BAC Information

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BAC

Clone NameB6Ng01-205D02
Chromosome8 (Build37)
Map Location 54,031,443 - 54,032,585
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040220, LOC623935, 1190028D05Rik, LOC676688
Downstream geneAga, Neil3, LOC100040107
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205D02.bB6Ng01-205D02.g
ACCGA024940GA024941
length1,2101,144
definitionB6Ng01-205D02.b B6Ng01-205D02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatgactgagaagcacctaaagaaatg
ttcaacatccgtagtcatcagggaattgcaactcaaaacaatcctgagtt
ccacctcacaccagacagaatggctcacgtcaaaaactcaggtgacagca
gatgctggctgacgaggatgttgagaaagaggaacactcctccattgctg
gtgggattgcaatctggtacagccactctggaaatcactttggtggttcc
tcggaacattggacatagtactacctgaggacccagcaataccgctcctg
tacatataccagaagatgctccaacatgtaataaggaaacatgctccact
atgttcatagcagccttattggtaatagccaggagctggaaagaacacag
atgttcctcaatagaggaatagatacagaaaatgtggtacatttacacag
tggaatactactaagctattaaaaacaatgaattcatggaattcttagtc
agatggttgcaactagaaaatatcatcctcagtgtggtaacccaattaca
aaacaacacatatggtatacgctcaaagataaatggatattagctcagaa
gtttgaaatacccaagatactatatgtacagaccaaatgaagctcaaaaa
aaaggaagatcaaagtttagatacatcggtctttcttagaagggggaaca
aaatacccataggaggagatacagagacaaagtgtggagcagagactgaa
ggaaaggccatccagagactgccccacctggggattaatcccatatacag
tcaccaaacccagaaacttttgtggatgccaagaagtgcttgcagacagg
cgcctgatatagctgtctcctgagaggctctgcaagtgcctgacaaatac
acaggtggatggtctcagtcaaccattggactgagcataagtccccaatg
gaggagcttgagaaaggacccaaggagctgaaggaccttgcagccacata
ggaggatacatatcaatcaccagtaccacagatttccaggactaaccacc
aatcaatattacacatggagggaccatgttcttcactgcatatgttagga
gaaggtggtcctgttggcattcatgggaggactgccccttggtctgtaca
ggttgatccctagtttaggaaatggctagaacagtatacaggtcagtgtg
tggttatatc

gaattcctgattctctgcagagaatgagtgatctggttacagtaactctt
acaagagtaaattttcatgtgaagatacacagagatgataaaataaatga
ctataggggctgcaggtaattattactctctgctggaggtaaggaaatga
atggtatcattcactatagttgagaaaaaatgcaattcacattttgtttt
tagaaaaagattaggtgaaatatatttgtgcctttaattttgataagttt
atatatatatattagttttaatttcttagctttaaaaatcccaagatctt
tttcaaaatatgataatttttacaaaatgggagtcagagttattattaat
tatgattacacctactgtgaactcatccttaaaaagtccaagttgagtag
aagattaaatttagtgtactagcttgagttaacaaatgaagcttctaatt
tttagattttgtccattaaaaagacaattgttttatcgtttttccttatg
ttaaaaaatattatctgaatatttgtagatagggagattaaagaaataaa
tagcataaatgactttgccactggtattaaacacaagtgaagataaagtg
tctgcagatattacaagctaacagttcttcctaggaagtagtgaagtgtc
ctagtgcttactgcctacagcccctgcagattgacaaatgagctcttgtt
aggatatccatttgtaatttaaaatcatgcataaaactatcctgtaggaa
gtttcatggcttcctgcccttaaatagctttcaatatgcctgtaaatcta
gctgtgtaagagatatattcaggagagtcacaagttcacagcatgcctgg
cctagagtgtaatatgaagtccatgctgtgcaaattagtaaaaacttgtc
ttaagataaaaaataaaagggagggctaatgatctagcttgaaaggtaca
gaggttgcacaacagtgtaaggtaataggttcagtctccctatttctccg
aaaaccagtagttctacttcttttaaaagcttatttggaatccacagagc
caaaatcagaactctagccagatttcaacacagatatgtgcagttctaca
cattgtgctgtttctcaaggtatacaatctttcgatgccttcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_54031443_54032585
seq2: B6Ng01-205D02.g_67_1210 (reverse)

seq1  ATGAAGGCATCTGAAGATTTGTATA-CTTGAGAAACAGCACAATGTGTAG  49
      |||||||||||  |||| ||||||| ||||||||||||||||||||||||
seq2  ATGAAGGCATCGAAAGA-TTGTATACCTTGAGAAACAGCACAATGTGTAG  49

seq1  AACTGCACATATCTGTGTTGGAATCTGGCTGGAGTTCTGATTTTTGGCTC  99
      |||||||||||||||||||| ||||||||| ||||||||| |||||||||
seq2  AACTGCACATATCTGTGTTGAAATCTGGCTAGAGTTCTGA-TTTTGGCTC  98

