BAC Information

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BAC

Clone NameB6Ng01-207I24
Chromosome8 (Build37)
Map Location 63,943,946 - 64,121,541
singlet/doubletdoublet
Overlap geneCbr4, Palld
Upstream geneAadat, Mfap3l, LOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1, EG664975
Downstream geneLOC100040872, BC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207I24.bB6Ng01-207I24.g
ACCGA026675GA026676
length1,113198
definitionB6Ng01-207I24.b B6Ng01-207I24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,943,946 - 63,945,056)(64,121,344 - 64,121,541)
sequence
gaattctcttagaattctggttgggtcagaaccaaatttgttactataat
aaaattgaatataaaatggagaataaaagagattaagttatttttctctc
agggctcagaactgctctatctatcaaacagtgaccttttatgcaatgtt
tctaccgaattcactgtgtctttacttcctggatctcagatggcaagtgg
gactgttttgtgatttggacatagtttctgcttgtcaccaaaagctcatt
tgttagaagcttgatccccaatgtgtggacataaatgatggaggaaactg
agtgtgtggcattgggcttaatcccagggcttcatacatactaggcaagt
agaatagcactgagaacctccttatctcttgacctgttagagtctgattt
tacagagaagccattgggagcactacctttacaggaaactgtgtactgtt
tgtagtatacagattaggtttggagagaagatagtacaatagacctgccc
tgctgtctgattccgtatccctccctcttacacagggcactgccctatgg
tgccatctgctaccactttctcaccagagctgaccagaagctccagtatc
acattcctgggactcctcggcctcgagtgttttgttatagtaacagaaaa
cacactgatagaatctctcactaggatatttcttattatctaggagcctt
gcacattttgctacagaaacagaaaatagactagcacaatctctcactct
catctttaccctgatataacaggaattgagggagtagaataaaactttac
ttttatggatatgattgggagattgttgacataattttcacttaagttat
attactctaaccttggcagcattgctctgttagctgctagggatgctggg
aactatagtatgtagtctagaaagccactccattaactcggagctttcta
ttaccaagaacaagggttacagggttgggtaaaataactaggagagctta
gtacaatgtctctagtttgagccagagcagatgatcaggtcagggtagtg
ttcttcagtcagaaaacactttgttcacctggagacattcgccaacgcaa
gctgatgtggcta
atcatcaacagttcactggcagtgatggaaatcctgtagtgtgtattctt
ttaagtgtagattcgggatctggatatgcagctagtgaggtaagcagttc
ggcccttttcctatgattgtgagccaagtaaatggctgagttactaatgg
gctgatttttttttttaactgtggtatgtgggggtaggaaggaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_63943946_63945056
seq2: B6Ng01-207I24.b_45_1157

seq1  GAATTCTCTTAGAATTCTGGTTGGGTCAGAACCAAATTTGTTACTATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAGAATTCTGGTTGGGTCAGAACCAAATTTGTTACTATAAT  50

seq1  AAAATTGAATATAAAATGGAGAATAAAAGAGATTAAGTTATTTTTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGAATATAAAATGGAGAATAAAAGAGATTAAGTTATTTTTCTCTC  100

seq1  AGGGCTCAGAACTGCTCTATCTATCAAACAGTGACCTTTTATGCAATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCAGAACTGCTCTATCTATCAAACAGTGACCTTTTATGCAATGTT  150

seq1  TCTACCGAATTCACTGTGTCTTTACTTCCTGGATCTCAGATGGCAAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCGAATTCACTGTGTCTTTACTTCCTGGATCTCAGATGGCAAGTGG  200

seq1  GACTGTTTTGTGATTTGGACATAGTTTCTGCTTGTCACCAAAAGCTCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTTTGTGATTTGGACATAGTTTCTGCTTGTCACCAAAAGCTCATT  250

seq1  TGTTAGAAGCTTGATCCCCAATGTGTGGACATAAATGATGGAGGAAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAAGCTTGATCCCCAATGTGTGGACATAAATGATGGAGGAAACTG  300

seq1  AGTGTGTGGCATTGGGCTTAATCCCAGGGCTTCATACATACTAGGCAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTGGCATTGGGCTTAATCCCAGGGCTTCATACATACTAGGCAAGT  350

seq1  AGAATAGCACTGAGAACCTCCTTATCTCTTGACCTGTTAGAGTCTGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCACTGAGAACCTCCTTATCTCTTGACCTGTTAGAGTCTGATTT  400

