BAC Information

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BAC

Clone NameB6Ng01-213P13
Chromosome8 (Build37)
Map Location 53,105,461 - 53,106,453
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667517, LOC623872
Downstream geneLOC100040220, LOC623935, 1190028D05Rik, LOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213P13.bB6Ng01-213P13.g
ACCGA031347GA031348
length1,1791,200
definitionB6Ng01-213P13.b B6Ng01-213P13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctttagctctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgaattctttgtatatattggatattagtccc
ctatctgatttagaataggtaaagatcctttcccaatctgttagtggcct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaatttta
taaggtcccatttgtcgattatcaatcttacagtacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatctttgaggcttttccttac
tttctcctctataagtttcactgtctctggttttatgtggagttccttga
tccacttagatttgactttagtacaaggagataggaatggatcaattcaa
aatcttctacatgataaccgccagttttgccagcaccatttcttgaaaat
actgtcttttttccactggatgttttttgctcccttgtcaaaggtcaagt
gactataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttatctgtcgctatactagtaccatgcagttttgatcacaattgc
tctgtagtacagctttaggtcaggcatagtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctggttttttgttattcagatgtt
tgcttcaacataggacatatttttcttatgaaatatatctaatctatgct
gctgccactataaattctggttgtcctcttgcagaggaagtttcttccca
gtcatttgttgttttctgatcttcccaatcccccctcaattagtctacta
tagtcagtccctcatttcttacattctgcatctccctttatcttgtatcc
cttttatttctttcatttttttcacctccttcacactaactcatttcttt
catccattttcaccttgcttttttcttcacccctcttctttcatctcaca
ttattgctaccatttatacaaataaccatttatttaaggaaactgattgg
ccaccattttttgtttatatgtcatatcaaatgtcaatcataatgttatc
ttacagcattattcaatctgaagaaaaaagcatgatattctcacctagat
ttcatttgacttatccaacagtctttatg

gaattcatgccagagatttatggttgattaaaaataaattgaacattttt
atctactataaaaaactgaagtaaaagaacatgatcatctgattagatgc
agaaagtatccctgaaaaaaattcaacctcatgtcatgataaagcgcaaa
gagattcaagatgcactaaacatacctaaacataaaaacagcaaattaca
gcaagccataaccaacatcaactttaatggagagaagttcaaagcaatcc
aactaaaatcagaataaaggatgtctaattgttatttacctatttaccaa
agtacttgaagtcttagctaccacagcaagacaactgaaatagaatacaa
atgaaaaagagagaggctaaagtatttctatctgcagatatgttagcata
tatgtgacctgaaccttccactgggaaactcttacaactgataaacaatt
ttagcaaactagctggtataagattagttcatgaaactcagcatctccta
tcatgtcatatgcaaacatgacagactggaaatgaagtcaggaatccaac
agcttttggaatatcctcaaatataaccatatattattttcagttaactg
taattaatcaagtggaatatatatacatacatatatatatatgcttatat
ttttaaaataatatgtgctcttaaatgtttttaaactcccttccagccta
ccaccctccagagatattggaaaggaaaggttataagggcaaaagaggaa
gtgattctgtttagaaataattccatggagtgaatcttacctgtgttgtc
aggatataggtagttcagttcatatgactcaacagtagcagcttgatcca
cacgcaaacaccttttatgaatcaacaattacagttaaaccagaataaac
tgctaggctctgtcaatcagcatcagaagctgcaaaaatcaactagaata
catcagaagttctttggtgcattctctatatgaatttacagcaaatgatg
accagtgtcagcaaagtacaatgatgaccagaaaagatggactgagtatc
aacatccaccacagcatcactcataggctgtagggtatattatacccctt
caacaaacaatgtttctccagtatatcattttgtcctgctgctcgaacac
ctctgtcttccctcagcaaaccattttcctatcgtgtctacacgtcgacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53105461_53106453
seq2: B6Ng01-213P13.b_238_1223

seq1  AATTTTATAAGGTCCCATTTGTCGATTATCAATCTTACAGTACAAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATAAGGTCCCATTTGTCGATTATCAATCTTACAGTACAAGCCAT  50

