BAC Information

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BAC

Clone NameB6Ng01-215B07
Chromosome8 (Build37)
Map Location 79,557,300 - 79,745,273
singlet/doubletdoublet
Overlap geneNr3c2
Upstream geneLOC100039185, EG631594, LOC666226, LOC100039211, LOC384847
Downstream geneArhgap10, LOC100039235, AI931714, Tmem34, Ednra, EG622803, Ttc29
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215B07.bB6Ng01-215B07.g
ACCGA032154GA032155
length9741,029
definitionB6Ng01-215B07.b B6Ng01-215B07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,557,300 - 79,558,262)(79,744,260 - 79,745,273)
sequence
gaattctcccttacacctgtgtagcctggagaagttggggacattcagtc
tcttccttttgaaagaccagccagtaatatcttccacatccctcagattt
cagcatttgctatgagtactttttctaagtgtttgatgttttcttagctg
ccttagcttttctgaaatgttaatgaagtatttttgcattcatataaaag
actgagaaggactttaacaaaatcttactgtcacacaccaggtaaacgtt
ttcacatagagaacttagtggctaatttaaaagtactttcatacatcaac
atttgaagagtgagacaggtttaaatttataagcaaataaatttaaatcc
ttgaaaagacctcccccttctctctcactccctgccccctctctccctcc
ctttccctctccctcccccctctctctttctccctctctacctccctttg
tatatgtgtgagtgtgtgttcacttacatgtgtctccctctgtgtgtttt
gaaagatttcaagaaatccgctttgtgctcaaagatgaatgttattggat
gatagcccacagacttgctacattatgaaacgtttcatatcttgagtaaa
ttaaacatcatgttttatctcattttagtgtgtattgcttattccattta
gctggtaataaaaaacatcctgggtcatttaacaagtaattaagaagacc
acttgctatatcttgctttttagaaggtattgatttttatttgttgtggg
gtagtgatgcatttgtttgtctgtgttttatagctttctagtagttaaaa
ggtgaaatgttatcaaaataagaaaaaaacattttattcagcagcaatat
tttaatttgtgcaactgatctgtagctaaaagacatgctttccaacacac
acacacacacacatagcccttttgcaaattttgctgaactgtaaaactaa
acagaaactctgagagaagaaagt
gaattcccatgcacttcccagggttcccctagaattcccatgcacttccc
agggttcccctggaattcccatgcacttcccagggttcccctggaattcc
catgcacttcccagggttcccctggaattcccatgcacttcccagggttt
ctctggaatttccatgcacttcccagggttcccctggaattcccgtgcac
ttcccagggttcccctggaattcccgtgcacttcccagggttcctctgga
attcccgtgcacttcccagggttcatgttcagggaaaaccaaactgaaac
ataaaaatgtgtttctataacagcagatacaaggaaggacagagctgtgg
aaggaagacaagaagagtctgtggccttggctgatctgagggcttccaga
cacagcaccaaaaacatgagtggtaaagccagcaacagcccctgaattcc
tctgctggaaatgccaccaaatggcatccctgtggcagggtcctgctgcc
aggaagaggtgcagaggctttctgaggtggggcctagtgggaagtctgta
gctctctggaggtatgtgtgcactcaaagcctatcgatcatgggagccaa
gtctctttctttctgtggctccctaaaatctcggaggtttttacttggct
acaactccctgccatgatgtgctgccacagtactggccgaagcagcaagt
caaccagtcaggatagggtgtccctgaaaatggcaagcaaaataactgct
ttctttttacaagttgatgatctcaaacatctgccatagaaaaaaagcca
gagtactttgctacacttaaaaaaatccttctaggctgggaagatgactt
ggagagtaaaagagctttgttgtgcaaatgtgaggacctgagcttggaac
ccctggagccatagaaaccactgagtacatggtgtggagcctagagtttg
taatccccagagttcctccagggagaatgagatgcagagactttccaatc
ctctgaaagcctctggtggcttactaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_79557300_79558262
seq2: B6Ng01-215B07.b_48_1021

seq1  GAATTCTCCCTTACACCTGTGTAGCCTGGAGAAGTTGGTGACATTCAGTC  50
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAATTCTCCCTTACACCTGTGTAGCCTGGAGAAGTTGGGGACATTCAGTC  50

seq1  TCTTCCTTTTGAAAGACCAGCCAGTAATATCTTCCACATCCCTCAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTTGAAAGACCAGCCAGTAATATCTTCCACATCCCTCAGATTT  100

seq1  CAGCATTTGCTATGAGTACTTTTTCTAAGTGTTTGATGTTTTCTTAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTGCTATGAGTACTTTTTCTAAGTGTTTGATGTTTTCTTAGCTG  150