seq1  TACAGAGAAGCCATTGGGAGCACTACCTTTACAGGAAACTGTGTACTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGAAGCCATTGGGAGCACTACCTTTACAGGAAACTGTGTACTGTT  450

seq1  TGTAGTATACAGATTAGGTTTGGAGAGAAGATAGTACAATAGACCTGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTATACAGATTAGGTTTGGAGAGAAGATAGTACAATAGACCTGCCC  500

seq1  TGCTGTCTGATTCCGTATCCCTCCCTCTTACACAGGGCACTGCCCTATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTGATTCCGTATCCCTCCCTCTTACACAGGGCACTGCCCTATGG  550

seq1  TGCCATCTGCTACCACTTTCTCACCAGAGCTGACCAGAAGCTCCAGTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTGCTACCACTTTCTCACCAGAGCTGACCAGAAGCTCCAGTATC  600

seq1  ACATTCCTGGGACTCCTCGGCCTCGAGTGTTTTGTTATAGTAACAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCTGGGACTCCTCGGCCTCGAGTGTTTTGTTATAGTAACAGAAAA  650

seq1  CACACTGATAGAATCTCTCACTAGGATATTTCTTATTATCTAGGAGCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGATAGAATCTCTCACTAGGATATTTCTTATTATCTAGGAGCCTT  700

seq1  GCACATTTTGCTACAGAAACAGAAAATAGACTAGCACAATCTCTCACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTTGCTACAGAAACAGAAAATAGACTAGCACAATCTCTCACTCT  750

seq1  CATCTTTACCCTGATATAACAGGAATTGAGGGAGTAGAATAAAACTTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTACCCTGATATAACAGGAATTGAGGGAGTAGAATAAAACTTTAC  800

seq1  TTTTATGGATATGATTGGGAGATTGTTGACATAATTTTCACTTAAGTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGGATATGATTGGGAGATTGTTGACATAATTTTCACTTAAGTTAT  850

seq1  ATTACTCTAACCTTGGCAGCATTGCTCTGTTAGCTGCTAGGGATGCTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTCTAACCTTGGCAGCATTGCTCTGTTAGCTGCTAGGGATGCTGGG  900

seq1  AACTATAGTATGTAGTCTAGAAAGCCACTCCATTAAC-CGGAGC-TTCTA  948
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  AACTATAGTATGTAGTCTAGAAAGCCACTCCATTAACTCGGAGCTTTCTA  950

seq1  TTACC-AGAAC-AGGGTTACAGGTTTGG--TAAATAACTAGGAGAGCTTA  994
      ||||| ||||| ||||||||||| ||||   |||||||||||||||||||
seq2  TTACCAAGAACAAGGGTTACAGGGTTGGGTAAAATAACTAGGAGAGCTTA  1000

seq1  GTACAATGTCTTCTAGTTTGAGCCAGAGCAGATGGAACAGGTCAGGGTAG  1044
      |||||||||| |||||||||||||||||||||| || |||||||||||||
seq2  GTACAATGTC-TCTAGTTTGAGCCAGAGCAGAT-GATCAGGTCAGGGTAG  1048

seq1  TGGTTCTCAGTCAGAAACAACTTTGTTCA-CTGGAGGACATTTGGCAACG  1093
      || |  |||||||||||  |||||||||| ||||| |||||| | |||||
seq2  TGTTCTTCAGTCAGAAAACACTTTGTTCACCTGGA-GACATTCGCCAACG  1097

seq1  CCAAGCTGATGTTGGCTA  1111
       |||||||||| ||||||
seq2  -CAAGCTGATG-TGGCTA  1113

seq1: chr8_64121344_64121541
seq2: B6Ng01-207I24.g_70_267 (reverse)

seq1  TTTCCTCCTTCCTACCCCCACATACCACAGTTAAAAAAAAAAATCAGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCTTCCTACCCCCACATACCACAGTTAAAAAAAAAAATCAGCCC  50

seq1  ATTAGTAACTCAGCCATTTACTTGGCTCACAATCATAGGAAAAGGGCCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAACTCAGCCATTTACTTGGCTCACAATCATAGGAAAAGGGCCGA  100

seq1  ACTGCTTACCTCACTAGCTGCATATCCAGATCCCGAATCTACACTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTACCTCACTAGCTGCATATCCAGATCCCGAATCTACACTTAAAA  150

seq1  GAATACACACTACAGGATTTCCATCACTGCCAGTGAACTGTTGATGAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACACACTACAGGATTTCCATCACTGCCAGTGAACTGTTGATGAT  198