BAC Information

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BAC

Clone NameB6Ng01-213L17
Chromosome8 (Build37)
Map Location 44,305,851 - 44,415,258
singlet/doubletdoublet
Overlap geneZfp42
Upstream geneEG620772, LOC628212, Triml1, LOC622082, EG622117, LOC100039417
Downstream geneAdam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213L17.bB6Ng01-213L17.g
ACCGA031172GA031173
length984796
definitionB6Ng01-213L17.b B6Ng01-213L17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,305,851 - 44,306,832)(44,414,463 - 44,415,258)
sequence
gaattcagggcttaagacttctgttttacctggtttttcagctaaagact
gtatatgaaacaggaattcagaatttaaacaataactgtacttagaagta
tgttccaggaaagtcattgccttccatgttcttatagaaatgcagatgta
ggtatatttcatattcagagtaagcaatgactggaatataatatatttat
atatacttagcgtatataatactaaatatattctgattttattgtattta
tattgaatttatatgatataaaatatatacaaaagcagatttttttttct
aacgtagccatattggaaagagaaactaacctgagcaatgcccctgggtc
caacttgagatttaggtttaactagaaagcaagggagaagcttagctaag
cattacaggtctaagtgtggtcctgcctgtcaccatgatctctgttctgt
cattccggcaaggtggtctgacaagttgtcatagctgtgtgacatcgctt
cctgggagacgagctcctcctctggctggcaccaggcaggcgtcagcagc
ctttccttctccatcctgagattcttggaggtattccacactcctgggat
ccactgtttcagtggctccggatggctctgctggtgtctttgaggcgtgt
ttgtccctgacaggttgactacactcccaactctgctttcacactctact
ctggaggtgaactaggcatgtgtctggagtcatacctgggtgtgagcctg
cagtcattcttacactgttatttgtctttcctggaggtcttgtctcttca
cgttcttttgttagaagttgtgctttagtaagagttataagcatcaggct
acagatttgcctgctgttttttctgagactaggtttcgcaagtccaagct
gggcctgatcttgaactcagacagtctttctgcctcagtatcaaaaatga
ggggaataataaagtgtgtaagttgtggtgtgtg

gaattccaacatttctggcctctgcagacagctgcgctcacatgcatact
catacacatagttaaaaattaaaaataaatcttgtaataagtgaatggta
gtaagggccatgagaaaactgagtagggcaggctgtggggggaagggaat
tgcctccaatagttcatggtcacagcatgggtatctgtatactgaaggga
acagtgaggttgagaggggggaacgaaaatggagggtggggatatagctc
atacatggattttcttccagctgggcaaggtccaagatctgatcccgaga
acacgaaaccgggaacttaccgggaacttaagaataactcattttctttc
acttccgtttcctttgtttctctttgaggagtggatattcgttgaacaaa
gttttcaattaaacaaggtgactcaacactgaagactacaagagatgaag
ctgttgaggtgagcacagcccgaggcccacagtaccaagagggagagcga
agtgcataggcgcaggtgtagacatgctgggcagtaaaggacctgaaggt
ttctttctgactggttttatttctccttataatatgacacttagttgata
ggattaagaaggtgttaaggccagggcacggtggcacgggcctttagccc
cagcactctgaaggtgcatctctgagtttgaggccagcctagtctacaaa
gcgagtccaggacagccaaagttacacagagaatctctgtctcaaaaaaa
ggaaaaacaaaaacaaacaaaagagaggaggaggaggaggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44305851_44306832
seq2: B6Ng01-213L17.b_45_1028

seq1  GAATTCAGGGCTTAAGACTTCTGTTTTACCTGGTTTTTCAGCTAAAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCTTAAGACTTCTGTTTTACCTGGTTTTTCAGCTAAAGACT  50

seq1  GTATATGAAACAGGAATTCAGAATTTAAACAATAACTGTACTTAGAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGAAACAGGAATTCAGAATTTAAACAATAACTGTACTTAGAAGTA  100

