BAC Information

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BAC

Clone NameB6Ng01-215K08
Chromosome8 (Build37)10 (Build37)
Map Location 24,379,355 - 24,379,98343,379,065 - 43,380,106
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneTpte, Slc25a15, LOC547006, Mrps31, AI316807, Slc20a2, LOC100040803, Vdac3, Dkk4, Polb, Ikbkb, Plat, Ap3m2, Myst3, LOC100042253, Ank1, Nkx6-3, Agpat6, Gins4, Golga7
Downstream geneSfrp1, LOC100040931, Zmat4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215K08.bB6Ng01-215K08.g
ACCGA032549GA032550
length1,0731,045
definitionB6Ng01-215K08.b B6Ng01-215K08.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(24,379,355 - 24,379,983)(43,379,065 - 43,380,106)
sequence
gaattccccttaaagagatagcctctctggccatctatcccttgcttcag
ggaagatgagtggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgtgttttgtgtttggcacatgtgttaggtgcagagtgtgtgggtccg
cactttcgccatggtagcgtaggcttttgctgcagtggaggcgggacaat
ctcctcagattcggtttgccgctctaaaagaaattatgctgcgttatgcc
gtggggtgcgaggctaagcactgcacagaggatagcttgctgttggcatc
ctgtggaaggcacgtctgattgcatgaaggttcagtgtcctagttccctt
cccccaggaaaaatgacacgggagctggccaagacctctctgggtgatga
gcctaagggatggttttgtgtagggcccctatgcttgcacactggggatc
agacctctaccttcacccatgaggcttgcttgcagcaattaagagctggc
catagattaatcagcatcctggccctttgatgcacctgccgcaagcaaaa
cacaatctccccaggagtggcttggcatgactgagaggtagtcagtgatt
agactccctgggcatgtcaccaacctaagacagggatcaaaccaatgctg
tttgtcacccaaggacgggtaaggggcatggctgcggggggctatctaca
gacattctctctgccaaaaaagaaaaaagggggaattgtggggagcgggt
gtggcggcagtcccaaaggcgccagggactgcagctaagtcatatgactt
gcacctgacttcctcatataagacacaaacatcttgagagctgcacaggt
gtaccaggatacaggtgaatccattttgatggagatattgcccctgctgc
cctgattagctgaagccttcgtgactggcgagggggcgtggcctgctgtg
cgtggatgagagagagtataaaaagaagtgagaggcccagggtcggggga
gatataaaacaggagatataaactatggagatataaacaaggagatataa
aacaaggagatataaacaaggga
gaattcccaaaggagagggactgaatgctcactggtcgttcactgccaag
ccccaccatgccatactgttggtctttcagagcgaagcaaacgtagctcc
tttttgtatacctctggctttgacctcttcattttccggcctgagtttca
gtgaatactggaggtggaaaggccaaatgagcctgaagcttgtcctactc
acagatctgcctgtctgcagtcactttgaagtaagtcactctttaacacc
ctcctgagttcaggtggtagataggaaagaggaaagcatttggggagtgc
cagagcagtgggcttaggaagggtgttctagtgaaagattcaaggtttgt
ggtgtttttttgtttgtttgtttgtttttttttttcttttgcaattgtaa
ggctgatttgagcagagttaagggaatttggaagataagaaataggttga
aagtagttaatcccactactgctttaccagttcttcaggaggtgtgagca
aatgcctgttcactaacagacggaggtgtagttctacccaggtccataca
tttatagggcttacttaccagacccccaggagggatggacttagaggagc
aagaatgagccccaagcaactgtttggctgccaagcccatcgtgtcttcc
catccctcttcagataaacttccatgtcctgtgaactcaaacagttccca
gattgcttgtagttgggggtgtgcaggagggaagaatggctgtggcttga
gatgtgagtcctgagaccctcctctctttcttccctgggaagtgtcagtg
actgcatttacttttactataggcctagctacctctgtacttttctcacc
tagttgccatggctacatggccatagtcaatatcttcaccaggaggatga
cagtgtgaatgggctttggtgctgagaaagaaaggctatacttatattgt
cgtttgaaagatttctgtatttccttttatctgtcctgggttttactggc
tatagggctaatttatggttttgttggtttcttttgcaaggatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_24379355_24379983
seq2: B6Ng01-215K08.b_625_1115

