BAC Information

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BAC

Clone NameB6Ng01-212H21
Chromosome8 (Build37)
Map Location 103,036,148 - 103,186,766
singlet/doubletdoublet
Overlap geneLOC100042086, LOC100042092, LOC384895
Upstream geneLOC667531, LOC100042069, LOC436054, LOC100042078
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212H21.bB6Ng01-212H21.g
ACCGA030272GA030273
length269982
definitionB6Ng01-212H21.b B6Ng01-212H21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,036,148 - 103,036,416)(103,186,211 - 103,186,766)
sequence
aattcatttatccatgaactagagataatagttagcacactgttagtagt
gaggacagaattaactagtgtacataaaacgtaggactggtgtaaagaag
agggtagttataacatatctatgtgaatatcttgtctttgagatttccgg
ttctgtaatggatgacagtacaagatatgaaattgtttctatgtttttgg
agcctgatcttcctgggaaattttgttgtttgttgattagaattttgggg
ggtggattgagttggtttg

gaattcactagtaagtacagatttgttactaaattaggcaagatttatca
gtgtataaaaatgaaataaaaagatttgttatcctttgcttgaatctgaa
tgcatccttatgatttttgaatgaaaaccttggttgccagttgtttctgt
tttggaatgattctgttctaaggactctgacgtcaaggatgggttattct
gttgatgagttatcattagaatccggtgaggcttagaagatgggttctga
tggaagaaattaggcaactgggtgtttgacttgaagaataatttgtccct
gactgcttcttgactctctttgcattccagacactatgaggaaagcagtt
ctacagctcccatgccttgctctgcatcaacacacatctatgatgaagat
ccagggcaatagactgagacttctgaaaccctgcaaacaaacattttctt
cttttaagataatcttctcaggcattcgccatagcaacagtcttctaact
gtggtgttgtaacagtttcctctgagatagaaacatctcatctttcagga
aactttgtaaattcaaggatgacaactcaacaaagcttcagtaagtcctg
gaaactcaccagattcaataggctcctcctagagagaattagcaataaat
ctgagagacctccttcagatgaaaggaagccaagctgcaaagaagactct
tagactacagtaccttctgtgaagaagcaggaattagttgagctgtctaa
aatttgtttaaatcaaatgagtacttgcaaaggacactccagaatctatt
tatttgcattcaggttgaacagtatttttggtcccaagctttgtgttcta
tactcatgttgacctgggctctcatgatgcatctgtcatttatgctactg
tgagtagctcctttacccatactcctgaattagcccaaataaaatacatt
agttcaccgaattggacattgtatatctgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103036148_103036416
seq2: B6Ng01-212H21.b_48_316

seq1  AATTCATTTATCCATGAACTAGAGATAATAGTTAGCACACTGTTAGTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTTATCCATGAACTAGAGATAATAGTTAGCACACTGTTAGTAGT  50

seq1  GAGGACAGAATTAACTAGTGTACATAAAACGTAGGACTGGTGTAAAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAGAATTAACTAGTGTACATAAAACGTAGGACTGGTGTAAAGAAG  100

seq1  AGGGTAGTTATAACATATCTATGTGAATATCTTGTCTTTGAGATTTCCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGTTATAACATATCTATGTGAATATCTTGTCTTTGAGATTTCCGG  150

seq1  TTCTGTAATGGATGACAGTACAAGATATGAAATTGTTTCTATGTTTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAATGGATGACAGTACAAGATATGAAATTGTTTCTATGTTTTTGG  200

seq1  AGCCTGATCTTCCTGGGAAATTTTGTTGTTTGTTGATTAGAATTTTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGATCTTCCTGGGAAATTTTGTTGTTTGTTGATTAGAATTTTGGGG  250

seq1  GGTGGATTGAGTTGGTTTG  269
      |||||||||||||||||||
seq2  GGTGGATTGAGTTGGTTTG  269


seq1: chr8_103186211_103186766
seq2: B6Ng01-212H21.g_67_622 (reverse)

seq1  AAAGTTTCCTGAAAGATGAGATGTTTCTATCTCAGAGGAAACTGTTACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCCTGAAAGATGAGATGTTTCTATCTCAGAGGAAACTGTTACAA  50

seq1  CACCACAGTTAGAAGACTGTTGCTATGGCGAATGCCTGAGAAGATTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGTTAGAAGACTGTTGCTATGGCGAATGCCTGAGAAGATTATCT  100

seq1  TAAAAGAAGAAAATGTTTGTTTGCAGGGTTTCAGAAGTCTCAGTCTATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAGAAAATGTTTGTTTGCAGGGTTTCAGAAGTCTCAGTCTATTG  150

seq1  CCCTGGATCTTCATCATAGATGTGTGTTGATGCAGAGCAAGGCATGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGATCTTCATCATAGATGTGTGTTGATGCAGAGCAAGGCATGGGAG  200

seq1  CTGTAGAACTGCTTTCCTCATAGTGTCTGGAATGCAAAGAGAGTCAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAACTGCTTTCCTCATAGTGTCTGGAATGCAAAGAGAGTCAAGAA  250

seq1  GCAGTCAGGGACAAATTATTCTTCAAGTCAAACACCCAGTTGCCTAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGGGACAAATTATTCTTCAAGTCAAACACCCAGTTGCCTAATTT  300

seq1  CTTCCATCAGAACCCATCTTCTAAGCCTCACCGGATTCTAATGATAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATCAGAACCCATCTTCTAAGCCTCACCGGATTCTAATGATAACTC  350

seq1  ATCAACAGAATAACCCATCCTTGACGTCAGAGTCCTTAGAACAGAATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAGAATAACCCATCCTTGACGTCAGAGTCCTTAGAACAGAATCAT  400

seq1  TCCAAAACAGAAACAACTGGCAACCAAGGTTTTCATTCAAAAATCATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACAGAAACAACTGGCAACCAAGGTTTTCATTCAAAAATCATAAG  450

seq1  GATGCATTCAGATTCAAGCAAAGGATAACAAATCTTTTTATTTCATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATTCAGATTCAAGCAAAGGATAACAAATCTTTTTATTTCATTTTT  500

seq1  ATACACTGATAAATCTTGCCTAATTTAGTAACAAATCTGTACTTACTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTGATAAATCTTGCCTAATTTAGTAACAAATCTGTACTTACTAGT  550

seq1  GAATTC  556
      ||||||
seq2  GAATTC  556


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