BAC Information

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BAC

Clone NameB6Ng01-210B07
Chromosome8 (Build37)
Map Location 80,618,091 - 80,736,825
singlet/doubletdoublet
Overlap geneEG622803
Upstream geneNr3c2, Arhgap10, LOC100039235, AI931714, Tmem34, Ednra
Downstream geneTtc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466, Lsm6, EG666340, EG666346, D630040G17Rik, 1700011L22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210B07.bB6Ng01-210B07.g
ACCGA028516GA028517
length1,1301,147
definitionB6Ng01-210B07.b B6Ng01-210B07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,735,692 - 80,736,825)(80,618,091 - 80,619,236)
sequence
gaattctctcccggactctgctctctgctgattttctgcacgagtgtttg
tgagttctatttgctgtcatctcacaggtaaagatctctgagttagaggt
ctagaaaactctctctctcgcttgtttgtatttattctccccgcttgctg
ttcctaactctctggaaagtctatgactgatcttgtgctgaacatgaggt
tccttagagatagatctttgcaaatgaaagaaaactcaaacaaaaataaa
ggggaaacagtttcctccaagtgaatgttgctggcttcagctagtttttt
ttttttttttttttttctcaagggacttggacccttctgaaagtactgag
gacttaaggacatgccgatctttacccacataaaattaatctcactttat
tcttttcacttatagatgtctttactatgagcctatcttccccgaaagtg
tcagctaaatgtgcgtttttgtctttcctttctcttgtcctgtaatagca
tggggacaggaatgtggtatgtattcacacaggatttttaattaaatgaa
tgattgacagggaagacagaaattcctccaattgattctctcttccctgt
ctagaattcaaagtggagtgggagaagatacagatgaccacttaaagctg
ttacttacctacgatatccagagtatcttctgatctgtgctctgaagatg
ggtatttaggataagttaaaactctcttcaaatgcaaattctaatcctcc
agtggatgccaccacatcctaaccacttcccataatagatctcaatacag
tgtgacatcccgctctcaatcctgataggaaagtttccctgaggcctcct
gttttgactccggtgttttattgcatgtgtccccttgcaacactgaagaa
agaatattctaggcaatctgagttcttttggggatgacattgtctgactt
ttccctacaaacattgataaaaatgtacaccttttggtacttagaaagta
tccttttaacatttgccatttcccagagtagtgatgagacctgaaaccat
ttccttgtccctcctgtgttggtgatctactaggagatctatgtgtccat
gacagtcacaaggccttagtgctaaaacat
gaattctattagcaacggttaatccttgacctttctctcatattgctgtt
taggagttttccagagatgaggagatgctgcagaattgactcaggtattg
gctgctctgtcctttaaaaggattccaaacagctttggtcgcaggtgttg
ctggtaaaggttgaaggttggttgattatttacatcactcctttttgcac
cctggatataaccatggagtagccggaagtggtgaaagggaaaaagaaaa
ggttgttgacatcatggcagtaacagcggcctgaagcccggctggggaat
tcgtctgggagtgaagaccagccaagctggataggccaagaaccaatgaa
cctttaaaaagctttaaaaggaaacagatgaaagaaaaatccacaaggac
acacatgggcctgaaagtggacgcagtagaatccgagaaatactaaaaag
agcatacccagtgcagtgggagaagaaattctagctggggctggccatct
gggatgcggtgccctgttcttcttggccggcaatcacaagaacataaaac
acgttacaataaacactttggctagtgaggaaagaggctggctagactca
caagaacacagcactgcaattctgtaatagcagaactaagttcagaggca
cagttcactctgcacatccctccttggtcagtgttcttcacatgacacac
accttttgcttctctttttgtcctcccttaggggaatatgttacattatc
tggggctcttattcttccaactcaagtttcatatgagttgttgtatgggg
gagaatggtcagaaatgattatccagatactgagaaatggcaccagatat
cagcttacacgtggtcacatgattctactttcctctttaagaagagttta
tgctatttcttcaggaggagaaaaggccttctgcagcttggggcttcatc
ttctgtctactccatttgccacaacaacaaaaacagccagcaacaccaaa
ttaggtattcttattttcaacctttagttaaatatcttccatgtgagcac
actactactgatgaaataactttatctgccctgagcagcccaggaaccgg
ttagagacatgctatcctcaggccagcccgatgtactgtcgtagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_80735692_80736825
seq2: B6Ng01-210B07.b_43_1172 (reverse)