seq1  TGTTCCAGGAAAGTCATTGCCTTCCATGTTCTTATAGAAATGCAGATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAGGAAAGTCATTGCCTTCCATGTTCTTATAGAAATGCAGATGTA  150

seq1  GGTATATTTCATATTCAGAGTAAGCAATGACTGGAATATAATATATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATTTCATATTCAGAGTAAGCAATGACTGGAATATAATATATTTAT  200

seq1  ATATACTTAGCGTATATAATACTAAATATATTCTGATTTTATTGTATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTAGCGTATATAATACTAAATATATTCTGATTTTATTGTATTTA  250

seq1  TATTGAATTTATATGATATAAAATATATACAAAAGCAGATTTTTTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAATTTATATGATATAAAATATATACAAAAGCAGATTTTTTTTTCT  300

seq1  AACGTAGCCATATTGGAAAGAGAAACTAACCTGAGCAATGCCCCTGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTAGCCATATTGGAAAGAGAAACTAACCTGAGCAATGCCCCTGGGTC  350

seq1  CAACTTGAGATTTAGGTTTAACTAGAAAGCAAGGGAGAAGCTTAGCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGAGATTTAGGTTTAACTAGAAAGCAAGGGAGAAGCTTAGCTAAG  400

seq1  CATTACAGGTCTAAGTGTGGTCCTGCCTGTCACCATGATCTCTGTTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGGTCTAAGTGTGGTCCTGCCTGTCACCATGATCTCTGTTCTGT  450

seq1  CATTCCGGCAAGGTGGTCTGACAAGTTGTCATAGCTGTGTGACATCGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCGGCAAGGTGGTCTGACAAGTTGTCATAGCTGTGTGACATCGCTT  500

seq1  CCTGGGAGACGAGCTCCTCCTCTGGCTGGCACCAGGCAGGCGTCAGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGACGAGCTCCTCCTCTGGCTGGCACCAGGCAGGCGTCAGCAGC  550

seq1  CTTTCCTTCTCCATCCTGAGATTCTTGGAGGTATTCCACACTCCTGGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTCTCCATCCTGAGATTCTTGGAGGTATTCCACACTCCTGGGAT  600

seq1  CCACTGTTTCAGTGGCTCCGGATGGCTCTGCTGGTGTCTTTGAGGCGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTTTCAGTGGCTCCGGATGGCTCTGCTGGTGTCTTTGAGGCGTGT  650

seq1  TTGTCCCTGACAGGTTGACTACACTCCCAACTCTGCTTTCACACTCTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCTGACAGGTTGACTACACTCCCAACTCTGCTTTCACACTCTACT  700

seq1  CTGGAGGTGAACTAGGCATGTGTCTGGAGTCATACCTGGGTGTGAGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGTGAACTAGGCATGTGTCTGGAGTCATACCTGGGTGTGAGCCTG  750

seq1  CAGTCATTCTTACACTGTTATTTGTCTTTCCTGGAGGTCTTGTCTCTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATTCTTACACTGTTATTTGTCTTTCCTGGAGGTCTTGTCTCTTCA  800

seq1  CGTTCTTTTGTTAGAAGTTGTGCTTTAGTAAGAGTTATAAGCATCAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTTTTGTTAGAAGTTGTGCTTTAGTAAGAGTTATAAGCATCAGGCT  850

seq1  ACAGA-TTGCCTGCTG-TTTTTCTGAGACTAGGTTTCGCAAGTCCAAGCT  898
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  ACAGATTTGCCTGCTGTTTTTTCTGAGACTAGGTTTCGCAAGTCCAAGCT  900

seq1  -GGCCTGATCTTGAACTCAGACAGTCTTTCTGCCTCAGTATCAAAAATGA  947
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGATCTTGAACTCAGACAGTCTTTCTGCCTCAGTATCAAAAATGA  950

