BAC Information

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BAC

Clone NameB6Ng01-212I10
Chromosome8 (Build37)
Map Location 74,431,101 - 74,572,320
singlet/doubletdoublet
Overlap geneLOC670453, Zfp617, BC049349, Cyp4f18, LOC666033
Upstream geneMtap1s, LOC100042057, LOC665858, LOC384645, LOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1, Unc13a, Jak3, Insl3, B3gnt3, LOC100042289, Fcho1, EG665991, LOC665996, LOC385024, LOC675190, Zfp709
Downstream geneOlfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3, Large
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212I10.bB6Ng01-212I10.g
ACCGA030298GA030299
length8891,049
definitionB6Ng01-212I10.b B6Ng01-212I10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,571,432 - 74,572,320)(74,431,101 - 74,432,151)
sequence
gaattcaaagacaatctggactatgtgagaccctgactccaaacccaacc
caaaggaacatgaagactccacttcaccccagggagagtggctgtatcca
agaaaatatcaaaggctggtgaggatgtggggacccttatacactgtgga
gtgcaaaccagtacaggaaccagagaagacagtctggggctttttgaaaa
aacaaaacaaaacaaaacaaaacaaaacagaacaaaacaaaacaaatcaa
aacaaatcaaatcaaatcaaaacaaaacaaaacaaatcaaatcaaatcaa
gtcaaatcaaaaataaacaaaacaaaacaaaacaaaacaaaactggaact
agaattactatgtgactcagctgtgcccctcaggatttatccaaaggaat
caagggcaacatggcttggcagccgcgtggcagctctctggaacttcctc
agataatatgaagcaaacccaccgtaggatccagcagccccagtagtgtg
taaatatccaaaggaaacaagtatgtgtaagacagatctgctccattgca
tgatcggccataggaactaaggcaggaaataacccatgtcagggaaggaa
tgatgaaaactgtgattgcatgcatgagatgtatgcttctagtggaatat
tactcaggcacaaaaaggacaccctgttatttgggactgttgttgtttat
attatgaatgctaactatgttcccaaaaaactgcttgcatgagagtatct
gcatgtagcttctgtgaacctgtcccatccttggttagtcctgattggta
aataaaaataccaccagccaatagttgggaaaggactgagagaggcagat
tttaggatttcccaggattgggatgaggaggagggaggg
gaattcctgatctttccaagacttttaacatgaacaggtgttgtattttc
ttgagtgctttttcagcatctaatgagatcatcatgtgttttttttttct
ttgagttttgtttatatagtggattacattgatggattttcacatgttga
accatccctgcatccctgggatgaagcctacttgatcatggtgagttatt
gttttgatgtgttcttggactcagtttgcaagaattttattgagtatttt
tacatcaatattcataagggaaattggtctaaagttctctttcttgttga
gtcattgtgtggttttggtatcaacataactgtggcttcatagaatgaag
taggtagtgttccttctgtttctattttgtggaagagaattggtattagc
tcctctttgaaggtctgacagaattctgcactatttattcattcattcat
tcattcattcactcatttttattttaaactagacagttctggaaatggct
aactctggagtgcttgttttcgttccagttaggtaaggattctttatcgt
gtcactgtaatatccaaaataaattcaagactacctagtaccttccccct
tcaaaaggactttccaaactgtactaccaggccaagtacagagccagata
aagaagctggctggctaaacaaatatagaaacatagttttaacggtcaaa
atgactaagcttacagctgccagaacaagattaacaatgcccctgccctg
ccttacactaaaaaccacaaggacagacaaaatgagagtcaccctataca
aatcaaccaatgtccaaaaaggttattggctacaccaattaaaataagcc
aaactaccctggtgcctagatccggcccttacaaaggtaataaaaagtgt
gttccttttgttctggatctctcctctggcctggtgctgaagagggtgtt
ccccaacatgttggacaagtaaaatcctcatgcgttttgcacgatggcgg
tctctgtgtcctttgtagggtctttgacaacatacaacatcacaggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_74571432_74572320
seq2: B6Ng01-212I10.b_47_935 (reverse)

seq1  CCCTCCCTCCTCCTCATCCCAATCCTGGGAAATCCTAAAATCCTGCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCCTCCCTCCTCCTCATCCCAATCCTGGGAAATCCTAAAAT-CTGCCTCT  49