seq1  CCTTAGCTTTTCTGAAATGTTAATGAAGTATTTTTGCATTCATATAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGCTTTTCTGAAATGTTAATGAAGTATTTTTGCATTCATATAAAAG  200

seq1  ACTGAGAAGGACTTTAACAAAATCTTACTGTCACACACCAGGTAAACGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAAGGACTTTAACAAAATCTTACTGTCACACACCAGGTAAACGTT  250

seq1  TTCACATAGAGAACTTAGTGGCTAATTTAAAAGTACTTTCATACATCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATAGAGAACTTAGTGGCTAATTTAAAAGTACTTTCATACATCAAC  300

seq1  ATTTGAAGAGTGAGACAGGTTTAAATTTATAAGCAAATAAATTTAAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGAGTGAGACAGGTTTAAATTTATAAGCAAATAAATTTAAATCC  350

seq1  TTGAAAAGACCTCCCCCTTCTCTCTCACTCCCTGCCCCCTCTCTCCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGACCTCCCCCTTCTCTCTCACTCCCTGCCCCCTCTCTCCCTCC  400

seq1  CTTTCCCTCTCCCTCCCCCCTCTCTCTTTCTCCCTCTCTACCTCCCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTCTCCCTCCCCCCTCTCTCTTTCTCCCTCTCTACCTCCCTTTG  450

seq1  TATATGTGTGAGTGTGTGTTCACTTACATGTGTCTCCCTCTGTGTGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGTGAGTGTGTGTTCACTTACATGTGTCTCCCTCTGTGTGTTTT  500

seq1  GAAAGATTTCAAGAAATCCGCTTTGTGCTCAAAGATGAATGTTATTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATTTCAAGAAATCCGCTTTGTGCTCAAAGATGAATGTTATTGGAT  550

seq1  GATAGCCCACAGACTTGCTACATTATGAAACGTTTCATATCTTGAGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCCACAGACTTGCTACATTATGAAACGTTTCATATCTTGAGTAAA  600

seq1  TTAAACATCATGTTTTATCTCATTTTAGTGTGTATTGCTTATTCCATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATCATGTTTTATCTCATTTTAGTGTGTATTGCTTATTCCATTTA  650

seq1  GCTGGTAATAAAAAACATCCTGGGTCATTTAACAAGTAATTAAGAAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTAATAAAAAACATCCTGGGTCATTTAACAAGTAATTAAGAAGACC  700

seq1  ACTTGCTATATCTTGC-TTTTAGAAGGTATTGA-TTTTATTTGTTGTGGG  748
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  ACTTGCTATATCTTGCTTTTTAGAAGGTATTGATTTTTATTTGTTGTGGG  750

seq1  GTAGTGATGCATTTG-TTGTCTGTG-TTTATAGC-TTCTAGTAGTTAAAA  795
      ||||||||||||||| ||||||||| |||||||| |||||||||||||||
seq2  GTAGTGATGCATTTGTTTGTCTGTGTTTTATAGCTTTCTAGTAGTTAAAA  800

seq1  GGTGAAATGTTATCAAAATAAGAAAAAAACATTTTTATCAGCAGCAATAT  845
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  GGTGAAATGTTATCAAAATAAGAAAAAAACATTTTATTCAGCAGCAATAT  850

seq1  TT--AATTGTGCAACTGATCTGTAGCT-AAAGACATGCTTTCCAACACAC  892
      ||  | ||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTAATTTGTGCAACTGATCTGTAGCTAAAAGACATGCTTTCCAACACAC  900

seq1  ACACACACACACATAG-CCTTTTGCAAA-TTTGCTGAACTGTAAAACTAA  940
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  ACACACACACACATAGCCCTTTTGCAAATTTTGCTGAACTGTAAAACTAA  950

seq1  ACAG-AACTCTGAGAGAAGAAAGT  963
      |||| |||||||||||||||||||
seq2  ACAGAAACTCTGAGAGAAGAAAGT  974

seq1: chr8_79744260_79745273
seq2: B6Ng01-215B07.g_66_1094 (reverse)

seq1  GGTTAGT-AGCCA-CAGA-GCTTTCAGA-GAT--GGAAGTCTCTGCCTCT  44
      ||||||| ||||| |||| ||||||||| |||  | |||||||||| |||
seq2  GGTTAGTAAGCCACCAGAGGCTTTCAGAGGATTGGAAAGTCTCTGCATCT  50

seq1  CA-TCTCCCTGGAGGAACTCT-GGGATTACAAACTCTA-GCT-CACACCA  90
      || |||||||||||||||||| |||||||||||||||| ||| |||||||
seq2  CATTCTCCCTGGAGGAACTCTGGGGATTACAAACTCTAGGCTCCACACCA  100

