BAC Information

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BAC

Clone NameB6Ng01-214A23
Chromosome8 (Build37)
Map Location 6,169,164 - 6,170,191
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623409, LOC669429, LOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214A23.bB6Ng01-214A23.g
ACCGA031412GA031413
length1,0421,199
definitionB6Ng01-214A23.b B6Ng01-214A23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaaaatgaaatcctaactagcacctgatggtaattagcaacat
ctgccctgattctatcaagggaaattgaatataagtccccgtgctccaga
catttttatgtctatttagctttttgggaaacagggcattcggctttgag
cctctatcactagacttctgctcataagacagagtacatggaatggaagt
cacaggcagacctaggcaacagcaaccacaatcaaattttaggagcattc
ctacagaatgccatacttacacagcgtctacctttagcgatagaagacct
ctgttttctctctttgtggtatagactaaatttcctagtagtgctttgca
atgtaaacatttcattaatattacccaattaaccacatagaagacaattg
caaacatttccaacagcctagtattttgacaggacactaacctaattctt
ttggtgtcttccctcagctgctgacactgaacttgcctttgtttatgaaa
gctgtatatcaagacagctaatgctttcaacttcattgttcacattgaca
gcctgtatagaaatgtttacagtttaggaaaaaatattattgcatgatta
atgttttcccagtttgttaatatgttattataaagtatgtgcattcataa
tcattgcttatatatgaacagaacacctagtttatataaatattaaacat
tgcagatgatatctcctttttttttttttttttttttttttttttcccga
agacagggtttctctgtgtagtgctggctgtcctggaaactcactttaat
agaccaggctggcctcgaaattcagaaaatccacctgccctctgcctctc
aagtgctggggattaaaggcatgcgccaaccacgccccaacgatatcctc
cttttattttggaaatggtttcttggattgcatcccacatacagaacaat
agaaccacattggtcacagtaaagccacttctgaaatgaattgtcctgaa
tatgggactcagcctcacttgatacccattggcctttatttg

gaattctcacctgaggaataccgaatggcagagaagcacctaaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactaccatatccgggaatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatggccccaa
tgaagagctagagaaagtaccaaagaagctaaagggatctgcaaccctat
agtggaacaacattatgaactaccagtaccctgagctctgactctagcct
gcatatgcatcaaaagaattgcttagtcgccattcacctggaaagagaga
ggctcaattgacacgcaacctttatatgtcctagtacaggtaacgtcaag
tccataaacggagtgggtgagtatagacggcgacacgtctctcccactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6169164_6170191
seq2: B6Ng01-214A23.b_45_1086 (reverse)

seq1  CAAATAAA-GACAATGGGTATCAAGTGA-GCTGAAGTACCATTATTCAGG  48
      |||||||| | ||||||||||||||||| |||| ||| ||| ||||||||
seq2  CAAATAAAGGCCAATGGGTATCAAGTGAGGCTG-AGTCCCA-TATTCAGG  48

seq1  ACAATTCA-TTCAG-AGTGGCTTTACTGTGA-CAATGT-GTTCTATTGTT  94
      |||||||| ||||| |||||||||||||||| |||||| |||||||||||
seq2  ACAATTCATTTCAGAAGTGGCTTTACTGTGACCAATGTGGTTCTATTGTT  98

seq1  CTGTATTGTGTGAATGC-ATTCAAGAAACCATTT-CAAAATAAAAGGA-G  141
      ||||| |||| | |||| || ||||||||||||| ||||||||||||| |
seq2  CTGTA-TGTG-GGATGCAATCCAAGAAACCATTTCCAAAATAAAAGGAGG  146

seq1  ATATCGTT-GGGCGTGG-TGGCGCATGCCTTTAAT-CCCAGCACTTGGGA  188
      |||||||| |||||||| ||||||||||||||||| ||||||||||| ||
seq2  ATATCGTTGGGGCGTGGTTGGCGCATGCCTTTAATCCCCAGCACTTGAGA  196

