BAC Information

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BAC

Clone NameB6Ng01-206F02
Chromosome8 (Build37)
Map Location 11,722,963 - 11,723,831
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040008, LOC384782, LOC100040507, LOC665306, Irs2, Col4a1, Col4a2, Rab20, 0710008K08Rik, Cars2, Ing1, Ankrd10, 1700016D06Rik, EG665271, LOC665363, LOC624710, LOC665373
Downstream geneArhgef7, 1700018L24Rik, LOC100040155, LOC100040175, EG434280, EG434279, Sox1, 1700094C09Rik, Tubgcp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206F02.bB6Ng01-206F02.g
ACCGA025765GA025766
length531872
definitionB6Ng01-206F02.b B6Ng01-206F02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagtcacagaacagaccaaggactctcacctgcatgggaaccacccagtg
cccctccctgccctatctcttctgccattggctgaccaagccacaggggt
tggggggagcattttgttctcagctcttccgaggtgtccagctgtgtctg
ggatgcctgagactctgtttacctaggactaccccttgttcaccacccac
ccagctggggtccagtggcttcccacagccagacacccacctggggccat
gtggacagtgtgcaacagttttccgcgtccacccgcccagagcaccggaa
ctctggcgggatgtgggttttctcccacttcctttattccccccacgcct
ggcacccactgcccaacatgacaccacagagtaaactgaagagaacctag
tgtagagccagtaccattagcaactgacaccacccctatcccccatcccc
ctgccccctccccctgccgcctcctcctgctccccctctccacatagtag
cacctgttaattacttaattagcatgtttta
gaattccagcaccaggggttgagaaccgatacagaagagatatttaaaag
tcagaaaggacttagaaacccagtaggcagagcatggctgtagagtacag
ctccaggttttgtggttatggatccgagcaacggccacgaccacattatg
gttgtagctacatgagtgtatccacagaatacgtaccctagctcacacac
aacacaccatacacacaaacacacaccctataccataggggcacatgcac
atatgccataccacagccttcccacacacaccgtgcatgtaccacacatt
gtacacacttaacctttctctctctctctctctctctgctccccttacac
acattgcctgtaaaaatttggagagagccacattatacgtctggtttcgt
tactagcctcccacttttcgttagaggcttgtattgaaaacgttctctgg
ttgtgtgggtggctatggttgagcatcctgggtgtggggctcatggaaac
tattcttgatacatactgggagtgtccaagtgtctcacagaagtttctct
tttcttctctaggagcaaaggtttatataacataacactctctcgaacag
ggagcatgcactcgtgtgctcatgggccagtttttgcaaagtggtattta
caggttcagttggccaatcatgtcagcggccagcagcctcacgttcttgg
ctattaagaagcacactcttccatagcactgtggcgaaggagagagtcag
agggaatttataactcccttttggaaacagtaagaaaggaagtgttccct
tatagaactcgtgggacacagtgagggctctctccagagggagtgggagc
agaattgggaggggggaggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_11722963_11723831
seq2: B6Ng01-206F02.g_68_939

seq1  GAATTCCAGCACCAGGGGTTGAGAACCGATACAGAAGAGATATTTAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCACCAGGGGTTGAGAACCGATACAGAAGAGATATTTAAAAG  50

seq1  TCAGAAAGGACTTAGAAACCCAGTAGGCAGAGCATGGCTGTAGAGTACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGGACTTAGAAACCCAGTAGGCAGAGCATGGCTGTAGAGTACAG  100

seq1  CTCCAGGTTTTGTGGTTATGGATCCGAGCAACGGCCACGACCACATTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGTTTTGTGGTTATGGATCCGAGCAACGGCCACGACCACATTATG  150

seq1  GTTGTAGCTACATGAGTGTATCCACAGAATACGTACCCTAGCTCACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGCTACATGAGTGTATCCACAGAATACGTACCCTAGCTCACACAC  200

seq1  AACACACCATACACACAAACACACACCCTATACCATAGGGGCACATGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACCATACACACAAACACACACCCTATACCATAGGGGCACATGCAC  250

seq1  ATATGCCATACCACAGCCTTCCCACACACACCGTGCATGTACCACACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCATACCACAGCCTTCCCACACACACCGTGCATGTACCACACATT  300

seq1  GTACACACTTAACCTTTCTCTCTCTCTCTCTCTCTCTGCTCCCCTTACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACACTTAACCTTTCTCTCTCTCTCTCTCTCTCTGCTCCCCTTACAC  350

seq1  ACATTGCCTGTAAAAATTTGGAGAGAGCCACATTATACGTCTGGTTTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCCTGTAAAAATTTGGAGAGAGCCACATTATACGTCTGGTTTCGT  400

seq1  TACTAGCCTCCCACTTTTCGTTAGAGGCTTGTATTGAAAACGTTCTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCCTCCCACTTTTCGTTAGAGGCTTGTATTGAAAACGTTCTCTGG  450

seq1  TTGTGTGGGTGGCTATGGTTGAGCATCCTGGGTGTGGGGCTCATGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGGGTGGCTATGGTTGAGCATCCTGGGTGTGGGGCTCATGGAAAC  500

seq1  TATTCTTGATACATACTGGGAGTGTCCAAGTGTCTCACAGAAGTTTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTGATACATACTGGGAGTGTCCAAGTGTCTCACAGAAGTTTCTCT  550

seq1  TTTCTTCTCTAGGAGCAAAGGTTTATATAACATAACACTCTCTCGAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTCTAGGAGCAAAGGTTTATATAACATAACACTCTCTCGAACAG  600

seq1  GGAGCATGCACTCGTGTGCTCATGGGCCAG-TTTTGCAAAGTGGTATTTA  649
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGAGCATGCACTCGTGTGCTCATGGGCCAGTTTTTGCAAAGTGGTATTTA  650

seq1  CAGGTTCAGTTGGCCAATCATGTCAGCGGCCAGCAGCCTCACGTTCTTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCAGTTGGCCAATCATGTCAGCGGCCAGCAGCCTCACGTTCTTGG  700

seq1  CTATTAAGAAGCACACTCTTCCATAGCACTGTGGCGAAGGAGAGAGTCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAGAAGCACACTCTTCCATAGCACTGTGGCGAAGGAGAGAGTCAG  750

seq1  AGGGAAATTATAACTCCC-TTTGGAAACAGTAAGAAAGGAAGTGTTCCCT  798
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  AGGGAATTTATAACTCCCTTTTGGAAACAGTAAGAAAGGAAGTGTTCCCT  800

seq1  TATAGAACTCGTGGGACACAGTGAGGGCTCTCTCCAGAGGGAGTGGGAGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAACTCGTGGGACACAGTGAGGGCTCTCTCCAGAGGGAGTGGGAGC  850

seq1  AGAA-TGGGAGGGGGAAGGGGT  869
      |||| |||||||||| ||||||
seq2  AGAATTGGGAGGGGGGAGGGGT  872