BAC Information

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BAC

Clone NameB6Ng01-206G04
Chromosome8 (Build37)
Map Location 69,212,934 - 69,214,040
singlet/doubletsinglet
Overlap genenone
Upstream geneMarch1, LOC100040986, 1810029B16Rik, Tktl2, Npy5r
Downstream geneNpy1r, BC053440, LOC665453, Nat1, Nat2, LOC100041265, Nat3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206G04.bB6Ng01-206G04.g
ACCGA025813GA025814
length1,2141,104
definitionB6Ng01-206G04.b B6Ng01-206G04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttaacctgataaacagcttcagcaaagtggctggatataaaat
taattcaaacaaatcagcagctgtcttctactcaaaggataaacggactg
agaaagaatttaggaaacaacactctacacaatagtcacaaataatataa
aatattttggtgtgaatctaactaaggaagcaaaagatctttataataaa
aacttcaagtctctgaaaaaagaaattgaagatctcagaagatgcaaaga
tctcccatgcttatgggttggcaggattaatatagcaaaaatgacaatct
tgccaaaaagctctatacctattcaatgcaatccccatcaaaatttcaac
caattcttcatagagttagaaagagcaatttgcaaattcatttggaataa
caaagacccaggatagcaaaaactattctcaacaataaaagaacttccag
ggaaatcaccatcccagacctcaagctgtactacagatcattaagtgata
aaagaacctctggtggaatcaccatgccggacctaaaactgtactacaca
gcaattgtgatcaaaactgcatggtactggtatagtgacagacaagtaga
ccaatggaacagaattgaagacccagagatgaacccacacacctatggtc
acttgatctttgacaagggagctaaaaccatccagtggaaaaaagacagc
attttcaacaaatggtgctggcacaactggctgttatcatgtagaagaat
gtgaattgatccattactatctccttgtactaaggtcaaatctaagtgga
ttaaggaactccacataaaaccagagacactgaaacttatagaggagaaa
gtagggaaaagcctagaagacatggatacaggggaaaaattcctgaatag
aacagcaatggcttgtgctgtaagattgagaatcgataaatgagacctca
taaaattgcaaagcttctgcaaagcaaaagacaccgtcaataagacaaaa
agaccacaacagattggaaaggatctttacctatcccaatcggataggga
ctaatatccaatatatattaaagaactcagagtggactccagaaaatcaa
tacccattaaaaatgtgctcaagctgaccagattctcactgagaatccga
atggctgaaagcacttgaaaatgtccaattctaatctcaagagaagtgcc
agttcaaaacaact
gaattcttgacccttgctttttagtgagtgtgtgtgcatgtgtgtgcact
cctgtgtgtattgtgtaaggtgtatacatgtgcatgcttacttgcacata
tatgtgtaaacaccagaggtggccaatctccaccttagcgtttgatacag
gatctgtcattgaacgaggagcccgctgttttagcttttccttctgacca
gcaaatcaccagggtcttgtgttcttgtgggtgaagtgccacacacagct
ttaacatggctgctgaagttgcaacctcggttgtcacacttgtgaggcaa
gcactttaccgctgacctttccttttggggcttgtgtgtttagggaggaa
atgaaaacaggcaagttcagaatcatctcagtgccatatgagccattctt
ttcaacatagcgctaagagcaaatgtgtggaaaaggaaaaaacttgtatt
tttgacatgggatagacaagagtatgtagcacagctatatttttgggaag
acatccaccacgggtgtctctaagaagctgtttgaaaactcactgtgcat
ttggaagggtgtgtgtcagactgcaagggacaggagaataaatacccacc
tggcaacatatagtgtgtgaactgcacaatagctgacattaagaaagcct
aagatgggccaggtgtggtggtgcacacctttaatcccagcacttgggag
gcagaggcaagaggatttctgagtttgaggccagcctggtctacaaagtg
agttccaggacagctagggctatgcagagaaaccctgtcttgaaaaaccc
aaaccaaaccaaaccaaaaaaagaaagcctaggaccaatccctttgtttg
ctaagcttttgttattaaaagccagtctcctctcttccctcactgcagga
tcccaggaccctgcacaggtacctttctgtgttcaaatattgggacaaat
atagtgattctgaaatgagcccagtagaatcagatgatattttcttgaag
ccttttggagttcttggattcttggcctgagggtatcggcatacactaac
ggttcctgagtactgactgcttaatagcagaaacagggctatatcctctg
acct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69212934_69214040
seq2: B6Ng01-206G04.g_68_1171 (reverse)

seq1  AGGTCAGAAGATATTTGCCTGTTTCTGCTAATTTAGCAGTCAGTACTCAA  50
      |||||||| |||||   |||||||||||| ||| |||||||||||||| |
seq2  AGGTCAGAGGATATAGCCCTGTTTCTGCT-ATTAAGCAGTCAGTACTC-A  48