seq1  CTCAGTCC-TTCCCAACTATTGGCTGGTGGTATTTTTATTTACCAATCAG  99
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCCTTTCCCAACTATTGGCTGGTGGTATTTTTATTTACCAATCAG  99

seq1  GACTAACCAAGGATGGGACAGGTTCACAGAAGCTACATGCAGATACTCTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACCAAGGATGGGACAGGTTCACAGAAGCTACATGCAGATACTCTC  149

seq1  ATGCAAGCAGTTTTTTGGGAACATAGTTAGCATTCATAATATAAACAACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGCAGTTTTTTGGGAACATAGTTAGCATTCATAATATAAACAACA  199

seq1  ACAGTCCCAAATAACAGGGTGTCCTTTTTGTGCCTGAGTAATATTCCACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCCAAATAACAGGGTGTCCTTTTTGTGCCTGAGTAATATTCCACT  249

seq1  AGAAGCATACATCTCATGCATGCAATCACAGTTTTCATCATTCCTTCCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCATACATCTCATGCATGCAATCACAGTTTTCATCATTCCTTCCCT  299

seq1  GACATGGGTTATTTCCTGCCTTAGTTCCTATGGCCGATCATGCAATGGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGGTTATTTCCTGCCTTAGTTCCTATGGCCGATCATGCAATGGAG  349

seq1  CAGATCTGTCTTACACATACTTGTTTCCTTTGGATATTTACACACTACTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTGTCTTACACATACTTGTTTCCTTTGGATATTTACACACTACTG  399

seq1  GGGCTGCTGGATCCTACGGTGGGTTTGCTTCATATTATCTGAGGAAGTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCTGGATCCTACGGTGGGTTTGCTTCATATTATCTGAGGAAGTTC  449

seq1  CAGAGAGCTGCCACGCGGCTGCCAAGCCATGTTGCCCTTGATTCCTTTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCTGCCACGCGGCTGCCAAGCCATGTTGCCCTTGATTCCTTTGG  499

seq1  ATAAATCCTGAGGGGCACAGCTGAGTCACATAGTAATTCTAGTTCCAGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCCTGAGGGGCACAGCTGAGTCACATAGTAATTCTAGTTCCAGTT  549

seq1  TTGTTTTGTTTTGTTTTGTTTTGTTTATTTTTGATTTGACTTGATTTGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTGTTTTGTTTTGTTTATTTTTGATTTGACTTGATTTGAT  599

seq1  TTGATTTGTTTTGTTTTGTTTTGATTTGATTTGATTTGTTTTGATTTGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGTTTTGTTTTGTTTTGATTTGATTTGATTTGTTTTGATTTGTT  649

seq1  TTGTTTTGTTCTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTCAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTCTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTCAAAAA  699

seq1  GCCCCAGACTGTCTTCTCTGGTTCCTGTACTGGTTTGCACTCCACAGTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGACTGTCTTCTCTGGTTCCTGTACTGGTTTGCACTCCACAGTGT  749

seq1  ATAAGGGTCCCCACATCCTCACCAGCCTTTGATATTTTCTTGGATACAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGTCCCCACATCCTCACCAGCCTTTGATATTTTCTTGGATACAGC  799

seq1  CACTCTCCCTGGGGTGAAGTGGAGTCTTCATGTTCCTTTGGGTTGGGTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCCCTGGGGTGAAGTGGAGTCTTCATGTTCCTTTGGGTTGGGTTT  849

seq1  GGAGTCAGGGTCTCACATAGTCCAGATTGTCTTTGAATTC  889
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCAGGGTCTCACATAGTCCAGATTGTCTTTGAATTC  889

seq1: chr8_74431101_74432151
seq2: B6Ng01-212I10.g_64_1112

seq1  GAATTCCTGATCTTTCCAAGACTTTTAACATGAACAGGTGTTGTATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTTTCCAAGACTTTTAACATGAACAGGTGTTGTATTTTC  50

seq1  TTGAGTGCTTTTTCAGCATCTAATGAGATCATCATGTGTTTTTTTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGCTTTTTCAGCATCTAATGAGATCATCATGTGTTTTTTTTTTCT  100

seq1  TTGAGTTTTGTTTATATAGTGGATTACATTGATGGATTTTCACATGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTTTGTTTATATAGTGGATTACATTGATGGATTTTCACATGTTGA  150