seq1  GAGAGGTAGTCAGTGATAAGACTCCCTGGGCATGTCACCAACCTAAGACA  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAGAGGTAGTCAGTGATTAGACTCCCTGGGCATGTCACCAACCTAAGACA  50

seq1  GGGATCAAACCAATGCTGTTTGTCACCCAAGGACGGGTAAGGGGCATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCAAACCAATGCTGTTTGTCACCCAAGGACGGGTAAGGGGCATGGC  100

seq1  TGCGGGGGGCTATCTACAGACATTCTCTCTGCCAAAAAAGAAAAAAGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGGGGGCTATCTACAGACATTCTCTCTGCCAAAAAAGAAAAAAGGGG  150

seq1  GAATTGTGGGGAGCGGGTGTGGCGGCAGTCCCAAAGGCGCCAGGGACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTGGGGAGCGGGTGTGGCGGCAGTCCCAAAGGCGCCAGGGACTGC  200

seq1  AGCTAAGTCATATGACTTGCACCTGACTTCCTCATATAAGACACAAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGTCATATGACTTGCACCTGACTTCCTCATATAAGACACAAACAT  250

seq1  CTTGAGTGTTGCGCAGGTGTACCAGGATACAGGTGAATCCAATTTGGTGG  300
      |||||| | ||| |||||||||||||||||||||||||||| |||| |||
seq2  CTTGAGAGCTGCACAGGTGTACCAGGATACAGGTGAATCCATTTTGATGG  300

seq1  AGAT-TTGCCCCTGCTGCCCTGATTAGCTGAAG-CTGCGTGCCTGGTGAG  348
      |||| |||||||||||||||||||||||||||| || |||| |||| |||
seq2  AGATATTGCCCCTGCTGCCCTGATTAGCTGAAGCCTTCGTGACTGGCGAG  350

seq1  GTGGCGTGGCCTGCTGTGCGTGGATGGGAACTGAGAGTATAAGA--GAGT  396
      | |||||||||||||||||||||||| ||   |||||||||| |   |||
seq2  GGGGCGTGGCCTGCTGTGCGTGGATGAGA---GAGAGTATAAAAAGAAGT  397

seq1  GAGAGGCCCAGGGTTCAAGAGAGATATAAAAACAAGGGAGATATAAACAG  446
      ||||||||||||| ||  | ||||||| ||||||  ||||||||||||  
seq2  GAGAGGCCCAGGG-TCGGGGGAGATAT-AAAACA--GGAGATATAAACTA  443

seq1  GGGAGATATAAAAACAAGGGAGATATAAACAGGGGAGATATAAACAAGGG  496
       ||||||||  |||||| |||||||||||    |||||||||||||||||
seq2  TGGAGATAT--AAACAA-GGAGATATAAAACAAGGAGATATAAACAAGGG  490

seq1  AGATATAAACAAGGGAGATAGATATAAACAAGGAAGATATAAACAAGGGA  546
      |                                                 
seq2  A-------------------------------------------------  491

seq1  GATATAAAAACAAGGGAGATATATAAACAAGGGAGATATAAAAACAAGGG  596
                                                        
seq2  --------------------------------------------------  491

seq1  AGATATAAAAACAAGGGAGATATAAACAAGGGA  629
                                       
seq2  ---------------------------------  491

seq1: chr10_43379065_43380106
seq2: B6Ng01-215K08.g_67_1111

seq1  GAATTCCCAAAGGAGAGGGACTGAATGCTCACTGGTCGTTCACTGCCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAAGGAGAGGGACTGAATGCTCACTGGTCGTTCACTGCCAAG  50

seq1  CCCCACCATGCCATACTGTTGGTCTTTCAGAGCGAAGCAAACGTAGCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCATGCCATACTGTTGGTCTTTCAGAGCGAAGCAAACGTAGCTCC  100

seq1  TTTTTGTATACCTCTGGCTTTGACCTCTTCATTTTCCGGCCTGAGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTATACCTCTGGCTTTGACCTCTTCATTTTCCGGCCTGAGTTTCA  150

seq1  GTGAATACTGGAGGTGGAAAGGCCAAATGAGCCTGAAGCTTGTCCTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATACTGGAGGTGGAAAGGCCAAATGAGCCTGAAGCTTGTCCTACTC  200

