BAC Information

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BAC

Clone NameB6Ng01-215D02
Chromosome8 (Build37)
Map Location 69,140,952 - 69,310,150
singlet/doubletdoublet
Overlap geneNpy5r, Npy1r
Upstream geneMarch1, LOC100040986, 1810029B16Rik, Tktl2
Downstream geneBC053440, LOC665453, Nat1, Nat2, LOC100041265, Nat3, Psd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215D02.bB6Ng01-215D02.g
ACCGA032235GA032236
length9621,133
definitionB6Ng01-215D02.b B6Ng01-215D02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,309,190 - 69,310,150)(69,140,952 - 69,142,077)
sequence
gaattcatcagtgtcagagataggactaacagaggcacacacacaatctg
tttggcattgagagaataccaaaggaacattggcatgacacccacgactc
ctttccaagagagaattggagagcccacaccacccacacttcccaggtgg
ctaaaaaaataaggggatcattactggatagctgagcagtttcatgatgt
ttgaaacaaagtgtccatgcctgcctttcaagattaaaaacatcaaggga
ctcgttgctaggtatttttttttaaagatttagataaattattgtacaaa
ggaagaaagaaggtggcctaattgaggagaggcagatcctggtctttcct
actgctgctgaaatgtctctgctcttggcaaagatatttttctgaaacca
ggagtgactttgcacaaaagattacataataatatggtatatatatatat
atatatatataaattcagcagagttatcactctacagttcatagaatttt
tttgaagtgtttggtgctcatgtatttttagttgtgttcacacacctttg
tgaatacaaatgtttaccagtgccccccattacagattcctgatttcatt
gccttaaaattagggaaaattctttctacgtggttttagttctaatctta
ctagagatgtcgagaatttgagagccacactttccttactgctctcaaga
gtctgtcttttgatggtatgaatcaactgtatagagtagagttgtctaag
tttgtacttcctgggggtttatgagtctcttcaatttatagattcatttt
taacagatttgaggagatttgggtcattgtttttacaccttgtttttcct
tttctcctttctctggtgacttcctgtgtatgtattagttagggttctct
aaaggaacagaacctataggataaatatatgtatttattgtgtatgtata
tatgtatgtata
gaattccttatgttttagaaataagccagcattctataaaaatatatcag
gagacttttatctagcaaacaagggagtatttcactgtataaaggcataa
tactaaaattatctttgttccttagaaatgtcagtaagctttaggatttt
gacagatggtatttagggaccaaagttagttagttagttagttagttatt
agattcatataaacataattttcccaagtgagattggagtcctgtatcat
catataataatgtgctgtgtgaaactaagtaggggaaatcaaccaaatgt
gagactgtaacaaaatggcttctgagaaatgacaatattcagcctaacag
tggctaggcgatgatcagggcaggctgtgttggacaaaacaagcgagaac
tgtacacccatcagaataagcaaataacagatttgtaaatctattttatt
ttattttcccatcgttgattgcaccctgatcctcacagactggtgattac
tgccgaggctgtcatctgtggcgtcatttgataatgaaatagacatgctg
acgctttgcaggaaggtggtctagctcagtgattcacattaagccaaaca
tgccactagctaaacaaccacactcatgccccttcatgatcaacccctcg
ccactgaaacaaaacacaagatgctgaatcacagtgcttgcccaccaaaa
atcctagttccatctgcgtctttgagctattactcatgaatcttgatgtc
atttcctttcctgatttcatcctttttctaagaagaaatgagcactacca
ggcagacataaaacattgtctcaaagctattatcttttctaaatgtaaga
caacactgttatttgatgagtctttattatttggactagaacatatcggg
aaaattgtgaaaccatagttccatcttctatgtggtttttatgcttctat
gtagagttgaagacacagctgccttttaagagcatcagtataaacaattg
tctattcattccctgcacaacccagacatcccatgtcagactgtgtaccc
acccactattggtagaagagattttggagtgactggcaatgaatggctca
ttcatttcttagactgctcgaatgatcatattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69309190_69310150
seq2: B6Ng01-215D02.b_46_1007 (reverse)

seq1  TATACATACATATATACATACAC-ATAAATACATATATTTATCCTATAGG  49
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATACATACATATATACATACACAATAAATACATATATTTATCCTATAGG  50

seq1  TTCTGTTCCTTTAGAGAACCCTAACTAATACATACACAGGAAGTCACCAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCCTTTAGAGAACCCTAACTAATACATACACAGGAAGTCACCAG  100

seq1  AGAAAGGAGAAAAGGAAAAACAAGGTGTAAAAACAATGACCCAAATCTCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAGAAAAGGAAAAACAAGGTGTAAAAACAATGACCCAAATCTCC  150