seq1  GGAAACTGTAGTGTATGCCG-TTCCCTCAGCCCAAGGAATCCAAGAACTT  99
      |||| |  |||||||||||| | ||||||| |||| ||||||||||||| 
seq2  GGAACCGTTAGTGTATGCCGATACCCTCAGGCCAA-GAATCCAAGAACTC  97

seq1  CAAAAGGGCTTCAAGAAAATATCATCTGATTCTACTGGGCTTCATTTCAG  149
      ||||| |||||||||||||||||||||||||||||||||| |||||||||
seq2  CAAAA-GGCTTCAAGAAAATATCATCTGATTCTACTGGGC-TCATTTCAG  145

seq1  AATCACTATATTTGTCCCAATATTTGAACACAG-AAGGTACCTGTGCAGG  198
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATCACTATATTTGTCCCAATATTTGAACACAGAAAGGTACCTGTGCAGG  195

seq1  GTCCTGGGATCCTGCAGTGAGGGAAGAGAGGAGACTGGCTTTTAATAAAC  248
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTCCTGGGATCCTGCAGTGAGGGAAGAGAGGAGACTGGCTTTTAAT-AAC  244

seq1  AAAAGCTTAGCAAAC-AAGGGATTGGTCCTAGGCTTTCTTTTTTTGGTTT  297
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTAGCAAACAAAGGGATTGGTCCTAGGCTTTCTTTTTTTGGTTT  294

seq1  GGTTTGGTTTGGGTTTTTCAAGACAGGGTTTCTCTGCATAGCCCTAGCTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGTTTGGGTTTTTCAAGACAGGGTTTCTCTGCATAGCCCTAGCTG  344

seq1  TCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCTC  394

seq1  TTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCACACCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCACACCT  444

seq1  GGCCCATCTTAGGCTTTCTTAATGTCAGCTATTGTGCAGTTCACACACTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATCTTAGGCTTTCTTAATGTCAGCTATTGTGCAGTTCACACACTA  494

seq1  TATGTTGCCAGGTGGGTATTTATTCTCCTGTCCCTTGCAGTCTGACACAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGCCAGGTGGGTATTTATTCTCCTGTCCCTTGCAGTCTGACACAC  544

seq1  ACCCTTCCAAATGCACAGTGAGTTTTCAAACAGCTTCTTAGAGACACCCG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCCAAATGCACAGTGAGTTTTCAAACAGCTTCTTAGAGACACCCG  594

seq1  TGGTGGATGTCTTCCCAAAAATATAGCTGTGCTACATACTCTTGTCTATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGATGTCTTCCCAAAAATATAGCTGTGCTACATACTCTTGTCTATC  644

seq1  CCATGTCAAAAATACAAGTTTTTTCCTTTTCCACACATTTGCTCTTAGCG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCAAAAATACAAGTTTTTTCCTTTTCCACACATTTGCTCTTAGCG  694

seq1  CTATGTTGAAAAGAATGGCTCATATGGCACTGAGATGATTCTGAACTTGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTGAAAAGAATGGCTCATATGGCACTGAGATGATTCTGAACTTGC  744

seq1  CTGTTTTCATTTCCTCCCTAAACACACAAGCCCCAAAAGGAAAGGTCAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCATTTCCTCCCTAAACACACAAGCCCCAAAAGGAAAGGTCAGC  794

seq1  GGTAAAGTGCTTGCCTCACAAGTGTGACAACCGAGGTTGCAACTTCAGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGTGCTTGCCTCACAAGTGTGACAACCGAGGTTGCAACTTCAGCA  844

seq1  GCCATGTTAAAGCTGTGTGTGGCACTTCACCCACAAGAACACAAGACCCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTTAAAGCTGTGTGTGGCACTTCACCCACAAGAACACAAGACCCT  894

seq1  GGTGATTTGCTGGTCAGAAGGAAAAGCTAAAACAGCGGGCTCCTCGTTCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTGCTGGTCAGAAGGAAAAGCTAAAACAGCGGGCTCCTCGTTCA  944

seq1  ATGACAGATCCTGTATCAAACGCTAAGGTGGAGATTGGCCACCTCTGGTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGATCCTGTATCAAACGCTAAGGTGGAGATTGGCCACCTCTGGTG  994

seq1  TTTACACATATATGTGCAAGTAAGCATGCACATGTATACACCTTACACAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACATATATGTGCAAGTAAGCATGCACATGTATACACCTTACACAA  1044

seq1  TACACACAGGAGTGCACACACATGCACACACACTCACTAAAAAGCAAGGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACAGGAGTGCACACACATGCACACACACTCACTAAAAAGCAAGGG  1094

seq1  TCAAGAATTC  1107
      ||||||||||
seq2  TCAAGAATTC  1104