BAC Information

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BAC

Clone NameB6Ng01-208A05
Chromosome8 (Build37)
Map Location 63,177,894 - 63,178,669
singlet/doubletsinglet
Overlap genenone
Upstream geneAadat, Mfap3l
Downstream geneLOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1, EG664975, Cbr4, Palld, LOC100040872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208A05.bB6Ng01-208A05.g
ACCGA027007GA027008
length1,247779
definitionB6Ng01-208A05.b B6Ng01-208A05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttatctctgagccccattttttagtggggttatttgatt
ttctggagtccaccttcttgagttctttatatatacttgatattagtccc
ttatctgatttagggttggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgccttacagaagctttgcaatttta
tgaggtcccatttgtcaattcttgatcttacagtacaagccattgctgtt
ctattcagaaaattttcccctgtgcatatcttcaaggcttttccccactt
tctcctctataagttcactgtctctggttttatgtgaacttccttgatcc
acttagatttgaacttagtacaaggagataggaatggatcaattcacatt
ctactacatgataactgccagttgtgccagcaccatttgttgaaaatgct
gtcttttttccactggatggttttagctcccttgtcaaagatcaagtgac
cataggtgtgttggttcatttctgggtcttcaattctattccattggtct
acttgtctgtcactataccagtaccatgcagtttttaccacaattgttct
gtagtacagctttaggtcaggcatggtgattctcccagaggttcttttat
cattgagaagaatttttgctatcctaggttttttgttattccagatgaat
ttgaaaattgccctttcaaactcagtgaagaattgagttggaattttgat
ggggattgcattgaatcagcagattgttttgggcaagatacccatttttt
atatgttgatcctaccaatccatgagcatgggaggtctttccatcttttg
agatcttctttgatttctttcttcagagacttgaagttttatcataaagg
tctttcacttccttagttagagtcacgccaagaattttatattatttgtg
actattgtcaagggtgttgtttccctattttctttctcaacctgtttatc
ctttgtgtagagaaaggccattgacttgtttgagttaaattttatatcca
gctacttcactgaagctggtttatcaggtttaggagttcttcttagtgga
atttttaagggtcaccttataataatcaatttgatcagcaataaagtgaa
tttttggacgtttcctttccaatcgtatcctggattcttgttggtatcgt
cctggcctaggactctagaacttgttgtggttagcgtgtagcatgac
gaattcagctgtatgtgcaagggtctcactaaagaaaccactgaaaccgt
ttctccatagttaattgggaagtttttttaatgtgtaagagaaaaaaaat
ccagaggcacctggaagagtccagagcaaagagaagagcagactggacat
ggccaggactgtctgtgagagaaagtagtggggatggggacggagcaggc
agataaaaaccttgagagaggatttggttcagcctggggtagcatagtgc
aaggggagtggggtaagggagaagagtcaggaggctacctgtcggggatt
tgaaatatataacgggtacttgtgaatagggactgagagaacatggggga
caacatgggttctgatatgaagccacaggtataggttggtggagagccat
atatctcttctgctagaggcagaggcaatgactctttggtggattggaac
caatttacaagttcctgaggaattcttgcttttatcttactgccagaaat
tcttctaatactccagcttgaatcaagccaagactcatttctgaacacac
gcattgcctgagacctaccaatagttaaagacttcatgaatctgagatgg
aaagtttggagcaaattggagacactcagcctaatgattatgggagggca
gtgtctcttctagggtatgagcaaagtctgctagatgtacttatggaaag
attcccttttccttaagacaaagtaggacacatcttccaacaagaaaatg
ggcaacgtgaagagatgatgtatacagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_63177894_63178669
seq2: B6Ng01-208A05.g_63_841 (reverse)

seq1  AACTGTATACATCATCTCTTCACGTTGCC--ATTTCTTGTTGGATGATGT  48
      |||||||||||||||||||||||||||||   |||||||||||| |||||
seq2  AACTGTATACATCATCTCTTCACGTTGCCCATTTTCTTGTTGGAAGATGT  50

seq1  GTCCTACTTTGTCTTAAGG-AAAGGGAATCTTTCCATAAGTACATCTAGC  97
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTCCTACTTTGTCTTAAGGAAAAGGGAATCTTTCCATAAGTACATCTAGC  100

seq1  AGACTTTGCTCATACCCTAGAAGAGACACTGCCCTCCCATAATCATTAGG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTGCTCATACCCTAGAAGAGACACTGCCCTCCCATAATCATTAGG  150

seq1  CTGAGTGTCTCCAATTTGCTCCAAACTTTCCATCTCAGATTCATGAAGTC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGTCTCCAATTTGCTCCAAACTTTCCATCTCAGATTCATGAAGTC  200

seq1  TTTAACTATTGGTAGGTCTCAGGCAATGCGTGTGTTCAGAAATGAGTCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTATTGGTAGGTCTCAGGCAATGCGTGTGTTCAGAAATGAGTCTT  250

seq1  GGCTTGATTCAAGCTGGAGTATTAGAAGAATTTCTGGCAGTAAGATAAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGATTCAAGCTGGAGTATTAGAAGAATTTCTGGCAGTAAGATAAAA  300

seq1  GCAAGAATTCCTCAGGAACTTGTAAATTGGTTCCAATCCACCAAAGAGTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATTCCTCAGGAACTTGTAAATTGGTTCCAATCCACCAAAGAGTC  350

seq1  ATTGCCTCTGCCTCTAGCAGAAGAGATATATGGCTCTCCACCAACCTATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTCTGCCTCTAGCAGAAGAGATATATGGCTCTCCACCAACCTATA  400

seq1  CCTGTGGCTTCATATCAGAACCCATGTTGTCCCCCATGTTCTCTCAGTCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGCTTCATATCAGAACCCATGTTGTCCCCCATGTTCTCTCAGTCC  450

seq1  CTATTCACAAGTACCCGTTATATATTTCAAATCCCCGACAGGTAGCCTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCACAAGTACCCGTTATATATTTCAAATCCCCGACAGGTAGCCTCC  500

seq1  TGACTCTTCTCCCTTACCCCACTCCCCTTGCACTATGCTACCCCAGGCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTCTCCCTTACCCCACTCCCCTTGCACTATGCTACCCCAGGCTG  550

seq1  AACCAAATCCTCTCTCAAGGTTTTTATCTGCCTGCTCCGTCCCCATCCCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATCCTCTCTCAAGGTTTTTATCTGCCTGCTCCGTCCCCATCCCC  600

seq1  ACTACTTTCTCTCACAGACAGTCCTGGCCATGTCCAGTCTGCTCTTCTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTCTCTCACAGACAGTCCTGGCCATGTCCAGTCTGCTCTTCTCT  650

seq1  TTGCTCTGGACTCTTCCAGGTGCCTCTGGATTTTTTTTCTCTTACACATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTGGACTCTTCCAGGTGCCTCTGGATTTTTTTTCTCTTACACATT  700

seq1  AAAAAAACTTCCCAATTAACTATGGAGAAACGGTTTCAGTGGTTTCTTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACTTCCCAATTAACTATGGAGAAACGGTTTCAGTGGTTTCTTTA  750

seq1  GTGAGACCCTTGCACATACAGCTGAATTC  776
      |||||||||||||||||||||||||||||
seq2  GTGAGACCCTTGCACATACAGCTGAATTC  779