seq1  ATGTTTTAGGCAACTAAGG-CTTGTGACTGTCATTGACAACATAGATCTT  49
      |||||||||   ||||||| |||||||||||||| ||| ||||||||| |
seq2  ATGTTTTAG--CACTAAGGCCTTGTGACTGTCATGGAC-ACATAGATC-T  46

seq1  CTTAGTAGATCACCAACACAGGAGGGACAAGGAAATGGGTTTCCAGGGTC  99
      | |||||||||||||||||||||||||||||||||| ||||||   ||||
seq2  CCTAGTAGATCACCAACACAGGAGGGACAAGGAAAT-GGTTTC--AGGTC  93

seq1  TCATCACTACTTCTGGG-AATGGCAAATG-TAAAAGGATACTTTCTAAGT  147
      |||||||||| |||||| ||||||||||| ||||||||||||||||||||
seq2  TCATCACTAC-TCTGGGAAATGGCAAATGTTAAAAGGATACTTTCTAAGT  142

seq1  ACC-AAAGGTGTACATTTTTATCAATGTTTGTAGGGAAAAGTCAGACAAT  196
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAGGTGTACATTTTTATCAATGTTTGTAGGGAAAAGTCAGACAAT  192

seq1  GTCATCCCCAAAAGAACTCAGATTGCCTAGAATATTCTTTCTTCAGTGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCCCAAAAGAACTCAGATTGCCTAGAATATTCTTTCTTCAGTGTT  242

seq1  GCAAGGGGACACATGCAATAAAACACCGGAGTCAAAACAGGAGGCCTCAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGGACACATGCAATAAAACACCGGAGTCAAAACAGGAGGCCTCAG  292

seq1  GGAAACTTTCCTATCAGGATTGAGAGCGGGATGTCACACTGTATTGAGAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTTTCCTATCAGGATTGAGAGCGGGATGTCACACTGTATTGAGAT  342

seq1  CTATTATGGGAAGTGGTTAGGATGTGGTGGCATCCACTGGAGGATTAGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATGGGAAGTGGTTAGGATGTGGTGGCATCCACTGGAGGATTAGAA  392

seq1  TTTGCATTTGAAGAGAGTTTTAACTTATCCTAAATACCCATCTTCAGAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTTGAAGAGAGTTTTAACTTATCCTAAATACCCATCTTCAGAGC  442

seq1  ACAGATCAGAAGATACTCTGGATATCGTAGGTAAGTAACAGCTTTAAGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCAGAAGATACTCTGGATATCGTAGGTAAGTAACAGCTTTAAGTG  492

seq1  GTCATCTGTATCTTCTCCCACTCCACTTTGAATTCTAGACAGGGAAGAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTGTATCTTCTCCCACTCCACTTTGAATTCTAGACAGGGAAGAGA  542

seq1  GAATCAATTGGAGGAATTTCTGTCTTCCCTGTCAATCATTCATTTAATTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAATTGGAGGAATTTCTGTCTTCCCTGTCAATCATTCATTTAATTA  592

seq1  AAAATCCTGTGTGAATACATACCACATTCCTGTCCCCATGCTATTACAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCTGTGTGAATACATACCACATTCCTGTCCCCATGCTATTACAGG  642

seq1  ACAAGAGAAAGGAAAGACAAAAACGCACATTTAGCTGACACTTTCGGGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGAAAGGAAAGACAAAAACGCACATTTAGCTGACACTTTCGGGGA  692

