BAC Information

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BAC

Clone NameB6Ng01-207A18
Chromosome8 (Build37)
Map Location 62,767,759 - 62,874,384
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneAadat, Mfap3l, LOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1, EG664975
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207A18.bB6Ng01-207A18.g
ACCGA026303GA026304
length1,042293
definitionB6Ng01-207A18.b B6Ng01-207A18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,767,759 - 62,768,792)(62,874,092 - 62,874,384)
sequence
gaattctctacgacgggataaatgtgcattccccccccccaaaaaaaatg
tgctttggcttctactaaaaaattttcaactctagtatttcattccgtgt
gtggcactgtgggatgtatttgtattagtatggtatgaaaacagcaagta
tattataatcaatgaaaaactcagaaaatttaaatttttctcaccttttc
tctttaaagacatcatgctaattcctatctgaccctggtaacagtcccct
cagaaaagggaaatatatgttctgatattttcctaccatactctccaatg
tgtggaaaccctggtcttcgtctgctaaggagatcctggtgttttagtcc
cagtctattctagatgaatgtccgtccttacagaaaaagcaacccattgt
tgcatttatctcgctgcgttttctcttcaagccactaagattctgaatgc
tttttctggacaccttttcagaacagagcatggtattttattcagcttct
agtgaacagcttacccactctgttactgagcagagacttctctgttaaag
taattgtgatctgagttggtactcatgtcttagtagaaaactgcgcattt
ggcagagcgcacatggaattgccttctaccaaaaaaaaaaaaaaaatgta
aaacttacagtaaagacaaaaataaaataactcacaatgataaatagact
ggataagctatttctaggccatacagtaagagaaagtgtgtttattgatt
aagaaagtaaacatcttttcaattttctttgtagtgctagtgatcaaatt
caaagcctttggacaccctagataaagaactatgtcaataaatcaatttc
tccagctaagattgatcatcttgaatatttctaattgcccttttcaaagg
ggcaagggaagtccaagtttttgaaaaaaaatattacatttctttttatg
tccatgttgtgtgtgggttatgagtggcgtggccattgacaaacactttc
ctgggaaaattgaagtctttctggtcatcaagaaaagcttta

tgcatagctgtgtaataagagagggacaaggtgaaaagtacttgaaaact
tttcctgcattatccatagcacagcaatcatgtgtgtgtctgagtgtgag
tggggtgggggagagacagaaatctaaattcattcctctgtctttataag
atataacactttgatacaatgaatttatattgatacatatatacagtgat
acacgttcagcataatatttttttaactttttctgattttttaattaggt
attttcttcatttacatttcaaatgctatcccgaaagtccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62767759_62768792
seq2: B6Ng01-207A18.b_48_1089

seq1  GAATTCTCTACGACGGGATAAATGTGCATTCCCCCCCCCCAAAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACGACGGGATAAATGTGCATTCCCCCCCCCCAAAAAAAATG  50

seq1  TGCTTTGGCTTCTACTAAAAAATTTTCAACTCTAGTATTTCATTCCGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGGCTTCTACTAAAAAATTTTCAACTCTAGTATTTCATTCCGTGT  100

seq1  GTGGCACTGTGGGATGTATTTGTATTAGTATGGTATGAAAACAGCAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTGTGGGATGTATTTGTATTAGTATGGTATGAAAACAGCAAGTA  150

seq1  TATTATAATCAATGAAAAACTCAGAAAATTTAAATTTTTCTCACCTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAATCAATGAAAAACTCAGAAAATTTAAATTTTTCTCACCTTTTC  200

seq1  TCTTTAAAGACATCATGCTAATTCCTATCTGACCCTGGTAACAGTCCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAGACATCATGCTAATTCCTATCTGACCCTGGTAACAGTCCCCT  250

seq1  CAGAAAAGGGAAATATATGTTCTGATATTTTCCTACCATACTCTCCAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGGGAAATATATGTTCTGATATTTTCCTACCATACTCTCCAATG  300

seq1  TGTGGAAACCCTGGTCTTCGTCTGCTAAGGAGATCCTGGTGTTTTAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAACCCTGGTCTTCGTCTGCTAAGGAGATCCTGGTGTTTTAGTCC  350

seq1  CAGTCTATTCTAGATGAATGTCCGTCCTTACAGAAAAAGCAACCCATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTATTCTAGATGAATGTCCGTCCTTACAGAAAAAGCAACCCATTGT  400

seq1  TGCATTTATCTCGCTGCGTTTTCTCTTCAAGCCACTAAGATTCTGAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTATCTCGCTGCGTTTTCTCTTCAAGCCACTAAGATTCTGAATGC  450

