BAC Information

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BAC

Clone NameB6Ng01-207L14
Chromosome8 (Build37)
Map Location 49,566,329 - 49,724,759
singlet/doubletdoublet
Overlap geneOdz3
Upstream geneD030016E14Rik, Rwdd4a, LOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd
Downstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207L14.bB6Ng01-207L14.g
ACCGA026795GA026796
length1,0241,053
definitionB6Ng01-207L14.b B6Ng01-207L14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,723,753 - 49,724,759)(49,566,329 - 49,567,356)
sequence
gaattcagcggcagtgagtgctgaatcaggtttatggttataattatcac
tgaaatagaaaaaataaatgtgagcgtcatagaacctcggcttatttgcc
attttgagtgtagtcaagtgtttgaagagcggctgactgttttttcttgt
gtgctatttaaagaataatcttctcaaggcgaggcatagtaattctgttt
attaatattggagacatgcagtattatatgtgaaaatcttatatgttatt
tagtgaagagtttgaatgactgagttttactatactgtgatttccttaaa
tgcgttggttgacttgagatggtttttctgtaatgagcagtctgtacata
aaataaatgtaataagcatttgaatgcatattgaaatagatgcaaatgca
tatacactcgagaaaggagcaattaagagtgtctgatgactattaccttg
actttaaatattattattttgagtcacacggcaactgcaaattgaattaa
gtctagatgtgacttattgattctatttcttatttagcgactacatcttc
atccaatgaataataaatgctgactgttgtacccagtgttggggaagcaa
aagtgagtgagatgtagttcctgacctccaggagctcccagcctagttta
gacaaataggcatgtagacatataattggattttaatacggtgagtgttc
agacaacagaatatgcaaagcagatgtcagcacagaatagatggttgcca
gcaggagaggacaaggacaggacaggagagaccatctcataagaatggga
gagctggtatcagcacataagcttagaagtccaaggcagacaaaggcagc
gtaggaaaacgtgttattggctagtgttatttcagctttgacaccagcta
gaagtcattttggaagaagggaagcccaattgagaaaagtgcccccaccc
gaattgggcctctgggcaagtctgtgtaaacattttgtttgcactgtaat
gaattaacatgggaaggaacccag

gaattctttgcgccaacaacaaccgacctgctacagttagcagaagatat
aattctgtctaatccacaagcacttagaggggcatggtaacaaggcctgc
tggttctcaaataataatccagagtcccttgtacgaagtgcatccgtcct
cagcatcagaaacaacttccacgctatcagtaaatcccaaccccttaaat
cgctccataaagctgtggctggactcggcctacctttcaccgagctcaaa
gagcctgcgaaaataaataaccgcattcaatatttcatttttaaagaaaa
cggcaatttaaaagggggaaaacatttagtctaatgagactgatctgacg
gtaagaaggtggtaaatggctcagcctcttggtgtattattaactctttc
tggccacttggggaacattctgagtactgtactaaaagaggtaatttact
aaatggtaccctaatggccagaaagagttaatgtggtaatcaaaaatgag
caatttactgctcatcaactaaccgagctcagtaaattcttttttttttt
tttttttattaaaatgcctctgatactgttcaagtggaattttaattgaa
aaactgaaagccatttagctgagaatgcggtagggtggatattacaaccg
attaatccaagaaaagtaacggcgtgtctaaccaaagaaatacaagctac
aactcttgagtctgcgcctaccagcatcgaggccaacgccactagcgttg
ttgaatgccttttatacgccagccactccaccaatacggcagccactcca
ccagaagatgtgcgtgtggacttcaatgttttcaaaggatgcgttcgtgg
atcagaagtgggagctaatagaaaggtgggtgggtgtaagggacgtctgg
ggactagaagccaaagctattcagatttctggcgggccatgaccgtttga
acttccaaactgcactgcctctcaataccagaacagggcgaatataagct
tacctcgctctccaaattgtgggaggaagttggataggagtttatttaat
caa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49723753_49724759
seq2: B6Ng01-207L14.b_35_1058 (reverse)

seq1  CTGGGT--CCTCCCATGTTAA-TCAT--CAGTGCAA--CAAATG-TTACA  42
      ||||||  | ||||||||||| ||||  ||||||||   ||||| |||||
seq2  CTGGGTTCCTTCCCATGTTAATTCATTACAGTGCAAACAAAATGTTTACA  50

seq1  CAGACTTGCCCAGAGGCC--AATCGGGTGGGGGCAC-TTTCTCAATTGGG  89
      ||||||||||||||||||  | |||||||||||||| |||||||||||||
seq2  CAGACTTGCCCAGAGGCCCAATTCGGGTGGGGGCACTTTTCTCAATTGGG  100

