BAC Information

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BAC

Clone NameB6Ng01-212P15
Chromosome8 (Build37)
Map Location 77,102,164 - 77,103,376
singlet/doubletsinglet
Overlap genenone
Upstream geneCrry-ps, LOC666146
Downstream geneIsx, Hmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507, LOC384845, LOC666211, LOC100039229, 1700007B14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212P15.bB6Ng01-212P15.g
ACCGA030636GA030637
length1,2281,073
definitionB6Ng01-212P15.b B6Ng01-212P15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagagctaacaacagtgagatcatccaagtccaaagctccaatt
ctttgaagtacaggacttcagcctaagcatgcaatttaggaacagcttcc
cagaggtgcatatgaataggccttgaaagatgaatagagactctaaagat
gaaagactcacagcatactcaaatccaaaagcacaaaagattgggacacc
agtatgacacgtagatggagcacaggaaggtacaaaaaccagtaatgcca
aagagatgaactgaggaccccagcacatatgtagtagatttgcagctcag
tcttctcatgggtcccccaacaacgagagcagagctgtccctaaagctga
tgtttctctgtggaatctgttctcctaattgggcttccttatctggcctc
agtgggagaggatgtgcctagccctgcagagacttgatgtgccagggtgg
gaggatacccaggggtgctctcaccctctcagatgagaagaggatggggt
gtaagaaaagggactttgtgaagagaccaggaggagaggcaataattggg
atgcaaaacaaataagcaaataaattaatggaggaagaaaacaaaacagt
gatgcctacattaaatcaggctggacagatgccagaattttaacctgtgt
attaaagtctgcctctatttcgtttacattccagtgtagaacttgtaagg
cctattatgtctccagaactgaagaacatcttcatggaggatcccacact
gatgacactctatcattaccagctccttgtgttgaattagtcattcccac
acaattttgtttcttcaccagaaaaatagaaatgctaatacctacatgaa
gctatcagacatatgctttgtaagtcaatctattatctcacaatcctagt
tgaatgggttcactaacctccattttaaagacaagcttataccccaaaaa
cattaactccccaaaggtcatgcaaatattagctagggtatcatatatgg
gatcctggtgctttctgatgccaaaagctagtgatacctggtgacttttg
tgggaacccttgacttgtggcagattgtaaacatcatattcaaagaattt
ctgtagtcatggtacaaagaagacctgtgggtgtttttatggagattcca
gaagggaacaatggaaaccactcagacatctggggtgtttagccacactc
tcatgtgagagaaaggccgttggcagtg
gaattcaggatgcagggttgactcccagctcctgctcttaccaatgaatt
ggtagatatctgatgagctttgatgacatgctccgatcttaaagtacagc
aaggaaaggtgtaggaccaaatttgagctctactaaaaacacatgttaaa
aagaagaaaaaggaggagaaggaagaggaggagaggaagaagaagcagaa
gtagcagcacatatttccatggggtgaaacactagaaatataaccattcc
ataagcaggatcaacagtaagctataccattcattcctggatcatttaag
tgatggagagagtaagaataggtaccagagtctggggatttcatccaggg
ttgatggggacccagaagaggtagcagcttcagagtcttagaggatcctg
atgggagcatctggtaccaagttgtgttggaggaagagggagtgtgagtg
agggacagtgtggggaattgcaggctggtctccagttgagctgaggtctg
aaccccgatggtcataattcaccttcatgacaaggtaggcgttccctcat
gctcctggaactttggcccctgcctaatgtaccacctcccacagccccca
cagagaaacatggtcagtagtctcataagcaatggccttcaggctaaact
ccgccccccccagttacctagcaagagtgaagaccataaaaggggctgtt
aggcccccatctcgtgctcttactcctttgttccattacctctcactctc
tcactcctctctcctcttccctttctctttgtcttcttctttcctctcct
ctctctctctctttcctctctttctctctagcccccccctctcccccttc
tctcttctccctgtatttctataataaagctcttattcaatagagagtct
ctgcttctatcaagaccccacctgagcgctctggtcagtgttgtgaacct
tcttccctaattcccttctccttcatcaccctggggctttaagccaggta
gctccaggattccttgaataggagctgccctcttctttactctcctctct
gctcgtcagaggggctaagctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_77102164_77103376
seq2: B6Ng01-212P15.b_47_1274

seq1  GAATTCCAGAGCTAACAACAGTGAGATCATCCAAGTCCAAAGCTCCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGCTAACAACAGTGAGATCATCCAAGTCCAAAGCTCCAATT  50

seq1  CTTTGAAGTACAGGACTTCAGCCTAAGCATGCAATTTAGGAACAGCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGTACAGGACTTCAGCCTAAGCATGCAATTTAGGAACAGCTTCC  100

seq1  CAGAGGTGCATATGAATAGGCCTTGAAAGATGAATAGAGACTCTAAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTGCATATGAATAGGCCTTGAAAGATGAATAGAGACTCTAAAGAT  150

seq1  GAAAGACTCACAGCATACTCAAATCCAAAAGCACAAAAGATTGGGACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACTCACAGCATACTCAAATCCAAAAGCACAAAAGATTGGGACACC  200