seq1  ACAGATCTGCCTGTCTGCAGTCACTTTGAAGTAAGTCACTCTTTAACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTGCCTGTCTGCAGTCACTTTGAAGTAAGTCACTCTTTAACACC  250

seq1  CTCCTGAGTTCAGGTGGTAGATAGGAAAGAGGAAAGCATTTGGGGAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAGTTCAGGTGGTAGATAGGAAAGAGGAAAGCATTTGGGGAGTGC  300

seq1  CAGAGCAGTGGGCTTAGGAAGGGTGTTCTAGTGAAAGATTCAAGGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAGTGGGCTTAGGAAGGGTGTTCTAGTGAAAGATTCAAGGTTTGT  350

seq1  GGTGTTTTTTTGTTTGTTTGTTTGTTTTTTTTTTTCTTTTGCAATTGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTTTTGTTTGTTTGTTTGTTTTTTTTTTTCTTTTGCAATTGTAA  400

seq1  GGCTGATTTGAGCAGAGTTAAGGGAATTTGGAAGATAAGAAATAGGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATTTGAGCAGAGTTAAGGGAATTTGGAAGATAAGAAATAGGTTGA  450

seq1  AAGTAGTTAATCCCACTACTGCTTTACCAGTTCTTCAGGAGGTGTGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTTAATCCCACTACTGCTTTACCAGTTCTTCAGGAGGTGTGAGCA  500

seq1  AATGCCTGTTCACTAACAGACGGAGGTGTAGTTCTACCCAGGTCCATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTGTTCACTAACAGACGGAGGTGTAGTTCTACCCAGGTCCATACA  550

seq1  TTTATAGGGCTTACTTACCAGACCCCCAGGAGGGATGGACTTAGAGGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGGGCTTACTTACCAGACCCCCAGGAGGGATGGACTTAGAGGAGC  600

seq1  AAGAATGAGCCCCAAGCAACTGTTTGGCTGCCAAGCCCATCGTGTCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAGCCCCAAGCAACTGTTTGGCTGCCAAGCCCATCGTGTCTTCC  650

seq1  CATCCCTCTTCAGATAAACTTCCATGTCCTGTGAACTCAAACAGTTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTCTTCAGATAAACTTCCATGTCCTGTGAACTCAAACAGTTCCCA  700

seq1  GATTGCTTGTAGTTGGGGGTGTGCAGGAGGGAAGAATGGCTGTGGCTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTTGTAGTTGGGGGTGTGCAGGAGGGAAGAATGGCTGTGGCTTGA  750

seq1  GATGTGAGTCCTGAGACCCTCCTCTCTTTCTTCCCCTGGGAAGTGTCAGT  800
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GATGTGAGTCCTGAGACCCTCCTCTCTTTCTT-CCCTGGGAAGTGTCAGT  799

seq1  GACTGCA-TTACTTTTACTATAGGCCTAGCTACCTCTGTACTTTTCTCAC  849
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCATTTACTTTTACTATAGGCCTAGCTACCTCTGTACTTTTCTCAC  849

seq1  CTAGTTGCCATGGCTACATGGCCATAGTC-ATATCTTCACCAGGAGGATG  898
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTAGTTGCCATGGCTACATGGCCATAGTCAATATCTTCACCAGGAGGATG  899

seq1  ACAGTGTGAATGGGCTTT-GTGCTGAGAAAAGAAGGCTATAC-TATATTG  946
      |||||||||||||||||| |||||||||||  |||||||||| |||||||
seq2  ACAGTGTGAATGGGCTTTGGTGCTGAGAAAGAAAGGCTATACTTATATTG  949

seq1  TCGTTTGAAAGATTTCTGTATTTCCTTTTATCTGTCCTGTGTTTTACT-G  995
      ||||||||||||||||||||||||||||||||||||||| |||||||| |
seq2  TCGTTTGAAAGATTTCTGTATTTCCTTTTATCTGTCCTGGGTTTTACTGG  999

seq1  CTATAGGGCTAATTTTATGTTTTGTTTGTTTTCTTTTGCAAGGATCT  1042
      |||||||||||| |||||| |||  ||| ||||||||||||||||||
seq2  CTATAGGGCTAA-TTTATGGTTTTGTTGGTTTCTTTTGCAAGGATCT  1045