccttttgtgacattttctgagctttaat
ttttatttaattgaaagtatgttagaactgctgtaacatttagaaacatg
gctcagggaaggacatactctgtcttctaaagtacatatttatccaccag
cctaacattgtaagacaactgtgctgtctgtttaagaaaattttatagat
ttgattttaatggataaacttatactttctattaatcattcattaacata
ggtaataattaaaaaagagattaagtaaatgtagattttcaatttaaaag
atataccacagcatgaaatttactcagtcatatatctctatttcctctta
agtcacgaatataagaattatcatttgaaagtctaaaagtaataattttg
caaacctcaaaaaccttttttctttcataccgacaatgaataatcatgga
aataatgcagactattttgaaagtcctcatatcatactttattctgaagt
atgaatacagtctagcatgtttgtattgaatacatcaaagctattcatgt
cattaagtgttttctggatggaagctggagaagagtcaaatcacgtgata
tctcttaaccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104369244_104369738
seq2: B6Ng01-203P14.b_46_540 (reverse)

seq1  TCCCCAATACACTCCCCCCACCCCGTTCTACATTTTAAAACAAAGCCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAATACACTCCCCCCACCCCGTTCTACATTTTAAAACAAAGCCATG  50

seq1  AACACCAGGCATCTCTTCATTACTACTATCCTGTGCTTAAATGGCTACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCAGGCATCTCTTCATTACTACTATCCTGTGCTTAAATGGCTACCC  100

seq1  CAAAAAGCTACTATCCTGTCATCTGAGAAGCAGGAAGCTATATCTAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGCTACTATCCTGTCATCTGAGAAGCAGGAAGCTATATCTAAGTA  150

seq1  ATGCTAAAATATCTTCTGTCACTGTGAATTCTGCCTTCTCTGTGACTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAAATATCTTCTGTCACTGTGAATTCTGCCTTCTCTGTGACTTGA  200

seq1  CCACAAATACTTTTCCACATTTCTGTCATAATAACACCTGTCACAGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATACTTTTCCACATTTCTGTCATAATAACACCTGTCACAGTATT  250

seq1  TGTTTAGCTAAAATATTTACAGTGAACTGGGTAGAGCCTTTTTAAGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGCTAAAATATTTACAGTGAACTGGGTAGAGCCTTTTTAAGAATT  300

seq1  GAAAGAGGTTGTCACAATAACTTTCTCTGTATCAAATGAACCAATGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGTTGTCACAATAACTTTCTCTGTATCAAATGAACCAATGTGTA  350

seq1  TTCATAACAGATATGGAAATAGGGAAGAAAACTAAAGAGAAGTTCAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAACAGATATGGAAATAGGGAAGAAAACTAAAGAGAAGTTCAGTGA  400

seq1  GTTTTAAATAAACCAAGAGTTATTGGATTTGATGGAAGTAGAAAACAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAATAAACCAAGAGTTATTGGATTTGATGGAAGTAGAAAACAGGA  450

seq1  CCTGGTCAGGCAGAGCAGAGATCCTAAAATAGGTGTATGGAATTC  495
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCAGGCAGAGCAGAGATCCTAAAATAGGTGTATGGAATTC  495


seq1: chr8_104259284_104260463
seq2: B6Ng01-203P14.g_66_1227

seq1  GAATTCAGTTCCTGAAGCTTATTCATGTATGGAAGCACTTCATGTAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCTGAAGCTTATTCATGTATGGAAGCACTTCATGTAGAAA  50

seq1  TATCACTAGTGAAGGGGAAAATCTGTCCTCTAACTTCAAGTAAAAAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTAGTGAAGGGGAAAATCTGTCCTCTAACTTCAAGTAAAAAAGTG  100

seq1  AAATATTAATACTTAGGTTGACTGGTTATCTAGTAACTCTGGAGGTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAATACTTAGGTTGACTGGTTATCTAGTAACTCTGGAGGTAGTT  150

seq1  TTGTTATGTGTACTTTGAAGGGACTCTGGAATTCAATACTGAGTGCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATGTGTACTTTGAAGGGACTCTGGAATTCAATACTGAGTGCTAAA  200

seq1  ATATTGCTTTTGTATTTCAGTCAAGATCATCTTCCAGTATTGTGAACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCTTTTGTATTTCAGTCAAGATCATCTTCCAGTATTGTGAACAAG  250

