BAC Information

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BAC

Clone NameB6Ng01-215I02
Chromosome8 (Build37)
Map Location 100,802,356 - 100,803,393
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546090, LOC636859, EG384885, LOC100041173, EG636915
Downstream geneCdh8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215I02.bB6Ng01-215I02.g
ACCGA032454GA032455
length1,0371,007
definitionB6Ng01-215I02.b B6Ng01-215I02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtccctcttctcttgagaattcagtcagtacttcttaatttca
gagccatctctttgtacctgaacacattaaaaaaaaataacctgtaagaa
tcacagggatggctataacctttggcaggattcaagagagagtagctgat
aaggtccagagggatgaagagtgtgtgtgggagggtataattgcatatca
aataaacattttaaaaatatatatgtaatagatatgtttatttaaaaatg
catttcaaaattttagatttaagaacttaatttattaaaccatatcgaga
tatcaacacttaaaaactatatcttaatattaacagttgaaatataaata
ctctcagtgaagttgtgttgtaaagaatgtcttctatgtgcagagcaacc
actccaaattctctatagatactattctattcactaataagaaactcaga
actctcaagaacagataagaatcaagaatatgaataaatgtcatataatt
ttacctagttaatgcacagagaaagcactagatggtaggaaaccaatgta
tagatcaaacacaaatatttaaggagtgacaaccctccatataataatat
tagaagcatatcttgcaggcttccccaggtctatagaatgcatagcacca
agagtctgtgctaaggtaaacaacagacattgggagacaacggtatgcag
tgtgggttcatctattggcagtcataaggcatatctgtttcctcttttca
aatttgcagtctaaagatgatgtctcctctaacaaaattaagtgtagtcc
aaatgaaattatgaagcctcagaagtctttaacataaattttaagaaggt
tatgacaatcgaagtatggtactttagaaaagacatagttatttagattt
gatatgtaatagggtactctttaaaacaaagaaaatacaggctgatggaa
ataaattataaacatattcaggcacactggaaccttatgcagttagtgaa
ggcttgagaaattccaatgcctgtcagtatgagaaaa
gaattcttcatctgcttcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcaggttcaagacccgtggaaaggcctg
tacgcttattttgtgtaccatattttctctttgctcctactctctctccc
cgctttacttctgatagcttgtcctgaatttcctctagaattttcagccc
tatcttaatcacttgataacatgtgaaaaggaacaaaagggctcctaaca
ccagaaaaaattcaaggccaaacatattccactttacttctgatagactg
tcttgaatttccttagaaagttcaagatcagacttacctcgtaaagctgt
actcactggtactctcgttccccagctgaaaagttctgaattcatacagt
tgaatccttcttaacagtctgctttacgggaacctttattaccgcgaccc
gcagttctggttctggaatgagggatcttccttgcgccagtcccgagttt
tttctcgtcccggaattcggcaccaattgttattagacgcgttctcacga
ccggccaggaaagacgcaacagaccagaatcttctgcggcaaagctttat
tgcttacatcttcaggagccagagtgcaagaagcaagagagagagaaaac
gaaaccccgtccctattaaggagaattttcctttcgcctaggacgtgtca
ctccctgattggctgcagcccatcggccgagttgacgtcacgaggaaagc
agagcacatggagtgaaggacccaccctcggcacatgcgcagattatttg
tttacacttagaacacagctgtcaggcgccatcttgtaacggcgaattgt
ggggcgcggcttctacacatccaataaaactccctgggtagaatagtgtt
tgggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_100802356_100803393
seq2: B6Ng01-215I02.b_41_1077 (reverse)

seq1  TTTTCTCATCTTGACAAGCATTGGAATTTCCTCAGGCC-TCACTAACCTG  49
      |||||||||  ||||| |||||||||||| |||| ||| ||||||| |||
seq2  TTTTCTCATACTGACAGGCATTGGAATTT-CTCAAGCCTTCACTAA-CTG  48

seq1  CCTAAAGTTCCAGTGTGCCCTGATATGTTTAT-ATTTATTTCCATCAGCC  98
      | ||| |||||||||||||   |||||||||| |||||||||||||||||
seq2  CATAAGGTTCCAGTGTGCCTGAATATGTTTATAATTTATTTCCATCAGCC  98

