BAC Information

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BAC

Clone NameB6Ng01-211G23
Chromosome8 (Build37)
Map Location 39,646,509 - 39,647,604
singlet/doubletsinglet
Overlap genenone
Upstream geneSgcz
Downstream geneTusc3, LOC100038974, LOC632066, EG621335, LOC434304
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211G23.bB6Ng01-211G23.g
ACCGA029503GA029504
length1,2351,097
definitionB6Ng01-211G23.b B6Ng01-211G23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacataaacatgttaaaagcaatctacagcaaacca
atggccaacatcaaagtaaatggtgagaagctggaggcaatcccactaaa
atcagggactagacaaggctgtccactctcgccctacctattcaacattg
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcaaatgatat
gatagtatatatacgtgaccctaaaaattccaccagagaactcctaagcc
tgataaacagcttcagtgaagtagctggatataaaattaactctcacaag
tcaatggcctttctgtatacaaaggataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaatcatataaaataccttggcg
tgactctaactaaggaagtgaaagatctatatgataagaacttcaagtct
ctaaagaaagaaattaaagaagatctcagaagatggaaagatgtcccatg
ctcatggattggcaggatcaacattgtaaaaatgactatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaagggcaatcggcagattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgccagacctaaaactgtactacagagcaactgtgatcaaaactgca
tggtactggtatagtgacagacaagtagaccaatggaacagaattgaaga
cccagagatgaacccacacacctatggtcacttgatctttgacaagggag
ctaaaaccatccagtggaaaaaagacagcattttcaacaaatggtgctgg
cacaactggcagttatcatgtagaagaatgtgaattgatccatttctatc
tccttgtactaagttaaatctaagtggattaagactccacaataaaccag
agaccctgaaacttatagaggagaagtagggaaagccttcgaagatattg
gctacaggaaaattcctgaataggaacagccaatggcttgtgtcttgtag
aatccaagatcattatgggaacctctaaaatgccaagcttctgccaagcg
aagagcacctcgctcattttagagaccataatagc

gaattctaatttatacttgcattctttattctcagaatggacctgaattg
gctaataattgcaaagtctcgtatgtcaaggtcaatagcaaggctacatt
ttttgtaaagtttcttactagggttatttttgcaataatacatttttaaa
atgaaatagcacattgctcccttttaaataaagtatataaaccagttctc
tctccttttgatgactaaagtcaataatcagggcaacagtagttgagaca
aactggaatgtgatcatcattatactggcacaacacactgggttgagtaa
tgaatttcatctaatgaaaagatgctttgatacccagccttgattgctgt
tcatctgctgctttcccataaaagtaagttaagagtactgccctatgacc
tctagggtgttaagagcatgaccactttctccataattaattagcaaacc
aaaggttgaggcaattttctctggagattcaggaatcacaattctgtgtg
ttttctatcatgtgtctccgatcaaccagtgacttttgcttggttaaaat
aactcctgactttgctatattttgagcctcatttatattgtaggtagtag
ttgtggcaggattttctgtatccagttaatttaagtattaacacaacaag
aaacttgtgataggacagggaaaagggaggcagagctgagtagcagagac
atggagggacagaggaggagaggaggaggaaaatgggggacagacaggat
gattccttgtggttttagatagccacatgtagttataatatcatttaggg
atagaaaaattgggctaactatctaaatctaggcgagcagcttgtatcaa
taacaattgggctatgaaattattatgtgggcatcttgtgaactgagaat
ttactgatatataaatctgactgattaattatggttactgggaattgtga
cagctaaacatgaggtgtgtggtcattgcatggggctggtgtggcagcaa
cctgcaaggaaacttagtgagttcgtggaagatttcttgagatctctggc
caaagaagttggctgagataagactccaatgctgaaaccatgtggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_39646509_39647604
seq2: B6Ng01-211G23.g_68_1164

seq1  GAATTCTAATTTATACTTGCATTCTTTATTCTCAGAATGGACCTGAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTTATACTTGCATTCTTTATTCTCAGAATGGACCTGAATTG  50

seq1  GCTAATAATTGCAAAGTCTCGTATGTCAAGGTCAATAGCAAGGCTACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATAATTGCAAAGTCTCGTATGTCAAGGTCAATAGCAAGGCTACATT  100

seq1  TTTTGTAAAGTTTCTTACTAGGGTTATTTTTGCAATAATACATTTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAAAGTTTCTTACTAGGGTTATTTTTGCAATAATACATTTTTAAA  150