seq1  TCAAATCTGTTAAAAATGAATCTATAAATTGAAGAGACTCATAAACCCCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTGTTAAAAATGAATCTATAAATTGAAGAGACTCATAAACCCCC  200

seq1  AGGAAGTACAAACTTAGACAACTCTACTCTATACAGTTGATTCATACCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTACAAACTTAGACAACTCTACTCTATACAGTTGATTCATACCAT  250

seq1  CAAAAGACAGACTCTTGAGAGCAGTAAGGAAAGTGTGGCTCTCAAATTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGACAGACTCTTGAGAGCAGTAAGGAAAGTGTGGCTCTCAAATTCT  300

seq1  CGACATCTCTAGTAAGATTAGAACTAAAACCACGTAGAAAGAATTTTCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATCTCTAGTAAGATTAGAACTAAAACCACGTAGAAAGAATTTTCCC  350

seq1  TAATTTTAAGGCAATGAAATCAGGAATCTGTAATGGGGGGCACTGGTAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTAAGGCAATGAAATCAGGAATCTGTAATGGGGGGCACTGGTAAA  400

seq1  CATTTGTATTCACAAAGGTGTGTGAACACAACTAAAAATACATGAGCACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTATTCACAAAGGTGTGTGAACACAACTAAAAATACATGAGCACC  450

seq1  AAACACTTCAAAAAAATTCTATGAACTGTAGAGTGATAACTCTGCTGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTCAAAAAAATTCTATGAACTGTAGAGTGATAACTCTGCTGAAT  500

seq1  TTATATATATATATATATATATATACCATATTATTATGTAATCTTTTGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATATATATATATATATATACCATATTATTATGTAATCTTTTGTG  550

seq1  CAAAGTCACTCCTGGTTTCAGAAAAATATCTTTGCCAAGAGCAGAGACAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCACTCCTGGTTTCAGAAAAATATCTTTGCCAAGAGCAGAGACAT  600

seq1  TTCAGCAGCAGTAGGAAAGACCAGGATCTGCCTCTCCTCAATTAGGCCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAGCAGTAGGAAAGACCAGGATCTGCCTCTCCTCAATTAGGCCAC  650

seq1  CTTCTTTCTTCCTTTGTACAATAATTTATCTAAATCTTTAAAAAAAAATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCTTCCTTTGTACAATAATTTATCTAAATCTTTAAAAAAAAATA  700

seq1  CCTAGCAACGAGTCCCTTGATGTTTTTAATCTTGAAAGGCAGGCATGGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAACGAGTCCCTTGATGTTTTTAATCTTGAAAGGCAGGCATGGAC  750

seq1  ACTTTGTTTCAAACATCATGAAACTGCTCAGCTATCCAGTAATGATCCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTTTCAAACATCATGAAACTGCTCAGCTATCCAGTAATGATCCCC  800

seq1  TTATTTTTTTAGCCACCTGGGAAGTGTGGGTGGTGTGGGCTCTCCAATTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTAGCCACCTGGGAAGTGTGGGTGGTGTGGGCTCTCCAATTC  850

seq1  TCTCTTGGAAAGGAGTCGTGGGTGTCATGCCAATGTTCCTTTGGTATTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGAAAGGAGTCGTGGGTGTCATGCCAATGTTCCTTTGGTATTCT  900

seq1  CTCAATGCCAAACAGATTGTGTGTGTGCCTCTGTTAGTCCTATCTCTGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGCCAAACAGATTGTGTGTGTGCCTCTGTTAGTCCTATCTCTGAC  950

seq1  ACTGATGAATTC  961
      ||||||||||||
seq2  ACTGATGAATTC  962

seq1: chr8_69140952_69142077
seq2: B6Ng01-215D02.g_63_1195

seq1  GAATTCCTTATGTTTTAGAAATAAGCCAGCATTCTATAAAAATATATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATGTTTTAGAAATAAGCCAGCATTCTATAAAAATATATCAG  50

seq1  GAGACTTTTATCTAGCAAACAAGGGAGTATTTCACTGTATAAAGGCATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTTTATCTAGCAAACAAGGGAGTATTTCACTGTATAAAGGCATAA  100

seq1  TACTAAAATTATCTTTGTTCCTTAGAAATGTCAGTAAGCTTTAGGATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAATTATCTTTGTTCCTTAGAAATGTCAGTAAGCTTTAGGATTTT  150

seq1  GACAGATGGTATTTAGGGACCAAAGTTAGTTAGTTAGTTAGTTAGTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGGTATTTAGGGACCAAAGTTAGTTAGTTAGTTAGTTAGTTATT  200