seq1  CTTCCC-TCTTCCAAAATGGC-TCTAGCTGGTGTC-AAGCTGACATAACA  136
      |||||| |||||||||||| | ||||||||||||| ||||||| ||||||
seq2  CTTCCCTTCTTCCAAAATGACTTCTAGCTGGTGTCAAAGCTGAAATAACA  150

seq1  CTAGCCAAT-ACACGTTTTCCTACGCTG-CTTTGTCTGCCTTGGACTTCT  184
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  CTAGCCAATAACACGTTTTCCTACGCTGCCTTTGTCTGCCTTGGACTTCT  200

seq1  AAGCTTATGTGCTGATACCAGCTCTCCCATTCTTTATGAGATGGTCTCTC  234
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGCTTATGTGCTGATACCAGCTCTCCCATTC-TTATGAGATGGTCTCTC  249

seq1  CTGTCCTGTCC-TGTCCTCTCCTGCTGGCAACCATCTATTCTGTGCTGAC  283
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGTCCTTGTCCTCTCCTGCTGGCAACCATCTATTCTGTGCTGAC  299

seq1  ATCTGCTTTGCATATTCTGTTGTCTGAACACTCACCGTATTAAAATCCAA  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTTTGCATATTCTGTTGTCTGAACACTCACCGTATTAAAATCCAA  349

seq1  TTATATGTCTACATGCCTATTTGTCT-AACTAGGCTGGGAGCTCCTGGAG  382
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTATATGTCTACATGCCTATTTGTCTAAACTAGGCTGGGAGCTCCTGGAG  399

seq1  GTCAGGAACTACATCTCACTCACTTTTGCTTCCCCAACACTGGGTACAAC  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAACTACATCTCACTCACTTTTGCTTCCCCAACACTGGGTACAAC  449

seq1  AGTCAGCATTTATTATTCATTGGATGAAGATGTAGTCGCTAAATAAGAAA  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCATTTATTATTCATTGGATGAAGATGTAGTCGCTAAATAAGAAA  499

seq1  TAGAATCAATAAGTCACATCTAGACTTAATTCAATTTGCAGTTGCCGTGT  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCAATAAGTCACATCTAGACTTAATTCAATTTGCAGTTGCCGTGT  549

seq1  GACTCAAAATAATAATATTTAAAGTCAAGGTAATAGTCATCAGACACTCT  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAAATAATAATATTTAAAGTCAAGGTAATAGTCATCAGACACTCT  599

seq1  TAATTGCTCCTTTCTCGAGTGTATATGCATTTGCATCTATTTCAATATGC  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCTCCTTTCTCGAGTGTATATGCATTTGCATCTATTTCAATATGC  649

seq1  ATTCAAATGCTTATTACATTTATTTTATGTACAGACTGCTCATTACAGAA  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATGCTTATTACATTTATTTTATGTACAGACTGCTCATTACAGAA  699

seq1  AAACCATCTCAAGTCAACCAACGCATTTAAGGAAATCACAGTATAGTAAA  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCTCAAGTCAACCAACGCATTTAAGGAAATCACAGTATAGTAAA  749

seq1  ACTCAGTCATTCAAACTCTTCACTAAATAACATATAAGATTTTCACATAT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTCATTCAAACTCTTCACTAAATAACATATAAGATTTTCACATAT  799

seq1  AATACTGCATGTCTCCAATATTAATAAACAGAATTACTATGCCTCGCCTT  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGCATGTCTCCAATATTAATAAACAGAATTACTATGCCTCGCCTT  849

seq1  GAGAAGATTATTCTTTAAATAGCACACAAGAAAAAACAGTCAGCCGCTCT  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGATTATTCTTTAAATAGCACACAAGAAAAAACAGTCAGCCGCTCT  899

seq1  TCAAACACTTGACTACACTCAAAATGGCAAATAAGCCGAGGTTCTATGAC  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACTTGACTACACTCAAAATGGCAAATAAGCCGAGGTTCTATGAC  949

seq1  GCTCACATTTATTTTTTCTATTTCAGTGATAATTATAACCATAAACCTGA  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACATTTATTTTTTCTATTTCAGTGATAATTATAACCATAAACCTGA  999

seq1  TTCAGCACTCACTGCCGCTGAATTC  1007
      |||||||||||||||||||||||||
seq2  TTCAGCACTCACTGCCGCTGAATTC  1024


seq1: chr8_49566329_49567356
seq2: B6Ng01-207L14.g_71_1123

seq1  GAATTCTTTGCGCCAACAACAACCGACCTGCTACAGTTAGCAGAAGATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCGCCAACAACAACCGACCTGCTACAGTTAGCAGAAGATAT  50

seq1  AATTCTGTCTAATCCACAAGCACTTAGAGGGGCATGGTAACAAGGCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTCTAATCCACAAGCACTTAGAGGGGCATGGTAACAAGGCCTGC  100