seq1  ACCATCCCTGCATCCCTGGGATGAAGCCTACTTGATCATGGTGAGTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCCTGCATCCCTGGGATGAAGCCTACTTGATCATGGTGAGTTATT  200

seq1  GTTTTGATGTGTTCTTGGACTCAGTTTGCAAGAATTTTATTGAGTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATGTGTTCTTGGACTCAGTTTGCAAGAATTTTATTGAGTATTTT  250

seq1  TACATCAATATTCATAAGGGAAATTGGTCTAAAGTTCTCTTTCTTGTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAATATTCATAAGGGAAATTGGTCTAAAGTTCTCTTTCTTGTTGA  300

seq1  GTCATTGTGTGGTTTTGGTATCAACATAACTGTGGCTTCATAGAATGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTGTGGTTTTGGTATCAACATAACTGTGGCTTCATAGAATGAAG  350

seq1  TAGGTAGTGTTCCTTCTGTTTCTATTTTGTGGAAGAGAATTGGTATTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGTGTTCCTTCTGTTTCTATTTTGTGGAAGAGAATTGGTATTAGC  400

seq1  TCCTCTTTGAAGGTCTGACAGAATTCTGCACTATTTATTCATTCATTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTGAAGGTCTGACAGAATTCTGCACTATTTATTCATTCATTCAT  450

seq1  TCATTCATTCACTCATTTTTATTTTAAACTAGACAGTTCTGGAAATGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATTCACTCATTTTTATTTTAAACTAGACAGTTCTGGAAATGGCT  500

seq1  AACTCTGGAGTGCTTGTTTTCGTTCCAGTTAGGTAAGGATTCTTTATCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGAGTGCTTGTTTTCGTTCCAGTTAGGTAAGGATTCTTTATCGT  550

seq1  GTCACTGTAATATCCAAAATAAATTCAAGACTACCTAGTACCTTCCCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGTAATATCCAAAATAAATTCAAGACTACCTAGTACCTTCCCCCT  600

seq1  TCAAAAGGACTTTCCAAACTGTACTACCAGGCCAAGTACAGAGCCAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGACTTTCCAAACTGTACTACCAGGCCAAGTACAGAGCCAGATA  650

seq1  AAGAAGCTGGCTGGCTAAACAAATATAGAAACATAGTTTTAACGGTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTGGCTGGCTAAACAAATATAGAAACATAGTTTTAACGGTCAAA  700

seq1  ATGACTAAGCTTACAGCTGCCAGAACAAGATTAACAATGCCCCTGCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTAAGCTTACAGCTGCCAGAACAAGATTAACAATGCCCCTGCCCTG  750

seq1  CCTTACACTAAAAACCACAAGGACAGACAAAATGAGAGTCACCCTATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACACTAAAAACCACAAGGACAGACAAAATGAGAGTCACCCTATACA  800

seq1  AATCAACCAATGTCCAAAAAGGTTATTGGCTACACCAATTAAAATAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACCAATGTCCAAAAAGGTTATTGGCTACACCAATTAAAATAAGCC  850

seq1  AAACTACCCTGGTGCCTAGATCCGGCCCTTACAAAGGTAATAAAAAGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACCCTGGTGCCTAGATCCGGCCCTTACAAAGGTAATAAAAAGTGT  900

seq1  GTTCC-TTTGTTCTGGATCTCTCCTCTGGCCTGGTGCTG-AGAGGGTGTT  948
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTTCCTTTTGTTCTGGATCTCTCCTCTGGCCTGGTGCTGAAGAGGGTGTT  950

seq1  CCCCAACATGTTGGACAAGTAAAATCCTCATGCGTTTTGCAACGATGGCG  998
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCCAACATGTTGGACAAGTAAAATCCTCATGCGTTTTGC-ACGATGGCG  999

seq1  GTCTCTGTGGTCTTTGTAAGGGTCTTTTGACAACATACAACATCACAAGG  1048
      |||||||||  |||||| |||||| ||||||||||||||||||||| |||
seq2  GTCTCTGTGTCCTTTGT-AGGGTC-TTTGACAACATACAACATCAC-AGG  1046

seq1  GGC  1051
      |||
seq2  GGC  1049