seq1  GGCAGA-GGCAGGTGGA-TTTCTG-AGTTCGAGGCCAGCCTGGTCTA-TA  234
      |||||| |||||||||| |||||| | |||||||||||||||||||| ||
seq2  GGCAGAGGGCAGGTGGATTTTCTGAATTTCGAGGCCAGCCTGGTCTATTA  246

seq1  AAGTGAG-TTCCAGGACAGCCAGCACTACACAGAGAAACCCTGTC-TCGG  282
      ||||||| ||||||||||||||||||||||||||||||||||||| ||||
seq2  AAGTGAGTTTCCAGGACAGCCAGCACTACACAGAGAAACCCTGTCTTCGG  296

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGATATCATCTGCAATGT  332
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGATATCATCTGCAATGT  346

seq1  TTAATATTTATATAAACTAGGTGTTCTGTTCATATATAAGCAATGATTAT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTTATATAAACTAGGTGTTCTGTTCATATATAAGCAATGATTAT  396

seq1  GAATGCACATACTTTATAATAACATATTAACAAACTGGGAAAACATTAAT  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCACATACTTTATAATAACATATTAACAAACTGGGAAAACATTAAT  446

seq1  CATGCAATAATATTTTTTCCTAAACTGTAAACATTTCTATACAGGCTGTC  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAATAATATTTTTTCCTAAACTGTAAACATTTCTATACAGGCTGTC  496

seq1  AATGTGAACAATGAAGTTGAAAGCATTAGCTGTCTTGATATACAGCTTTC  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAACAATGAAGTTGAAAGCATTAGCTGTCTTGATATACAGCTTTC  546

seq1  ATAAACAAAGGCAAGTTCAGTGTCAGCAGCTGAGGGAAGACACCAAAAGA  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAAGGCAAGTTCAGTGTCAGCAGCTGAGGGAAGACACCAAAAGA  596

seq1  ATTAGGTTAGTGTCCTGTCAAAATACTAGGCTGTTGGAAATGTTTGCAAT  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTTAGTGTCCTGTCAAAATACTAGGCTGTTGGAAATGTTTGCAAT  646

seq1  TGTCTTCTATGTGGTTAATTGGGTAATATTAATGAAATGTTTACATTGCA  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTATGTGGTTAATTGGGTAATATTAATGAAATGTTTACATTGCA  696

seq1  AAGCACTACTAGGAAATTTAGTCTATACCACAAAGAGAGAAAACAGAGGT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTACTAGGAAATTTAGTCTATACCACAAAGAGAGAAAACAGAGGT  746

seq1  CTTCTATCGCTAAAGGTAGACGCTGTGTAAGTATGGCATTCTGTAGGAAT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATCGCTAAAGGTAGACGCTGTGTAAGTATGGCATTCTGTAGGAAT  796

seq1  GCTCCTAAAATTTGATTGTGGTTGCTGTTGCCTAGGTCTGCCTGTGACTT  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAAAATTTGATTGTGGTTGCTGTTGCCTAGGTCTGCCTGTGACTT  846

seq1  CCATTCCATGTACTCTGTCTTATGAGCAGAAGTCTAGTGATAGAGGCTCA  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCATGTACTCTGTCTTATGAGCAGAAGTCTAGTGATAGAGGCTCA  896

seq1  AAGCCGAATGCCCTGTTTCCCAAAAAGCTAAATAGACATAAAAATGTCTG  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCGAATGCCCTGTTTCCCAAAAAGCTAAATAGACATAAAAATGTCTG  946

seq1  GAGCACGGGGACTTATATTCAATTTCCCTTGATAGAATCAGGGCAGATGT  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACGGGGACTTATATTCAATTTCCCTTGATAGAATCAGGGCAGATGT  996

seq1  TGCTAATTACCATCAGGTGCTAGTTAGGATTTCATTTTAAGAATTC  1028
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATTACCATCAGGTGCTAGTTAGGATTTCATTTTAAGAATTC  1042


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