seq1  TTTTTCTGGACACCTTTTCAGAACAGAGCATGGTATTTTATTCAGCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGGACACCTTTTCAGAACAGAGCATGGTATTTTATTCAGCTTCT  500

seq1  AGTGAACAGCTTACCCACTCTGTTACTGAGCAGAGACTTCTCTGTTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACAGCTTACCCACTCTGTTACTGAGCAGAGACTTCTCTGTTAAAG  550

seq1  TAATTGTGATCTGAGTTGGTACTCATGTCTTAGTAGAAAACTGCGCATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTGATCTGAGTTGGTACTCATGTCTTAGTAGAAAACTGCGCATTT  600

seq1  GGCAGAGCGCACATGGAATTGCCTTCTACCAAAAAAAAAAAAAAAATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGCGCACATGGAATTGCCTTCTACCAAAAAAAAAAAAAAAATGTA  650

seq1  AAACTTACAGTAAAGACAAAAATAAAATAACTCACAATGATAAATAGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTACAGTAAAGACAAAAATAAAATAACTCACAATGATAAATAGACT  700

seq1  GGATAAGCTATTTCTAGGCCATACAGTAAGAGAAAGTGTGTTTATTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGCTATTTCTAGGCCATACAGTAAGAGAAAGTGTGTTTATTGATT  750

seq1  AAGAAAGTAAACATC-TTTCAATTTTCTTTGTAGTGCTAGTGATCAAAAT  799
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  AAGAAAGTAAACATCTTTTCAATTTTCTTTGTAGTGCTAGTGATC-AAAT  799

seq1  TCAAAGCC-TTGGACACCCTAGAT-AAGAACTATGTCAATAAATCAA-TT  846
      |||||||| ||||||||||||||| |||||||||||||||||||||| ||
seq2  TCAAAGCCTTTGGACACCCTAGATAAAGAACTATGTCAATAAATCAATTT  849

seq1  CTCCAGCTAAGATTGATCATCTTGAATATTTCTAATTGCCCTTTTCCAAG  896
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCCAGCTAAGATTGATCATCTTGAATATTTCTAATTGCCCTTTTCAAAG  899

seq1  GGGCAA-GGAAGTCCAAG-TTTTGAAAAAAAATATTACATTTC-TTTTAT  943
      |||||| ||||||||||| |||||||||||||||||||||||| ||||||
seq2  GGGCAAGGGAAGTCCAAGTTTTTGAAAAAAAATATTACATTTCTTTTTAT  949

seq1  GTCCATGTGTGT-TGTGGGGTATGAGT-GCGT-GCCA-TGGCAAACACTT  989
      |||||||| ||| |||||| ||||||| |||| |||| || |||||||||
seq2  GTCCATGT-TGTGTGTGGGTTATGAGTGGCGTGGCCATTGACAAACACTT  998

seq1  TCCTGGGAAAATTGAGGTCTTTCTGGTCATCCAAGAAAAGCTTTA  1034
      ||||||||||||||| |||||||||||||| ||||||||||||||
seq2  TCCTGGGAAAATTGAAGTCTTTCTGGTCAT-CAAGAAAAGCTTTA  1042


seq1: chr8_62874092_62874384
seq2: B6Ng01-207A18.g_71_363 (reverse)

seq1  GGGGGACTTTCGGGATAGCATTTGAAATGTAAATGAAGAAAATACCTAAT  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACTTTCGGGATAGCATTTGAAATGTAAATGAAGAAAATACCTAAT  50

seq1  TAAAAAATCAGAAAAAGTTAAAAAAATATTATGCTGAACGTGTATCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATCAGAAAAAGTTAAAAAAATATTATGCTGAACGTGTATCACTG  100

seq1  TATATATGTATCAATATAAATTCATTGTATCAAAGTGTTATATCTTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTATCAATATAAATTCATTGTATCAAAGTGTTATATCTTATAA  150

seq1  AGACAGAGGAATGAATTTAGATTTCTGTCTCTCCCCCACCCCACTCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGGAATGAATTTAGATTTCTGTCTCTCCCCCACCCCACTCACAC  200

seq1  TCAGACACACACATGATTGCTGTGCTATGGATAATGCAGGAAAAGTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACACACACATGATTGCTGTGCTATGGATAATGCAGGAAAAGTTTTC  250

seq1  AAGTACTTTTCACCTTGTCCCTCTCTTATTACACAGCTATGCA  293
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTTTCACCTTGTCCCTCTCTTATTACACAGCTATGCA  293


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