BAC Information

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BAC

Clone NameB6Ng01-210E09
Chromosome8 (Build37)8 (Build37)
Map Location 65,306,822 - 65,306,898100,538,921 - 100,539,834
singlet/doubletsingletsinglet
Overlap genenone
Upstream genePalld, BC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
Downstream geneSpock3, LOC384831
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210E09.bB6Ng01-210E09.g
ACCGA028655GA028656
length413917
definitionB6Ng01-210E09.b B6Ng01-210E09.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(65,306,822 - 65,306,898)(100,538,921 - 100,539,834)
sequence
gaattctttctttagctctgtactccatttttaaaattgggttattggtt
ttcctggagtctaacttcttgagttctttgtatagtttggctatcaaccc
tttatcagatgtagggttggtaaagatcttttcccaatccttaggtttct
gttttgtcctattgacagtgtcctttaacttacacaagcttttcagtttc
atgaggtcccatttgtcaattgttgatcttagagcttgagccattggtgt
tctgttcaggaaattttcccttgtgctgatgttttcaaggctctttccac
tttgtcttctaatagattcatcatatctggtattatgtggaggtccttga
tccacttggatttgagctttgtacaaggagataaaaatggattaatttgc
attcttctacatg

gaattctaatcaataggggtaaaacttccaggtcattcacagcgtgattt
ctcatgttttattactgaggtatgtgacacatttagcaataggggtttta
ctgtcaatttctgaggaataaccaacagtcatggcaatagcttgggctgt
gggagaatttaagggaactcactgggcaaacaacttcaaaacattcgctg
acctctgttagtggagttgtattgctagcatttgagtttactaacatgtt
tgtccttccattgtaggataattctattacaactttttacatgtacatct
attaatgaataggtattaataacatatctgcgtctaaagtttggtattta
aagcaatagggcaatgtaaaatcagaggaagacaccgatcacaccggtgc
tgagacctgatgggacagttgtacatctatatttgccttggtagagagat
gataattcatgatccactcttggaactatgcctggttgactgagtatttc
ttggtgacaaattcattttcccaaagaagcatttttattattctgctgtc
tgagaaagtacaatgcactgtttttgttgttgtttattgttgttgtttgt
tttattcaggagaaaatgccatttagaatagcttatcacacattttatta
ataactagcagaaaggatcttgaatgctctaatcactatgcacttaggct
gtggtaacattaatcatttgaatggattgtttctttcttatgcctatatt
gaaattcacaactgagcctcagaaaaatatatagttgtaatgattatttt
ttaaaacagaagtttaaaagatgtaaatgcttaaaatttacaaatggaag
acataacatttgtaagggaggtgtgataagagctttgggagagagtagta
ggtaaaggggaagaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65306822_65306898
seq2: B6Ng01-210E09.b_380_456 (reverse)

seq1  CATGTAGAAGAATGTAAATTGATCCATTCTTATCTCCTTGTACAAAGCTA  50
      |||||||||||||| ||||| ||||||| |||||||||||||||||||| 
seq2  CATGTAGAAGAATGCAAATTAATCCATTTTTATCTCCTTGTACAAAGCTC  50

seq1  AAGTCCAAGTGGATCAAGGAACTCCAC  77
      || ||||||||||||||||| ||||||
seq2  AAATCCAAGTGGATCAAGGACCTCCAC  77


seq1: chr8_100538921_100539834
seq2: B6Ng01-210E09.g_63_979

seq1  GAATTCTAATCAATAGGGGTAAAACTTCCAGGTCATTCACAGCGTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATCAATAGGGGTAAAACTTCCAGGTCATTCACAGCGTGATTT  50

seq1  CTCATGTTTTATTACTGAGGTATGTGACACATTTAGCAATAGGGGTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTTTATTACTGAGGTATGTGACACATTTAGCAATAGGGGTTTTA  100

seq1  CTGTCAATTTCTGAGGAATAACCAACAGTCATGGCAATAGCTTGGGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAATTTCTGAGGAATAACCAACAGTCATGGCAATAGCTTGGGCTGT  150

seq1  GGGAGAATTTAAGGGAACTCACTGGGCAAACAACTTCAAAACATTCGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAATTTAAGGGAACTCACTGGGCAAACAACTTCAAAACATTCGCTG  200

seq1  ACCTCTGTTAGTGGAGTTGTATTGCTAGCATTTGAGTTTACTAACATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGTTAGTGGAGTTGTATTGCTAGCATTTGAGTTTACTAACATGTT  250

seq1  TGTCCTTCCATTGTAGGATAATTCTATTACAACTTTTTACATGTACATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTCCATTGTAGGATAATTCTATTACAACTTTTTACATGTACATCT  300

seq1  ATTAATGAATAGGTATTAATAACATATCTGCGTCTAAAGTTTGGTATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGAATAGGTATTAATAACATATCTGCGTCTAAAGTTTGGTATTTA  350

seq1  AAGCAATAGGGCAATGTAAAATCAGAGGAAGACACCGATCACACCGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATAGGGCAATGTAAAATCAGAGGAAGACACCGATCACACCGGTGC  400

seq1  TGAGACCTGATGGGACAGTTGTACATCTATATTTGCCTTGGTAGAGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCTGATGGGACAGTTGTACATCTATATTTGCCTTGGTAGAGAGAT  450

seq1  GATAATTCATGATCCACTCTTGGAACTATGCCTGGTTGACTGAGTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTCATGATCCACTCTTGGAACTATGCCTGGTTGACTGAGTATTTC  500

seq1  TTGGTGACAAATTCATTTTCCCAAAGAAGCATTTTTATTATTCTGCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGACAAATTCATTTTCCCAAAGAAGCATTTTTATTATTCTGCTGTC  550

seq1  TGAGAAAGTACAATGCACTGTTTTTGTTGTTGTTTATTGTTGTTGTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGTACAATGCACTGTTTTTGTTGTTGTTTATTGTTGTTGTTTGT  600

seq1  TTTATTCAGGAGAAAATGCCATTTAGAATAGCTTATCACACATTTTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGGAGAAAATGCCATTTAGAATAGCTTATCACACATTTTATTA  650

seq1  ATAACTAGCAGAAAGGATCTTGAATGCTCTAATCACTATGCACTTAGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAGCAGAAAGGATCTTGAATGCTCTAATCACTATGCACTTAGGCT  700

seq1  GTGGTAACATTAATCATTTGAATGGATTGTTTCTTTCTTATGCCTATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAACATTAATCATTTGAATGGATTGTTTCTTTCTTATGCCTATATT  750

seq1  GAAATTCACAACTGAGCCTCAGAAAAATATATAGTTGTAATGATTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCACAACTGAGCCTCAGAAAAATATATAGTTGTAATGATTATTTT  800

seq1  TTAAAACAGAAGTTTAAAAGATGTAAATGCTTAAAATTTACAAATGGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAGAAGTTTAAAAGATGTAAATGCTTAAAATTTACAAATGGAAG  850

seq1  ACATAACATTTGTAA-GGAGGTGTGATAAGAGCTTT-GGAGAGAGTAGTA  898
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  ACATAACATTTGTAAGGGAGGTGTGATAAGAGCTTTGGGAGAGAGTAGTA  900

seq1  GGT-AAGGGGAAGAATT  914
      ||| |||||||||||||
seq2  GGTAAAGGGGAAGAATT  917


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