BAC Information

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BAC

Clone NameB6Ng01-215B14
Chromosome8 (Build37)
Map Location 52,698,234 - 52,699,397
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039966, LOC667517
Downstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215B14.bB6Ng01-215B14.g
ACCGA032164GA032165
length1,1621,141
definitionB6Ng01-215B14.b B6Ng01-215B14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcataagatcaccatgattttgtgaaatttatttcagcaaaca
tgatttaccaccttgaactagaagaggctatgtgattgcaaaatgacaca
agttttgatccctcccctacatatacacaaacaaacatataaaaaaatca
aacaacaacaaaaacccaccaccaacaacaagaaaaacctaagcataaag
aaaagccttggcactactctgttgcaatagtagacatactgcaggaaagc
tacgattactgatagatcagaaggaagcaaaacaaagacgggtcagccca
aaacagtggattgtttctgggtaataagacccatttaacacttgttgcct
ggattccacagctattattcatcacttgcttcactgcctacttaatctcc
tttgacctgattgtctacaaccggtaatttttttctttctctttattatg
acattttgaaggggagatagagaaatggtaggtaagagaaaacatgggta
ttaaaacacagactcttaaagttagagagctgtctcagtggttaagagca
ctggctgctcttccagaggacctgggttcaattcccagcacccacatagc
agctcacaactgcctgtatctccggctcaagggaatccaacaccctcaga
gacatgcatgtaagtaaaacacagactcttgaattctatctgtctacata
caactaattgtatattacacctaggaaatttatgcctatctgatttcaat
tttgaactttaaggttgtatgatttagataagatttggagcaggtgctaa
tgagaagataagttggttacagtttaagactgggatggtgctctcatgct
atgcagcacttggggacatctgaaagggatgaggatgctttccagatttg
agaaatgtaaacagtgggtgttagaaggcagattgtcacaaataggaatt
atcaggtggtctctaggtttgggatcctattctaatttacacctgaaaga
atcaattcttttggactggtgatatggaatcttgacatgtgacaaaagaa
ccttctcttggctagttgtgaaatattaacagaacggtatttagatcgta
gttagagtacagtcgcattacggtttacagcctacgaactctcagattct
ttttcaaatgga
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgccctctagtgagtctagctaagggcttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattcttgaa
tagttcttcttgttccacttggttaatttcacccctgagtttgattattt
cctgcagtctactccctcttgggttgaatttgctttcctttttttctagc
gctttagatgtgttgtcaagctgcttagtatgtgctctctcccgtttctt
tcttggaaggtactcagagctatgagtttccctcctagacattgctttca
ttggtgtccaaaggtttggtacgatggtgcttcattttcattaaacttct
aaaaagttctaaatttctttctttaatcttcttgacaagaatattgaaaa
gaaggttgttccgatttccatgtaagtgtttggcctgcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52698234_52699397
seq2: B6Ng01-215B14.b_48_1209

seq1  GAATTCCTCATAAGATCACCATGATTTTGTGAAATTTATTTCAGCAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATAAGATCACCATGATTTTGTGAAATTTATTTCAGCAAACA  50

seq1  TGATTTACCACCTTGAACTAGAAGAGGCTATGTGATTGCAAAATGACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTACCACCTTGAACTAGAAGAGGCTATGTGATTGCAAAATGACACA  100

seq1  AGTTTTGATCCCTCCCCTACATATACACAAACAAACATATAAAAAAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGATCCCTCCCCTACATATACACAAACAAACATATAAAAAAATCA  150

seq1  AACAACAACAAAAACCCACCACCAACAACAAGAAAAACCTAAGCATAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAAAAACCCACCACCAACAACAAGAAAAACCTAAGCATAAAG  200

seq1  AAAAGCCTTGGCACTACTCTGTTGCAATAGTAGACATACTGCAGGAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTTGGCACTACTCTGTTGCAATAGTAGACATACTGCAGGAAAGC  250

seq1  TACGATTACTGATAGATCAGAAGGAAGCAAAACAAAGACGGGTCAGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATTACTGATAGATCAGAAGGAAGCAAAACAAAGACGGGTCAGCCCA  300

seq1  AAACAGTGGATTGTTTCTGGGTAATAAGACCCATTTAACACTTGTTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTGGATTGTTTCTGGGTAATAAGACCCATTTAACACTTGTTGCCT  350