seq1  AGATTCATATAAACATAATTTTCCCAAGTGAGATTGGAGTCCTGTATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCATATAAACATAATTTTCCCAAGTGAGATTGGAGTCCTGTATCAT  250

seq1  CATATAATAATGTGCTGTGTGAAACTAAGTAGGGGAAATCAACCAAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATAATGTGCTGTGTGAAACTAAGTAGGGGAAATCAACCAAATGT  300

seq1  GAGACTGTAACAAAATGGCTTCTGAGAAATGACAATATTCAGCCTAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGTAACAAAATGGCTTCTGAGAAATGACAATATTCAGCCTAACAG  350

seq1  TGGCTAGGCGATGATCAGGGCAGGCTGTGTTGGACAAAACAAGCGAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGGCGATGATCAGGGCAGGCTGTGTTGGACAAAACAAGCGAGAAC  400

seq1  TGTACACCCATCAGAATAAGCAAATAACAGATTTGTAAATCTATTTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACCCATCAGAATAAGCAAATAACAGATTTGTAAATCTATTTTATT  450

seq1  TTATTTTCCCATCGTTGATTGCACCCTGATCCTCACAGACTGGTGATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCCATCGTTGATTGCACCCTGATCCTCACAGACTGGTGATTAC  500

seq1  TGCCGAGGCTGTCATCTGTGGCGTCATTTGATAATGAAATAGACATGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGAGGCTGTCATCTGTGGCGTCATTTGATAATGAAATAGACATGCTG  550

seq1  ACGCTTTGCAGGAAGGTGGTCTAGCTCAGTGATTCACATTAAGCCAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTTGCAGGAAGGTGGTCTAGCTCAGTGATTCACATTAAGCCAAACA  600

seq1  TGCCACTAGCTAAACAACCACACTCATGCCCCTTCATGATCAACCCCTCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTAGCTAAACAACCACACTCATGCCCCTTCATGATCAACCCCTCG  650

seq1  CCACTGAAACAAAACACAAGATGCTGAATCACAGTGCTTGCCCACCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAAACAAAACACAAGATGCTGAATCACAGTGCTTGCCCACCAAAA  700

seq1  ATCCTAGTTCCATCTGCGTCTTTGAGCTATTACTCATGAATCTTGATGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGTTCCATCTGCGTCTTTGAGCTATTACTCATGAATCTTGATGTC  750

seq1  ATTTCCTTTCCTGATTTCATCCTTTTTCTAAGAAGAAATGAGCACTACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTTCCTGATTTCATCCTTTTTCTAAGAAGAAATGAGCACTACCA  800

seq1  GGCAGACATAAAACATTGTCTCAAAGCTATTATCTTTTCTAAATGTAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACATAAAACATTGTCTCAAAGCTATTATCTTTTCTAAATGTAAGA  850

seq1  CAACACTGTTATTTGATGAGTCTTTATTATTTGGACTAGAACATATCGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTGTTATTTGATGAGTCTTTATTATTTGGACTAGAACATATCGGG  900

seq1  AAAATTGTGAAAACCATAGTTCCATCTTCTATGTGGTTTTTATGCTTCTA  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTG-AAACCATAGTTCCATCTTCTATGTGGTTTTTATGCTTCTA  949

seq1  TGTAGAGTTGAAGACACAGCTGCCCTTTTAAAGAGCATCAGTATAAACCA  1000
      ||||||||||||||||||||||||  ||| ||||||||||||||||| ||
seq2  TGTAGAGTTGAAGACACAGCTGCC--TTTTAAGAGCATCAGTATAAA-CA  996

seq1  ATTGTCTATTCATTCCCTGCACAAACCCAGACATCCCCAATGTCAGAACT  1050
      |||||||||||||||||||||| ||||||||||||||  ||||||| |||
seq2  ATTGTCTATTCATTCCCTGCAC-AACCCAGACATCCC--ATGTCAG-ACT  1042

seq1  GTTGTAACCCACCCACTATTGGTAGAAGAAGATATTTTGAGAAGTGACTG  1100
      | ||| |||||||||||||||||   |||||| |||||  | ||||||||
seq2  G-TGT-ACCCACCCACTATTGGT---AGAAGAGATTTT--GGAGTGACTG  1085

seq1  GAAATGAATTGGCTCATT-----------------------TCATATTC  1126
      | |||||| |||||||||                       ||||||||
seq2  GCAATGAA-TGGCTCATTCATTTCTTAGACTGCTCGAATGATCATATTC  1133