seq1  ATGAAATAGCACATTGCTCCCTTTTAAATAAAGTATATAAACCAGTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATAGCACATTGCTCCCTTTTAAATAAAGTATATAAACCAGTTCTC  200

seq1  TCTCCTTTTGATGACTAAAGTCAATAATCAGGGCAACAGTAGTTGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTTGATGACTAAAGTCAATAATCAGGGCAACAGTAGTTGAGACA  250

seq1  AACTGGAATGTGATCATCATTATACTGGCACAACACACTGGGTTGAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAATGTGATCATCATTATACTGGCACAACACACTGGGTTGAGTAA  300

seq1  TGAATTTCATCTAATGAAAAGATGCTTTGATACCCAGCCTTGATTGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCATCTAATGAAAAGATGCTTTGATACCCAGCCTTGATTGCTGT  350

seq1  TCATCTGCTGCTTTCCCATAAAAGTAAGTTAAGAGTACTGCCCTATGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGCTGCTTTCCCATAAAAGTAAGTTAAGAGTACTGCCCTATGACC  400

seq1  TCTAGGGTGTTAAGAGCATGACCACTTTCTCCATAATTAATTAGCAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGTGTTAAGAGCATGACCACTTTCTCCATAATTAATTAGCAAACC  450

seq1  AAAGGTTGAGGCAATTTTCTCTGGAGATTCAGGAATCACAATTCTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTGAGGCAATTTTCTCTGGAGATTCAGGAATCACAATTCTGTGTG  500

seq1  TTTTCTATCATGTGTCTCCGATCAACCAGTGACTTTTGCTTGGTTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATCATGTGTCTCCGATCAACCAGTGACTTTTGCTTGGTTAAAAT  550

seq1  AACTCCTGACTTTGCTATATTTTGAGCCTCATTTATATTGTAGGTAGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTGACTTTGCTATATTTTGAGCCTCATTTATATTGTAGGTAGTAG  600

seq1  TTGTGGCAGGATTTTCTGTATCCAGTTAATTTAAGTATTAACACAACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCAGGATTTTCTGTATCCAGTTAATTTAAGTATTAACACAACAAG  650

seq1  AAACTTGTGATAGGACAGGGAAAAGGGAGGCAGAGCTGAGTAGCAGAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGTGATAGGACAGGGAAAAGGGAGGCAGAGCTGAGTAGCAGAGAC  700

seq1  ATGGAGGGACAGAGGAGGAGAGGAGGAGGAAAATGGGGGACAGACAGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGGACAGAGGAGGAGAGGAGGAGGAAAATGGGGGACAGACAGGAT  750

seq1  GATTCCTTGTGGTTTTAGATAGCCACATGTAGTTATAATATCATTTAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTTGTGGTTTTAGATAGCCACATGTAGTTATAATATCATTTAGGG  800

seq1  ATAGAAAAATTGGGCTAACTATCT-AATCTAGGCGAGCAGCTTGTATCAA  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATAGAAAAATTGGGCTAACTATCTAAATCTAGGCGAGCAGCTTGTATCAA  850

seq1  TAACAATT-GGCTATGAAATTATTATGTGGGCATCTTGTGAACTGAGAAT  898
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATTGGGCTATGAAATTATTATGTGGGCATCTTGTGAACTGAGAAT  900

seq1  TTACTGATATATAAATCTGACTGATTAATTATGGTTACTGGGAATTGTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGATATATAAATCTGACTGATTAATTATGGTTACTGGGAATTGTGA  950

seq1  CAGCTAAACATGAGGTGTGTGGTCATTGCATGGGGCTGGTGTGGCAGCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAACATGAGGTGTGTGGTCATTGCATGGGGCTGGTGTGGCAGCAA  1000

seq1  CCTGCCAAGGAAACTTAGTGAGTCCGGTGGAGATTTCTTGAGATCTCTGG  1048
      |||| |||||||||||||||||| ||  | |||||||||||||||||| |
seq2  CCTG-CAAGGAAACTTAGTGAGTTCGTGGAAGATTTCTTGAGATCTCT-G  1048

seq1  GCCAAAG-AGTTTGCTGAGATAAGAACTCGATGCTGGAACCATGTGGCT  1096
      ||||||| |||| ||||||||||||   | |||||| ||||||||||||
seq2  GCCAAAGAAGTTGGCTGAGATAAGACTCCAATGCTGAAACCATGTGGCT  1097


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