BAC Information

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BAC

Clone NameB6Ng01-210J18
Chromosome8 (Build37)
Map Location 24,742,591 - 24,743,706
singlet/doubletsinglet
Overlap genenone
Upstream genePolb, Ikbkb, Plat, Ap3m2, Myst3, LOC100042253, Ank1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1
Downstream geneLOC100040931, Zmat4, 1810011O10Rik, Indol1, Indo, Adam18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210J18.bB6Ng01-210J18.g
ACCGA028907GA028908
length1,1421,199
definitionB6Ng01-210J18.b B6Ng01-210J18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtgtgtaccaaggccaactgactgatcaaaattccaatgacc
gtcgtgagtttgaatgaggcagttgcgagatctcattacaatttttcctg
ggctatgtttagccacctaaacggcccctactttccatcttcggtgtcag
ccctaacattctgtgactagcagataaagctaaacctagaatcctgatta
acagaataaaaagttttttcgagatgtattaacaaactctgggctccacc
aatcaaagggccgagaatgctctcagagagctaagatttctctgtgaggc
taagctgtctgcttaatgtttccgtcgatgtgtttgaagtgcttcggttt
atgacgttctttgtgctgttcctataaaaatttcatgaaactgctacttc
attgaaacacagaatttggagtgacctaaatttatgtttccaggccgtgg
tcactcatgtttgtctctagaataaactgtcttctatcccatttgagatg
agggttgtgttgctgcacggacaccaactattggcggtgtaatttattct
gagtcctggtttcttttgctttaaatgaagataaagatttgtgtccagag
aagggagcaggaaacagaaggtttcaccaggaggggaaaaggaggagtga
aaacaaaatcaagacggaaaacgtctagtgattccctttcgctggttaag
tctcgctcatgactaaactatgcgaatgaaaggtatttataattctaaga
agaaagcaagagcaaaatataactgcagtacacccactggctttgcagta
aacaatgtttgcataagcctgtaatataacagccattctatgaccatacg
gaggagagttaaggagccggagacacacacacaggcagaaggagtgagat
ggtttaccctttcaagagcatcaccttcactgagtttgaaagcagcagaa
ggcctcagaacatgtccccttcttgactcatccaggcctctgcttcaacg
ttaggtcctttgcccaatgtgtcttgaaggactggcctccaggtgtgcct
tccccaattctgctttgactaccccgtctaggcgtaagctaagaatgcca
catagctattcacttgcccaataggagatcataacagacatt
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaggccagt
ttgctaattggcctcagggcaatcggctaccaggtgcactcccgccctat
gcggagtccccgccctgcgtagtgcgtcagcccgtagtgcgtcagcaatg
cgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattcccc
gagaggaacaaaggaaaatacaacaggcatttccagtctttgaaggagcc
gagggtgggcgtgtccacgctccggtagaatatgtgcagattaaatatgg
aattaatgctaattttaccttggtgcagttagacaggcttgccggcatgg
cactaactcctgccgactggcaaatgattgcaaaagccgctctccctaat
atgggcaaatatttggaatggagatctctgtggcgagaggctgcacaggc
gcaggaccgagcaaacgctgctgctttaactccagagcagagagattgga
cttttgacttgttaacgggtcagagagcttattctgctgaacctgataag
aggtatcaatggaaggtcttaccacagggaatgtccaatagtcctacaat
gtgccaactttatgtgcaagaagctcttttgccagtgaggaaacagttcc
cctctttaattttgctcctttacatggatgacatcctcctgtgccataaa
gaccttaccatgctacaaaaggcatatccttttctacttaaaactttaag
tcagtggggtttacagatagccacagaaaaggtccaaatttctgatacag
gacaattcttgggctctgtggtgtccccagataagattgtgccccaaaag
gtagaaataagaagagatcacctccataccttaaatgatttcaaaagctg
ttgggagatattaattgctcaggaccttctttaaagattcccttccgctg
agttaaggcccttttgtttagtattttagaggagatcctcatatcttcct
cccctaggacttctttactctagctgctacagcctttacaaaagtgaaag
ccttacgatgccacaattcacgaattggaggattcgagccttcagctttg
ggtgtccttagaacgccacgttgccaacctgtgcagatttgtggcgcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_24742591_24743706
seq2: B6Ng01-210J18.b_70_1186 (reverse)

seq1  AATGTCTGTTATGATCTCCTATGGGGCAAGTGATAGGCTATGTGGCCATC  50
      |||||||||||||||||||||| ||||||||||   ||||||||||  ||
seq2  AATGTCTGTTATGATCTCCTATTGGGCAAGTGAATAGCTATGTGGCATTC  50

seq1  TTAGC-TACCGCTAGACGGGGTTAGGTCAAAGCAGAATTGGGG-AGGCAC  98
      ||||| |||  |||||||||||   |||||||||||||||||| ||||||
seq2  TTAGCTTACGCCTAGACGGGGT--AGTCAAAGCAGAATTGGGGAAGGCAC  98