seq1  AGTATGACACGTAGATGGAGCACAGGAAGGTACAAAAACCAGTAATGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGACACGTAGATGGAGCACAGGAAGGTACAAAAACCAGTAATGCCA  250

seq1  AAGAGATGAACTGAGGACCCCAGCACATATGTAGTAGATTTGCAGCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATGAACTGAGGACCCCAGCACATATGTAGTAGATTTGCAGCTCAG  300

seq1  TCTTCTCATGGGTCCCCCAACAACGAGAGCAGAGCTGTCCCTAAAGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCATGGGTCCCCCAACAACGAGAGCAGAGCTGTCCCTAAAGCTGA  350

seq1  TGTTTCTCTGTGGAATCTGTTCTCCTAATTGGGCTTCCTTATCTGGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTGTGGAATCTGTTCTCCTAATTGGGCTTCCTTATCTGGCCTC  400

seq1  AGTGGGAGAGGATGTGCCTAGCCCTGCAGAGACTTGATGTGCCAGGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAGAGGATGTGCCTAGCCCTGCAGAGACTTGATGTGCCAGGGTGG  450

seq1  GAGGATACCCAGGGGTGCTCTCACCCTCTCAGATGAGAAGAGGATGGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATACCCAGGGGTGCTCTCACCCTCTCAGATGAGAAGAGGATGGGGT  500

seq1  GTAAGAAAAGGGACTTTGTGAAGAGACCAGGAGGAGAGGCAATAATTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAAAGGGACTTTGTGAAGAGACCAGGAGGAGAGGCAATAATTGGG  550

seq1  ATGCAAAACAAATAAGCAAATAAATTAATGGAGGAAGAAAACAAAACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAACAAATAAGCAAATAAATTAATGGAGGAAGAAAACAAAACAGT  600

seq1  GATGCCTACATTAAATCAGGCTGGACAGATGCCAGAATTTTAACCTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTACATTAAATCAGGCTGGACAGATGCCAGAATTTTAACCTGTGT  650

seq1  ATTAAAGTCTGCCTCTATTTCGTTTACATTCCAGTGTAGAACTTGTAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGTCTGCCTCTATTTCGTTTACATTCCAGTGTAGAACTTGTAAGG  700

seq1  CCTATTATGTCTCCAGAACTGAAGAACATCTTCATGGAGGATCCCACACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTATGTCTCCAGAACTGAAGAACATCTTCATGGAGGATCCCACACT  750

seq1  GATGACACTCTATCATTACCAGCTCCTTGTGTTGAATTAGTCATTCCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACACTCTATCATTACCAGCTCCTTGTGTTGAATTAGTCATTCCCAC  800

seq1  ACAATTTTGTTTCTTCACCAGAAAAATAGAAATGCTAATACCTACATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTGTTTCTTCACCAGAAAAATAGAAATGCTAATACCTACATGAA  850

seq1  GCTATCAGACATATGCTTTGTAAGTCAATCTATTATCTCACAATCCTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCAGACATATGCTTTGTAAGTCAATCTATTATCTCACAATCCTAGT  900

seq1  TGAAT-GGTTCACTAACCTCCATTTTAAAGACAAGCTTATACCCC-AAAA  948
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGAATGGGTTCACTAACCTCCATTTTAAAGACAAGCTTATACCCCAAAAA  950

seq1  CATTAAACTCCCC-AAGGTCATGCAAATATTAGCTAGGGTATCATATATG  997
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATT-AACTCCCCAAAGGTCATGCAAATATTAGCTAGGGTATCATATATG  999

seq1  GGATCCTGGTGCTTTCTGATGCCAAAAGCTAGTGATACCT-GTGACTTTT  1046
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGATCCTGGTGCTTTCTGATGCCAAAAGCTAGTGATACCTGGTGACTTTT  1049

seq1  GTGGG-ACCCTTGAACTGTGGCAGATTGTAAACATCATA-TCAAAGAATT  1094
      ||||| ||||||||  ||||||||||||||||||||||| ||||||||||
seq2  GTGGGAACCCTTGACTTGTGGCAGATTGTAAACATCATATTCAAAGAATT  1099

seq1  CCTGTAGGTCATGGTAC-AAGAAGA-CTGTGGTGTTTTTTAATGAAGATT  1142
       ||||| |||||||||| ||||||| |||||| || |||| ||| |||||
seq2  TCTGTA-GTCATGGTACAAAGAAGACCTGTGG-GTGTTTTTATGGAGATT  1147

seq1  CCAGAAAGGGAC-ATAGAAACCACTCAGACAATCTGGGGTG-TTAG---C  1187
      |||||| || || || |||||||||||||| |||||||||| ||||   |
seq2  CCAGAAGGGAACAATGGAAACCACTCAGAC-ATCTGGGGTGTTTAGCCAC  1196

seq1  ACACTCATGAG---GAAAGGC---TGGCAGTG  1213
      || |||||| |   |||||||   ||||||||
seq2  ACTCTCATGTGAGAGAAAGGCCGTTGGCAGTG  1228