seq1  AGATAGGCTCATAGTAAAGACATCTATAAGTGAAAAGAATAAAGTGAGAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGCTCATAGTAAAGACATCTATAAGTGAAAAGAATAAAGTGAGAT  742

seq1  TAATTTTATGTGGGTAAAGATCGGCATGTCCTTAAGTCCTCAGTACTTTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTATGTGGGTAAAGATCGGCATGTCCTTAAGTCCTCAGTACTTTC  792

seq1  AGAAGGGTCCAAGTCCCTTGAGAAAAAAAAAAAAAAAAAAAAAACTAGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGTCCAAGTCCCTTGAGAAAAAAAAAAAAAAAAAAAAAACTAGCT  842

seq1  GAAGCCAGCAACATTCACTTGGAGGAAACTGTTTCCCCTTTATTTTTGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGCAACATTCACTTGGAGGAAACTGTTTCCCCTTTATTTTTGTT  892

seq1  TGAGTTTTCTTTCATTTGCAAAGATCTATCTCTAAGGAACCTCATGTTCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTCTTTCATTTGCAAAGATCTATCTCTAAGGAACCTCATGTTCA  942

seq1  GCACAAGATCAGTCATAGACTTTCCAGAGAGTTAGGAACAGCAAGCGGGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGATCAGTCATAGACTTTCCAGAGAGTTAGGAACAGCAAGCGGGG  992

seq1  AGAATAAATACAAACAAGCGAGAGAGAGAGTTTTCTAGACCTCTAACTCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAATACAAACAAGCGAGAGAGAGAGTTTTCTAGACCTCTAACTCA  1042

seq1  GAGATCTTTACCTGTGAGATGACAGCAAATAGAACTCACAAACACTCGTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTTTACCTGTGAGATGACAGCAAATAGAACTCACAAACACTCGTG  1092

seq1  CAGAAAATCAGCAGAGAGCAGAGTCCGGGAGAGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATCAGCAGAGAGCAGAGTCCGGGAGAGAATTC  1130

seq1: chr8_80618091_80619236
seq2: B6Ng01-210B07.g_66_1212

seq1  GAATTCTATTAGCAACGGTTAATCCTTGACCTTTCTCTCATATTGCTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTAGCAACGGTTAATCCTTGACCTTTCTCTCATATTGCTGTT  50

seq1  TAGGAGTTTTCCAGAGATGAGGAGATGCTGCAGAATTGACTCAGGTATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTTTTCCAGAGATGAGGAGATGCTGCAGAATTGACTCAGGTATTG  100

seq1  GCTGCTCTGTCCTTTAAAAGGATTCCAAACAGCTTTGGTCGCAGGTGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTGTCCTTTAAAAGGATTCCAAACAGCTTTGGTCGCAGGTGTTG  150

seq1  CTGGTAAAGGTTGAAGGTTGGTTGATTATTTACATCACTCCTTTTTGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAAGGTTGAAGGTTGGTTGATTATTTACATCACTCCTTTTTGCAC  200

seq1  CCTGGATATAACCATGGAGTAGCCGGAAGTGGTGAAAGGGAAAAAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATATAACCATGGAGTAGCCGGAAGTGGTGAAAGGGAAAAAGAAAA  250

seq1  GGTTGTTGACATCATGGCAGTAACAGCGGCCTGAAGCCCGGCTGGGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTGACATCATGGCAGTAACAGCGGCCTGAAGCCCGGCTGGGGAAT  300

seq1  TCGTCTGGGAGTGAAGACCAGCCAAGCTGGATAGGCCAAGAACCAATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTGGGAGTGAAGACCAGCCAAGCTGGATAGGCCAAGAACCAATGAA  350

seq1  CCTTTAAAAAGCTTTAAAAGGAAACAGATGAAAGAAAAATCCACAAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAAAGCTTTAAAAGGAAACAGATGAAAGAAAAATCCACAAGGAC  400