seq1  AACCTGGAGGCCCAGTCCTTC-AGACACATTGGGCAAAGGACCTAACGTT  147
       ||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  -ACCTGGAGG-CCAGTCCTTCAAGACACATTGGGCAAAGGACCTAACGTT  146

seq1  GAAGCAGAGGCCTGGATGAGTCAAGAGGGGGCCATGTTCTGAGGCCTTCT  197
      |||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  GAAGCAGAGGCCTGGATGAGTCAAGAAGGGGACATGTTCTGAGGCCTTCT  196

seq1  GCTGCTTTCAAACTCAGTG-AGGTGATGCTCTTG-AAGGGTTAACCATCT  245
      ||||||||||||||||||| |||||||||||||| |||||| ||||||||
seq2  GCTGCTTTCAAACTCAGTGAAGGTGATGCTCTTGAAAGGGTAAACCATCT  246

seq1  CACTCCTTCTGCCTGTGTGTGTGTCTCCGGCTCCTTAACTCTCCTCCGTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTTCTGCCTGTGTGTGTGTCTCCGGCTCCTTAACTCTCCTCCGTA  296

seq1  TGGTCATAGAATGGCTGTTATATTACAGGCTTATGCAAACATTGTTTACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATAGAATGGCTGTTATATTACAGGCTTATGCAAACATTGTTTACT  346

seq1  GCAAAGCCAGTGGGTGTACTGCAGTTATATTTTGCTCTTGCTTTCTTCTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCCAGTGGGTGTACTGCAGTTATATTTTGCTCTTGCTTTCTTCTT  396

seq1  AGAATTATAAATACCTTTCATTCGCATAGTTTAGTCATGAGCGAGACTTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATAAATACCTTTCATTCGCATAGTTTAGTCATGAGCGAGACTTA  446

seq1  ACCAGCGAAAGGGAATCACTAGACGTTTTCCGTCTTGATTTTGTTTTCAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCGAAAGGGAATCACTAGACGTTTTCCGTCTTGATTTTGTTTTCAC  496

seq1  TCCTCCTTTTCCCCTCCTGGTGAAACCTTCTGTTTCCTGCTCCCTTCTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTTTCCCCTCCTGGTGAAACCTTCTGTTTCCTGCTCCCTTCTCT  546

seq1  GGACACAAATCTTTATCTTCATTTAAAGCAAAAGAAACCAGGACTCAGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAAATCTTTATCTTCATTTAAAGCAAAAGAAACCAGGACTCAGAA  596

seq1  TAAATTACACCGCCAATAGTTGGTGTCCGTGCAGCAACACAACCCTCATC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACACCGCCAATAGTTGGTGTCCGTGCAGCAACACAACCCTCATC  646

seq1  TCAAATGGGATAGAAGACAGTTTATTCTAGAGACAAACATGAGTGACCAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGGGATAGAAGACAGTTTATTCTAGAGACAAACATGAGTGACCAC  696

seq1  GGCCTGGAAACATAAATTTAGGTCACTCCAAATTCTGTGTTTCAATGAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGAAACATAAATTTAGGTCACTCCAAATTCTGTGTTTCAATGAAG  746

seq1  TAGCAGTTTCATGAAATTTTTATAGGAACAGCACAAAGAACGTCATAAAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTTTCATGAAATTTTTATAGGAACAGCACAAAGAACGTCATAAAC  796

seq1  CGAAGCACTTCAAACACATCGACGGAAACATTAAGCAGACAGCTTAGCCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCACTTCAAACACATCGACGGAAACATTAAGCAGACAGCTTAGCCT  846

seq1  CACAGAGAAATCTTAGCTCTCTGAGAGCATTCTCGGCCCTTTGATTGGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAAATCTTAGCTCTCTGAGAGCATTCTCGGCCCTTTGATTGGTG  896

seq1  GAGCCCAGAGTTTGTTAATACATCTCGAAAAAACTTTTTATTCTGTTAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCAGAGTTTGTTAATACATCTCGAAAAAACTTTTTATTCTGTTAAT  946

seq1  CAGGATTCTAGGTTTAGCTTTATCTGCTAGTCACAGAATGTTAGGGCTGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTCTAGGTTTAGCTTTATCTGCTAGTCACAGAATGTTAGGGCTGA  996

seq1  CACCGAAGATGGAAAGTAGGGGCCGTTTAGGTGGCTAAACATAGCCCAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGAAGATGGAAAGTAGGGGCCGTTTAGGTGGCTAAACATAGCCCAGG  1046

seq1  AAAAATTGTAATGAGATCTCGCAACTGCCTCATTCAAACTCACGACGGTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGTAATGAGATCTCGCAACTGCCTCATTCAAACTCACGACGGTC  1096

seq1  ATTGGAATTTTGATCAGTCAG  1116
      |||||||||||||||||||||
seq2  ATTGGAATTTTGATCAGTCAG  1117