seq1  TGCTGTTCTATTCAGGAATTTTTCCCCTGTACCCATATCTTTGAGGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCTATTCAGGAATTTTTCCCCTGTACCCATATCTTTGAGGCTTT  100

seq1  TCCTTACTTTCTCCTCTATAAGTTTCACTGTCTCTGGTTTTATGTGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACTTTCTCCTCTATAAGTTTCACTGTCTCTGGTTTTATGTGGAGT  150

seq1  TCCTTGATCCACTTAGATTTGACTTTAGTACAAGGAGATAGGAATGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGATCCACTTAGATTTGACTTTAGTACAAGGAGATAGGAATGGATC  200

seq1  AATTCAAAATCTTCTACATGATAACCGCCAGTTTTGCCAGCACCATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAAATCTTCTACATGATAACCGCCAGTTTTGCCAGCACCATTTCT  250

seq1  TGAAAATACTGTCTTTTTTCCACTGGATGTTTTTTGCTCCCTTGTCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATACTGTCTTTTTTCCACTGGATGTTTTTTGCTCCCTTGTCAAAG  300

seq1  GTCAAGTGACTATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTGACTATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATT  350

seq1  CCATTGGTCTACTTATCTGTCGCTATACTAGTACCATGCAGTTTTGATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGTCTACTTATCTGTCGCTATACTAGTACCATGCAGTTTTGATCA  400

seq1  CAATTGCTCTGTAGTACAGCTTTAGGTCAGGCATAGTGATTCCACCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCTCTGTAGTACAGCTTTAGGTCAGGCATAGTGATTCCACCAGAG  450

seq1  GTTCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTGGTTTTTTGTTATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTGGTTTTTTGTTATTC  500

seq1  AGATGTTTGCTTCAACATAGGACATATTTTTCTTATGAAATATATCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTTGCTTCAACATAGGACATATTTTTCTTATGAAATATATCTAAT  550

seq1  CTATGCTGCTGCCACTATAAATTCTGGTTGTCCTCTTGCAGAGGAAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTGCTGCCACTATAAATTCTGGTTGTCCTCTTGCAGAGGAAGTTT  600

seq1  CTTCCCAGTCATTTGTTGTTTTCTGATCTTCCCAATCCCCCCTCAATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGTCATTTGTTGTTTTCTGATCTTCCCAATCCCCCCTCAATTAG  650

seq1  TCTACTATAGTCAGTCCCTCATTTCTTACATTCTGCATCTCCCTTTATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTATAGTCAGTCCCTCATTTCTTACATTCTGCATCTCCCTTTATCT  700

seq1  TGTATCCCTTTTATTTCTTTCATTTTTTTCACCTCCTTCACACTAACTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCCTTTTATTTCTTTCATTTTTTTCACCTCCTTCACACTAACTCA  750

seq1  -TTCTTTCATCCATTTTCA-CTTGCTTTTTTCTTCACCCCTCTCCTTTCA  798
       |||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  TTTCTTTCATCCATTTTCACCTTGCTTTTTTCTTCACCCCTCTTCTTTCA  800

seq1  TCTCAACATATTGCTACCAATTTATACAAATAAACCATTTATTTAAGGAA  848
      |||||   |||||||||| |||||||||||| |||||||||||||||| |
seq2  TCTCACATTATTGCTACC-ATTTATACAAAT-AACCATTTATTTAAGG-A  847

seq1  AACTGAGTGGCCAC--ATTTTTGTTTATATGTCATATTCCAAATGTCAAT  896
      |||||| |||||||   ||||||||||||||||||||  |||||||||||
seq2  AACTGATTGGCCACCATTTTTTGTTTATATGTCATAT--CAAATGTCAAT  895

seq1  CATTAGTGTATACTTACAGCATTA-TCAAACTGAAAGAAAAAAAAGGCAT  945
      || || |||   |||||||||||| |||| ||| |||||||||   ||||
seq2  CA-TAATGTTATCTTACAGCATTATTCAATCTG-AAGAAAAAA---GCAT  940

seq1  GATTATCTCA-CTAGATATCAATTTGACCTAATCCAACAAATCTTTATG  993
      |||  ||||| |||||| || |||||| || ||||||| | ||||||||
seq2  GATATTCTCACCTAGATTTC-ATTTGA-CTTATCCAAC-AGTCTTTATG  986


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