seq1  TGT-GAATCCAAATAAGCTTTTTAAAAGAGTAGAACTACTGGTTTTCGGA  148
      ||| || ||||||||||||||| |||  ||||||||||||||||||||||
seq2  TGTGGATTCCAAATAAGCTTTTAAAAGAAGTAGAACTACTGGTTTTCGGA  148

seq1  GAAATAGGGAGGACTGAACCTATTACCTTACACTGTTGTGCAACCTCTGT  198
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGGGA-GACTGAACCTATTACCTTACACTGTTGTGCAACCTCTGT  197

seq1  ACC-TTCAAGCTAGATCATTAGCCCT-CCTTTTATTTTTTATCTTAAGAC  246
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACCTTTCAAGCTAGATCATTAGCCCTCCCTTTTATTTTTTATCTTAAGAC  247

seq1  AAGTTTTTACTAATTTGCACAGCATGGACTTCATATTACACTCTAGGCCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTACTAATTTGCACAGCATGGACTTCATATTACACTCTAGGCCA  297

seq1  GGCATGCTGTGAACTTGTGACTCTCCTGAATATATCTCTTACACAGCTAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCTGTGAACTTGTGACTCTCCTGAATATATCTCTTACACAGCTAG  347

seq1  ATTTACAGGCATATTGAAAGCTATTTAAGGGCAGGAAGCCATGAAACTTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAGGCATATTGAAAGCTATTTAAGGGCAGGAAGCCATGAAACTTC  397

seq1  CTACAGGATAGTTTTATGCATGATTTTAAATTACAAATGGATATCCTAAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGATAGTTTTATGCATGATTTTAAATTACAAATGGATATCCTAAC  447

seq1  AAGAGCTCATTTGTCAATCTGCAGGGGCTGTAGGCAGTAAGCACTAGGAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTCATTTGTCAATCTGCAGGGGCTGTAGGCAGTAAGCACTAGGAC  497

seq1  ACTTCACTACTTCCTAGGAAGAACTGTTAGCTTGTAATATCTGCAGACAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTACTTCCTAGGAAGAACTGTTAGCTTGTAATATCTGCAGACAC  547

seq1  TTTATCTTCACTTGTGTTTAATACCAGTGGCAAAGTCATTTATGCTATTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTCACTTGTGTTTAATACCAGTGGCAAAGTCATTTATGCTATTT  597

seq1  ATTTCTTTAATCTCCCTATCTACAAATATTCAGATAATATTTTTTAACAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTAATCTCCCTATCTACAAATATTCAGATAATATTTTTTAACAT  647

seq1  AAGGAAAAACGATAAAACAATTGTCTTTTTAATGGACAAAATCTAAAAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAACGATAAAACAATTGTCTTTTTAATGGACAAAATCTAAAAAT  697

seq1  TAGAAGCTTCATTTGTTAACTCAAGCTAGTACACTAAATTTAATCTTCTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCTTCATTTGTTAACTCAAGCTAGTACACTAAATTTAATCTTCTA  747

seq1  CTCAACTTGGACTTTTTAAGGATGAGTTCACAGTAGGTGTAATCATAATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTTGGACTTTTTAAGGATGAGTTCACAGTAGGTGTAATCATAATT  797

seq1  AATAATAACTCTGACTCCCATTTTGTAAAAATTATCATATTTTGAAAAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAACTCTGACTCCCATTTTGTAAAAATTATCATATTTTGAAAAAG  847

seq1  ATCTTGGGATTTTTAAAGCTAAGAAATTAAAACTAATATATATATATAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGATTTTTAAAGCTAAGAAATTAAAACTAATATATATATATAAA  897

seq1  CTTATCAAAATTAAAGGCACAAATATATTTCACCTAATCTTTTTCTAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCAAAATTAAAGGCACAAATATATTTCACCTAATCTTTTTCTAAAA  947

seq1  ACAAAATGTGAATTGCATTTTTTCTCAACTATAGTGAATGATACCATTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGTGAATTGCATTTTTTCTCAACTATAGTGAATGATACCATTCA  997

seq1  TTTCCTTACCTCCAGCAGAGAGTAATAATTACCTGCAGCCCCTATAGTCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTACCTCCAGCAGAGAGTAATAATTACCTGCAGCCCCTATAGTCA  1047

seq1  TTTATTTTATCATCTCTGTGTATCTTCACATGAAAATTTACTCTTGTAAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATCATCTCTGTGTATCTTCACATGAAAATTTACTCTTGTAAG  1097

seq1  AGTTACTGTAACCAGATCACTCATTCTCTGCAGAGAATCAGGAATTC  1143
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTGTAACCAGATCACTCATTCTCTGCAGAGAATCAGGAATTC  1144


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