seq1  TGTAATTTTCTTTGTTTT-AAGAGTACCTATTTACATATCAAATCTAAAT  147
      ||| |||||||||||||| |||||||||   |||||||||||||||||||
seq2  TGT-ATTTTCTTTGTTTTAAAGAGTACCCTATTACATATCAAATCTAAAT  147

seq1  AAACTATGTCTTTTCTAAAGTACCCTACTTCGATTGTCATAACTTTC-TA  196
       ||||||||||||||||||||||| |||||||||||||||||| ||| ||
seq2  -AACTATGTCTTTTCTAAAGTACCATACTTCGATTGTCATAACCTTCTTA  196

seq1  AAATTTATGTTAAAGACTTCTGAGGCCTTCATAATTTCATTTGGACTACA  246
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAATTTATGTTAAAGACTTCTGAGG-CTTCATAATTTCATTTGGACTACA  245

seq1  CTTAATTTTGTTAGAGGAGACATCATCTTTAGACTGCAAATTTGAAAAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTTTGTTAGAGGAGACATCATCTTTAGACTGCAAATTTGAAAAGA  295

seq1  GGAAACAGATATGCCTTATGACTGCCAATAGATGAACCCACACTGCATAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGATATGCCTTATGACTGCCAATAGATGAACCCACACTGCATAC  345

seq1  CGTTGTCTCCCAATGTCTGTTGTTTACCTTAGCACAGACTCTTGGTGCTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTCTCCCAATGTCTGTTGTTTACCTTAGCACAGACTCTTGGTGCTA  395

seq1  TGCATTCTATAGACCTGGGGAAGCCTGCAAGATATGCTTCTAATATTATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTATAGACCTGGGGAAGCCTGCAAGATATGCTTCTAATATTATT  445

seq1  ATATGGAGGGTTGTCACTCCTTAAATATTTGTGTTTGATCTATACATTGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAGGGTTGTCACTCCTTAAATATTTGTGTTTGATCTATACATTGG  495

seq1  TTTCCTACCATCTAGTGCTTTCTCTGTGCATTAACTAGGTAAAATTATAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTACCATCTAGTGCTTTCTCTGTGCATTAACTAGGTAAAATTATAT  545

seq1  GACATTTATTCATATTCTTGATTCTTATCTGTTCTTGAGAGTTCTGAGTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTATTCATATTCTTGATTCTTATCTGTTCTTGAGAGTTCTGAGTT  595

seq1  TCTTATTAGTGAATAGAATAGTATCTATAGAGAATTTGGAGTGGTTGCTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTAGTGAATAGAATAGTATCTATAGAGAATTTGGAGTGGTTGCTC  645

seq1  TGCACATAGAAGACATTCTTTACAACACAACTTCACTGAGAGTATTTATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATAGAAGACATTCTTTACAACACAACTTCACTGAGAGTATTTATA  695

seq1  TTTCAACTGTTAATATTAAGATATAGTTTTTAAGTGTTGATATCTCGATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTGTTAATATTAAGATATAGTTTTTAAGTGTTGATATCTCGATA  745

seq1  TGGTTTAATAAATTAAGTTCTTAAATCTAAAATTTTGAAATGCATTTTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAATAAATTAAGTTCTTAAATCTAAAATTTTGAAATGCATTTTTA  795

seq1  AATAAACATATCTATTACATATATATTTTTAAAATGTTTATTTGATATGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACATATCTATTACATATATATTTTTAAAATGTTTATTTGATATGC  845

seq1  AATTATACCCTCCCACACACACTCTTCATCCCTCTGGACCTTATCAGCTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATACCCTCCCACACACACTCTTCATCCCTCTGGACCTTATCAGCTA  895

seq1  CTCTCTCTTGAATCCTGCCAAAGGTTATAGCCATCCCTGTGATTCTTACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTGAATCCTGCCAAAGGTTATAGCCATCCCTGTGATTCTTACA  945

seq1  GGTTATTTTTTTTTAATGTGTTCAGGTACAAAGAGATGGCTCTGAAATTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTTTTTTTTAATGTGTTCAGGTACAAAGAGATGGCTCTGAAATTA  995

seq1  AGAAGTACTGACTGAATTCTCAAGAGAAGAGGGACTGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTACTGACTGAATTCTCAAGAGAAGAGGGACTGAATTC  1037