seq1  AACATATATGGCTATAATACTGCGTTATGCTGGTCAATAAAGTAAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATATGGCTATAATACTGCGTTATGCTGGTCAATAAAGTAAGAAAA  300

seq1  AAAAAAGGAAACCAACAAACCAACAAAACAAAGCAAAGCAGAAAACAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGAAACCAACAAACCAACAAAACAAAGCAAAGCAGAAAACAAAC  350

seq1  AAACCATAATGCAAATATTTTTCAGTATTGTGTTAAAAACAAAATGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATAATGCAAATATTTTTCAGTATTGTGTTAAAAACAAAATGAGTA  400

seq1  GAAATTATACAAACTATTTTCAAAACTCTGCTCTGCTCTGCTCTTAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTATACAAACTATTTTCAAAACTCTGCTCTGCTCTGCTCTTAAGTT  450

seq1  TATTCAAACATTGTCTAAACCTGAGGTTCATGCTTCTTGGAAAAGAGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAACATTGTCTAAACCTGAGGTTCATGCTTCTTGGAAAAGAGAAC  500

seq1  CAAATCACTTCTGAGTGCTCATTTGTAAATATCCCTTTGCATAAGCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACTTCTGAGTGCTCATTTGTAAATATCCCTTTGCATAAGCACAT  550

seq1  TAATGATCAAATATTAGGTTACCCTTTTGTGACATTTTCTGAGCTTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATCAAATATTAGGTTACCCTTTTGTGACATTTTCTGAGCTTTAAT  600

seq1  TTTTATTTAATTGAAAGTATGTTAGAACTGCTGTAACATTTAGAAACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTAATTGAAAGTATGTTAGAACTGCTGTAACATTTAGAAACATG  650

seq1  GCTCAGGGAAGGACATACTCTGTCTTCTAAAGTACATATTTATCCACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGGAAGGACATACTCTGTCTTCTAAAGTACATATTTATCCACCAG  700

seq1  CCTAACATTGTAAGACAACTGTGCTGTCTGTTTAAGAAAATTTTATAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACATTGTAAGACAACTGTGCTGTCTGTTTAAGAAAATTTTATAGAT  750

seq1  TTGATTTTAATGGATAAACTTATACTTTCTATTAATCATTCATTAACATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTAATGGATAAACTTATACTTTCTATTAATCATTCATTAACATA  800

seq1  GGTAATAATTAAAAAAGAGATTAAGTAAATGTAGATTTTCAATTTAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATAATTAAAAAAGAGATTAAGTAAATGTAGATTTTCAATTTAAAAG  850

seq1  ATATACCACAGCATGAAATTTACTCAGTCATATATCTCTATTTCCTCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCACAGCATGAAATTTACTCAGTCATATATCTCTATTTCCTCTTA  900

seq1  AGTCACGAATATAAGAATTATCATTTGAAAGTCTAAAAGTAATAATTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACGAATATAAGAATTATCATTTGAAAGTCTAAAAGTAATAATTTTG  950

seq1  CAAACCTCAAAAACCTTTTTCCTTTCATACCGACCAATGAATAATCATGG  1000
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  CAAACCTCAAAAACCTTTTTTCTTTCATACCGA-CAATGAATAATCATGG  999

seq1  AAATAATGCAGAACTA-TTTGAAAGTCCTCATATCATACCTTTATTCTTG  1049
      ||||||||||| |||| ||||||||||||||||||||| |||||||| ||
seq2  AAATAATGCAG-ACTATTTTGAAAGTCCTCATATCATA-CTTTATTC-TG  1046

seq1  AAGGTATGAATACAGTTCTTAGCCATG-TTGTATTGAAATTACATTCAAA  1098
      || |||||||||||||   ||| |||| ||||||||||  |||||   ||
seq2  AA-GTATGAATACAGT--CTAG-CATGTTTGTATTGAA--TACAT--CAA  1088

seq1  AGCCTTATTTCCATGTCATTAAGGTGTTTCTGGTATGTGAAGCTTGGAGA  1148
      |||  ||||  ||||||||||||   ||||||| ||| ||||| ||||||
seq2  AGC--TATT--CATGTCATTAAGTGTTTTCTGG-ATG-GAAGC-TGGAGA  1131

seq1  AGAGTTTCAGATCACTTTATATCTCTT-ACCAA  1180
      ||||  ||| ||||| | ||||||||| |||||
seq2  AGAG--TCAAATCACGTGATATCTCTTAACCAA  1162


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