seq1  GGGG-ATAATAAAGTGTGTAAGTGTGTGTGTGTGTG  982
      |||| |||||||||||||||||| |||| |||||||
seq2  GGGGAATAATAAAGTGTGTAAGT-TGTG-GTGTGTG  984


seq1: chr8_44414463_44415258
seq2: B6Ng01-213L17.g_66_861 (reverse)

seq1  CCTCCTCCTCCTCCTCCTCCTCTCTTTTGTTTGTTTTTGTTTTTCCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCCTCCTCCTCCTCTCTTTTGTTTGTTTTTGTTTTTCCTTTT  50

seq1  TTTGAGACAGAGATTCTCTGTGTAACTTTGGCTGTCCTGGACTCGCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACAGAGATTCTCTGTGTAACTTTGGCTGTCCTGGACTCGCTTTG  100

seq1  TAGACTAGGCTGGCCTCAAACTCAGAGATGCACCTTCAGAGTGCTGGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTAGGCTGGCCTCAAACTCAGAGATGCACCTTCAGAGTGCTGGGGC  150

seq1  TAAAGGCCCGTGCCACCGTGCCCTGGCCTTAACACCTTCTTAATCCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCCCGTGCCACCGTGCCCTGGCCTTAACACCTTCTTAATCCTATC  200

seq1  AACTAAGTGTCATATTATAAGGAGAAATAAAACCAGTCAGAAAGAAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGTGTCATATTATAAGGAGAAATAAAACCAGTCAGAAAGAAACCT  250

seq1  TCAGGTCCTTTACTGCCCAGCATGTCTACACCTGCGCCTATGCACTTCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCCTTTACTGCCCAGCATGTCTACACCTGCGCCTATGCACTTCGC  300

seq1  TCTCCCTCTTGGTACTGTGGGCCTCGGGCTGTGCTCACCTCAACAGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTTGGTACTGTGGGCCTCGGGCTGTGCTCACCTCAACAGCTTC  350

seq1  ATCTCTTGTAGTCTTCAGTGTTGAGTCACCTTGTTTAATTGAAAACTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTGTAGTCTTCAGTGTTGAGTCACCTTGTTTAATTGAAAACTTTG  400

seq1  TTCAACGAATATCCACTCCTCAAAGAGAAACAAAGGAAACGGAAGTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACGAATATCCACTCCTCAAAGAGAAACAAAGGAAACGGAAGTGAAA  450

seq1  GAAAATGAGTTATTCTTAAGTTCCCGGTAAGTTCCCGGTTTCGTGTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAGTTATTCTTAAGTTCCCGGTAAGTTCCCGGTTTCGTGTTCTC  500

seq1  GGGATCAGATCTTGGACCTTGCCCAGCTGGAAGAAAATCCATGTATGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCAGATCTTGGACCTTGCCCAGCTGGAAGAAAATCCATGTATGAGC  550

seq1  TATATCCCCACCCTCCATTTTCGTTCCCCCCTCTCAACCTCACTGTTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCCCACCCTCCATTTTCGTTCCCCCCTCTCAACCTCACTGTTCCC  600

seq1  TTCAGTATACAGATACCCATGCTGTGACCATGAACTATTGGAGGCAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTATACAGATACCCATGCTGTGACCATGAACTATTGGAGGCAATTC  650

seq1  CCTTCCCCCCACAGCCTGCCCTACTCAGTTTTCTCATGGCCCTTACTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCCCACAGCCTGCCCTACTCAGTTTTCTCATGGCCCTTACTACC  700

seq1  ATTCACTTATTACAAGATTTATTTTTAATTTTTAACTATGTGTATGAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTTATTACAAGATTTATTTTTAATTTTTAACTATGTGTATGAGTA  750

seq1  TGCATGTGAGCGCAGCTGTCTGCAGAGGCCAGAAATGTTGGAATTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGAGCGCAGCTGTCTGCAGAGGCCAGAAATGTTGGAATTC  796


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