seq1  GGATTCCACAGCTATTATTCATCACTTGCTTCACTGCCTACTTAATCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCCACAGCTATTATTCATCACTTGCTTCACTGCCTACTTAATCTCC  400

seq1  TTTGACCTGATTGTCTACAACCGGTAATTTTTTTCTTTCTCTTTATTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCTGATTGTCTACAACCGGTAATTTTTTTCTTTCTCTTTATTATG  450

seq1  ACATTTTGAAGGGGAGATAGAGAAATGGTAGGTAAGAGAAAACATGGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGAAGGGGAGATAGAGAAATGGTAGGTAAGAGAAAACATGGGTA  500

seq1  TTAAAACACAGACTCTTAAAGTTAGAGAGCTGTCTCAGTGGTTAAGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACACAGACTCTTAAAGTTAGAGAGCTGTCTCAGTGGTTAAGAGCA  550

seq1  CTGGCTGCTCTTCCAGAGGACCTGGGTTCAATTCCCAGCACCCACATAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGCTCTTCCAGAGGACCTGGGTTCAATTCCCAGCACCCACATAGC  600

seq1  AGCTCACAACTGCCTGTATCTCCGGCTCAAGGGAATCCAACACCCTCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACAACTGCCTGTATCTCCGGCTCAAGGGAATCCAACACCCTCAGA  650

seq1  GACATGCATGTAAGTAAAACACAGACTCTTGAATTCTATCTGTCTACATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCATGTAAGTAAAACACAGACTCTTGAATTCTATCTGTCTACATA  700

seq1  CAACTAATTGTATATTACACCTAGGAAATTTATGCCTATCTGATTTCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAATTGTATATTACACCTAGGAAATTTATGCCTATCTGATTTCAAT  750

seq1  TTTGAACTTTAAGGTTGTATGATTTAGATAAGATTTGGAGCAGGTGCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACTTTAAGGTTGTATGATTTAGATAAGATTTGGAGCAGGTGCTAA  800

seq1  TGAGAAGATAAGTTGGTTACAGTTTAAAGACTGGGATGGTGCTCTCATGC  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGAGAAGATAAGTTGGTTACAGTTT-AAGACTGGGATGGTGCTCTCATGC  849

seq1  TATGCAGCACTTGGGGACATCTGAAAGGGATGAGGATGCTTTCCAGATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGCACTTGGGGACATCTGAAAGGGATGAGGATGCTTTCCAGATTT  899

seq1  GAGAAATGTAAACAGTGGGTGTTAGAAGGCAGAATGTCACAAATAGGAA-  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  GAGAAATGTAAACAGTGGGTGTTAGAAGGCAGATTGTCACAAATAGGAAT  949

seq1  TATCAGGTGGCCCCAAGGTTTGGGATCCTATTCT-ATTTACACCTGAAAG  998
      |||||||||| | | ||||||||||||||||||| |||||||||||||||
seq2  TATCAGGTGGTCTCTAGGTTTGGGATCCTATTCTAATTTACACCTGAAAG  999

seq1  AATCCAATTCTTTT-GACTGTGG--ATGGAATCTGGACATGTGACAAAGA  1045
      ||| |||||||||| |||||  |  ||||||||| |||||||||||||  
seq2  AAT-CAATTCTTTTGGACTGGTGATATGGAATCTTGACATGTGACAAAAG  1048

seq1  AACCTTCTCTTGGCTAAGGTTTGTGAAATATTAACAGGAAAGGGATTTAG  1095
      ||||||||||||||||    |||||||||||||||| ||| || ||||||
seq2  AACCTTCTCTTGGCTA---GTTGTGAAATATTAACA-GAACGGTATTTAG  1094

seq1  AT-GTAGTTAGAGTACAGTCCGCATTACAG-TTACAGCTTAACGACTCTC  1143
      || |||||||||||||||| |||||||| | ||||||| ||   ||||||
seq2  ATCGTAGTTAGAGTACAGT-CGCATTACGGTTTACAGCCTACGAACTCTC  1143

seq1  AGATTTTCTTTGTCAAATGGA  1164
      |||  |||||| |||||||||
seq2  AGA--TTCTTTTTCAAATGGA  1162