seq1  TGTACTCAGT-GTTTCTATGGCTCCAGGGG-TCCAAGCTCAGGTCCTCAC  138
      |||||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  TGTACTCAGTGGTTTCTATGGCTCCAGGGGTTCCAAGCTCAGGTCCTCAC  150

seq1  ATTTGCACAAC-AAGCTCTTTTACTCTCC-AGTCATCTTCCCAGCCTAGA  186
      ||||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  ATTTGCACAACAAAGCTCTTTTACTCTCCAAGTCATCTTCCCAGCCTAGA  200

seq1  AGGATTTTTTTAAGTGTAGC-AAGTACTCTGGCTTTTTTTACTATGGCAG  235
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  AGGATTTTTTTAAGTGTAGCAAAGTACTCTGGCTTTTTTT-CTATGGCAG  249

seq1  ATGTTTGAGATCATCAACTTGTAAAAAGAAAGCAGTTATTTTGCTTGCCA  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGAGATCATCAACTTGTAAAAAGAAAGCAGTTATTTTGCTTGCCA  299

seq1  -TTTCAGGGACACCCTATCCTGACTGGTTGACTTGCTGCTTCGGCCAGTA  334
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGGACACCCTATCCTGACTGGTTGACTTGCTGCTTCGGCCAGTA  349

seq1  CTGTGGCAGCACATCATGGCAGGGAGTTGTAGCCAAGTAAAAACCTCCGA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCAGCACATCATGGCAGGGAGTTGTAGCCAAGTAAAAACCTCCGA  399

seq1  GATTTTAGGGAGCCACAGAAAGAAAGAGACTTGGCTCCCATGATCGATAG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAGGGAGCCACAGAAAGAAAGAGACTTGGCTCCCATGATCGATAG  449

seq1  GCTTTGAGTGCACACATACCTCCAGAGAGCTACAGACTTCCCACTAGGCC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAGTGCACACATACCTCCAGAGAGCTACAGACTTCCCACTAGGCC  499

seq1  CCACCTCAGAAAGCCTCTGCACCTCTTCCTGGCAGCAGGACCCTGCCACA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCAGAAAGCCTCTGCACCTCTTCCTGGCAGCAGGACCCTGCCACA  549

seq1  GGGATGCCATTTGGTGGCATTTCCAGCAGAGGAATTCAGGGGCTGTTGCT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCCATTTGGTGGCATTTCCAGCAGAGGAATTCAGGGGCTGTTGCT  599

seq1  GGCTTTACCACTCATGTTTTTGGTGCTGTGTCTGGAAGCCCTCAGATCAG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTACCACTCATGTTTTTGGTGCTGTGTCTGGAAGCCCTCAGATCAG  649

seq1  CCAAGGCCACAGACTCTTCTTGTCTTCCTTCCACAGCTCTGTCCTTCCTT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCCACAGACTCTTCTTGTCTTCCTTCCACAGCTCTGTCCTTCCTT  699

seq1  GTATCTGCTGTTATAGAAACACATTTTTATGTTTCAGTTTGGTTTTCCCT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGCTGTTATAGAAACACATTTTTATGTTTCAGTTTGGTTTTCCCT  749

seq1  GAACATGAACCCTGGGAAGTGCACGGGAATTCCAGAGGAACCCTGGGAAG  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGAACCCTGGGAAGTGCACGGGAATTCCAGAGGAACCCTGGGAAG  799

seq1  TGCACGGGAATTCCAGGGGAACCCTGGGAAGTGCACGGGAATTCCAGGGG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGGGAATTCCAGGGGAACCCTGGGAAGTGCACGGGAATTCCAGGGG  849

seq1  AACCCTGGGAAGTGCATGGAAATTCCAGAGAAACCCTGGGAAGTGCATGG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGGGAAGTGCATGGAAATTCCAGAGAAACCCTGGGAAGTGCATGG  899

seq1  GAATTCCAGGGGAACCCTGGGAAGTGCATGGGAATTCCAGGGGAACCCTG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGGAACCCTGGGAAGTGCATGGGAATTCCAGGGGAACCCTG  949

seq1  GGAAGTGCATGGGAATTCCAGGGGAACCCTGGGAAGTGCATGGGAATTCT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGCATGGGAATTCCAGGGGAACCCTGGGAAGTGCATGGGAATTCT  999

seq1  AGGGGAACCCTGGGAAGTGCATGGGAATTC  1014
      ||||||||||||||||||||||||||||||
seq2  AGGGGAACCCTGGGAAGTGCATGGGAATTC  1029