seq1  TGGTTCTCAAATAATAATCCAGAGTCCCTTGTACGAAGTGCATCCGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTCAAATAATAATCCAGAGTCCCTTGTACGAAGTGCATCCGTCCT  150

seq1  CAGCATCAGAAACAACTTCCACGCTATCAGTAAATCCCAACCCCTTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCAGAAACAACTTCCACGCTATCAGTAAATCCCAACCCCTTAAAT  200

seq1  CGCTCCATAAAGCTGTGGCTGGACTCGGCCTACCTTTCACCGAGCTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCATAAAGCTGTGGCTGGACTCGGCCTACCTTTCACCGAGCTCAAA  250

seq1  GAGCCTGCGAAAATAAATAACCGCATTCAATATTTCATTTTTAAAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGCGAAAATAAATAACCGCATTCAATATTTCATTTTTAAAGAAAA  300

seq1  CGGCAATTTAAAAGGGGGAAAACATTTAGTCTAATGAGACTGATCTGACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAATTTAAAAGGGGGAAAACATTTAGTCTAATGAGACTGATCTGACG  350

seq1  GTAAGAAGGTGGTAAATGGCTCAGCCTCTTGGTGTATTATTAACTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAGGTGGTAAATGGCTCAGCCTCTTGGTGTATTATTAACTCTTTC  400

seq1  TGGCCACTTGGGGAACATTCTGAGTACTGTACTAAAAGAGGTAATTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACTTGGGGAACATTCTGAGTACTGTACTAAAAGAGGTAATTTACT  450

seq1  AAATGGTACCCTAATGGCCAGAAAGAGTTAATGTGGTAATCAAAAATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTACCCTAATGGCCAGAAAGAGTTAATGTGGTAATCAAAAATGAG  500

seq1  CAATTTACTGCTCATCAACTAACCGAGCTCAGTAAATTCTTTTTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTACTGCTCATCAACTAACCGAGCTCAGTAAATTCTTTTTTTTTTT  550

seq1  TTTTTTTATTAAAATGCCTCTGATACTGTTCAAGTGGAATTTTAATTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTAAAATGCCTCTGATACTGTTCAAGTGGAATTTTAATTGAA  600

seq1  AAACTGAAAGCCATTTAGCTGAGAATGCGGTAGGGTGGATATTACAACCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAAGCCATTTAGCTGAGAATGCGGTAGGGTGGATATTACAACCG  650

seq1  ATTAATCCAAGAAAAGTAACGGCGTGTCTAACCAAAGAAATACAAGCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCCAAGAAAAGTAACGGCGTGTCTAACCAAAGAAATACAAGCTAC  700

seq1  AACTCTTGAGTCTGCGCCTACCAGCATCGAGGCCAACGCCACTAGCGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGAGTCTGCGCCTACCAGCATCGAGGCCAACGCCACTAGCGTTG  750

seq1  TTGAATGCCTTTTATACGCCAGCCACTCCACCAATACGGCAGCCACTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGCCTTTTATACGCCAGCCACTCCACCAATACGGCAGCCACTCCA  800

seq1  CCAGAAGATGTGCGTGTGGACTTCAATG-TTTCAAAGGATGCGTTCGT-G  848
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  CCAGAAGATGTGCGTGTGGACTTCAATGTTTTCAAAGGATGCGTTCGTGG  850

seq1  ATCAGAAGT-GGAGCT-ATAGAAAGGTGG--TGGTGT-AGGGACG-CT-G  891
      ||||||||| |||||| ||||||||||||   ||||| ||||||| || |
seq2  ATCAGAAGTGGGAGCTAATAGAAAGGTGGGTGGGTGTAAGGGACGTCTGG  900

seq1  GGACTAGAAGCC-AAGCTA-TCAGA-TTCT-GCGGGCCATGACGGTT--G  935
      |||||||||||| |||||| ||||| |||| |||||||||||| |||   
seq2  GGACTAGAAGCCAAAGCTATTCAGATTTCTGGCGGGCCATGACCGTTTGA  950

seq1  ACTT-CAAACTGCACTGCCTCTCATTA-CAGACAGGGGCGAA-ATTAGCT  982
      |||| ||||||||||||||||||| || ||||   ||||||| || ||||
seq2  ACTTCCAAACTGCACTGCCTCTCAATACCAGAACAGGGCGAATATAAGCT  1000

seq1  TA-CTCGCTCTCCAAA-TGT-GGAGG-AGTTG--AAAGAGTTTA-TTAAT  1025
      || ||||||||||||| ||| ||||| |||||   | ||||||| |||||
seq2  TACCTCGCTCTCCAAATTGTGGGAGGAAGTTGGATAGGAGTTTATTTAAT  1050

seq1  CAA  1028
      |||
seq2  CAA  1053


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