seq1  ACACATGGGCCTGAAAGTGGACGCAGTAGAATCCGAGAAATACTAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGGCCTGAAAGTGGACGCAGTAGAATCCGAGAAATACTAAAAAG  450

seq1  AGCATACCCAGTGCAGTGGGAGAAGAAATTCTAGCTGGGGCTGGCCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACCCAGTGCAGTGGGAGAAGAAATTCTAGCTGGGGCTGGCCATCT  500

seq1  GGGATGCGGTGCCCTGTTCTTCTTGGCCGGCAATCACAAGAACATAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCGGTGCCCTGTTCTTCTTGGCCGGCAATCACAAGAACATAAAAC  550

seq1  ACGTTACAATAAACACTTTGGCTAGTGAGGAAAGAGGCTGGCTAGACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTACAATAAACACTTTGGCTAGTGAGGAAAGAGGCTGGCTAGACTCA  600

seq1  CAAGAACACAGCACTGCAATTCTGTAATAGCAGAACTAAGTTCAGAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACACAGCACTGCAATTCTGTAATAGCAGAACTAAGTTCAGAGGCA  650

seq1  CAGTTCACTCTGCACATCCCTCCTTGGTCAGTGTTCTTCACATGACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCACTCTGCACATCCCTCCTTGGTCAGTGTTCTTCACATGACACAC  700

seq1  ACCTTTTGCTTCTCTTTTTGTCCTCCCTTAGGGGAATATGTTACATTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTGCTTCTCTTTTTGTCCTCCCTTAGGGGAATATGTTACATTATC  750

seq1  TGGGGCTCTTATTCTTCCAACTCAAGTTTCATATGAGTTGTTGTAT-GGG  799
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGGGGCTCTTATTCTTCCAACTCAAGTTTCATATGAGTTGTTGTATGGGG  800

seq1  GAGAATGGTCAGAAATGATTATCCAGATACTGAGAAATGGCACCAGATAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGGTCAGAAATGATTATCCAGATACTGAGAAATGGCACCAGATAT  850

seq1  CAGGCTTACACGTGGTCACATGATTCTACTTTCCTCTTTAAGAAGAGTTT  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GCTTACACGTGGTCACATGATTCTACTTTCCTCTTTAAGAAGAGTTT  899

seq1  ATGCTATTTCTTCAGGAGGAG-AAAGGCCTTCTGCAGCTTGGGGC-TCAT  947
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  ATGCTATTTCTTCAGGAGGAGAAAAGGCCTTCTGCAGCTTGGGGCTTCAT  949

seq1  CTTCTGTCTACTCCATTTGCAACAACAACAAAAACAG-CAGCAACAACAA  996
      |||||||||||||||||||| |||||||||||||||| |||||||| |||
seq2  CTTCTGTCTACTCCATTTGCCACAACAACAAAAACAGCCAGCAACACCAA  999

seq1  AATAGGTATTC-TATTTCCAACCTTTTAAGTAAAATATCTTCAATGTGAA  1045
      | ||||||||| ||||| ||||||||  ||| |||||||||| ||||| |
seq2  ATTAGGTATTCTTATTTTCAACCTTT--AGTTAAATATCTTCCATGTG-A  1046

seq1  GCACACTACTACTGATGAAAT-ACTTTATCTGCCCTGAGCAGCCCAGGGA  1094
      ||||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  GCACACTACTACTGATGAAATAACTTTATCTGCCCTGAGCAGCCCAGGAA  1096

seq1  CCGG-TAGAGACATGCAAATCCTCAGGCAAGCCCGATGTACTGTCGTTAG  1143
      |||| |||||||||||  |||||||||| ||||||||||||||||| |||
seq2  CCGGTTAGAGACATGC-TATCCTCAGGCCAGCCCGATGTACTGTCG-TAG  1144

seq1  AGG  1146
      |||
seq2  AGG  1147