BAC Information

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BAC

Clone NameB6Ng01-215P16
Chromosome8 (Build37)
Map Location 99,977,034 - 100,065,076
singlet/doubletdoublet
Overlap geneLOC546090
Upstream geneLOC333331
Downstream geneLOC636859, EG384885, LOC100041173, EG636915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215P16.bB6Ng01-215P16.g
ACCGA032793GA032794
length1,1291,138
definitionB6Ng01-215P16.b B6Ng01-215P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,063,935 - 100,065,076)(99,977,034 - 99,978,156)
sequence
gaattcatttcattatgttttctctggatcttttaattcatttctttatc
ctcctctcttttattctttcttctaggcatccctttctatcttctgctat
ttaaatgtatatctctgacaaataagtaaccagtgggagtaagggagata
tctatgtaggacacaaagcaaccgtgcaagttttgagggacacctacaaa
gaggaatgtaatgttcaagtgttggtagacataggaaggagaggcaagaa
cagcaagccaggaaatcagaagtcaaatcattcttggataggattcattt
gagacagtagtaactagtaacagaaatgtaataaggtattaaagcacaaa
cactagagaaagtgtcacagacatggttgtcctaaactgtatcaaataat
caaagcaactatttttaaattgagagttgctaaaattatacattatttac
taacaataacaaaaatcaggaccatggatgcttgactttaatcccacctc
tcctggaaggtgaggcagaagattataaatccatagtccatatggcctac
aaagaaagttcaaggctagcctgggcaacatagtgatattctgtctcaaa
atcaaaaggacaaaaggggttgaaagtcatctcagtggtttgatgcttta
actagaatgcatgaatttaatcctcactacaagtagaaacgcaccatcaa
tgacaaatgaacagcactgttcctgtcactcttcactccaaaagtattgc
aatatatccatctaaaacattcagataaaattcaagggaattctataaca
tgcttgccctataatctaaaatgatgaaaagttttgaaagtcaggcaaag
aacagggaatcatacaaatgaaagagattaaacagagatgacaacgacag
gcagtatttgattcagagctgatcaacttactataaaaacattagtttgg
gcttaggggagactaatattagtaatactttctgcttttatggctatgtt
gtagttaatgtaagataaatcatgttgtagatatacaccggttgcattat
tgacaacaatctcagaatggtccagaaatggagttgtactgctctgcact
gttagtaactgaattgcttcccagtattt

gaattctttgttcagttctgagcaccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagattctttcccaatctgttggtggtct
ttttgtcttattgaaggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgttaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttccgtgtctctggtttgtctctccattttttaa
ttcatccttatttcatcctaaatgtgatagaatattaaaaaaaactgttt
gattttcaaattgcctggtgaatgtaatgtcaagcttatggaacacatca
gaatttgaagagaaaaaacaggctactgactaaaagaatataagttttca
acttggatctggccatgttaaatgttcatataataaacatatatgttata
cctccaataaacatatgcatttattatataatagatggtgtatgccattg
tatagtatggcatattgatactataactaataaaacctgtcgtttactga
tccagaagtggtggaacctgggagaatggagccaatgaatgaggtcgacg
aaagtcttatgcaataggcaactttatttagagtttcagaaaatgtatac
tctgggaattaagaggtgtcacatgaaataaagggtataatcgctaaggt
aagcctcagatagaaggcaagctgcattatggcagcaaaaacatttgttc
atagaggcatatgtatataaaagaatagccagttgtcatgaataatctga
tgtaaatgtactcctatctgctacccacggaggaagtagagactgcttgt
gggcttgcttgtttagtctctgagttcaatatgagcctttgctcagtttg
atttaaaagaactgtttctctggtgcccttcaaacctctttggctcttac
attcttttctactttctctttgccctctcctacaggttaccttaggaact
actgagccagagagattttattgatgataagtcattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_100063935_100065076
seq2: B6Ng01-215P16.b_43_1171 (reverse)

seq1  AAATATTGGGAAGCAATTTCAAGTTTACCTAAACAGTGCAAGAGCAGTAC  50
      ||||| |||||||||| ||||   ||||   |||||||| ||||||||||
seq2  AAATACTGGGAAGCAA-TTCA--GTTAC--TAACAGTGC-AGAGCAGTAC  44

seq1  AACTTCCCTTTCTTGAACCATCTGAGAATTTGTTGTCAAT-ATACAACC-  98
      ||| ||| ||||| || |  |||||||  ||||||||||| || ||||| 
seq2  AAC-TCCATTTCTGGACCATTCTGAGA--TTGTTGTCAATAATGCAACCG  91

seq1  GTGTAATATCTACAACATGGAATTTATCTTACATTAACTACAACATAGCC  148
      |||| ||||||||||||||  |||||||||||||||||||||||||||||
seq2  GTGT-ATATCTACAACATG--ATTTATCTTACATTAACTACAACATAGCC  138

seq1  ATTAAAAGCAGAAAGTTATTACTAATATTAGTCTTCCCTAAGCCCAAACT  198
      | ||||||||||||| |||||||||||||||||| |||||||||||||||
seq2  A-TAAAAGCAGAAAG-TATTACTAATATTAGTCTCCCCTAAGCCCAAACT  186

seq1  AATGTTTTTATAGTAAGTTGATCAGCTCTGAATCAAATACTGCCTGTCGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTTATAGTAAGTTGATCAGCTCTGAATCAAATACTGCCTGTCGT  236

seq1  TGTCATCTCTGTTTAATCTCTTTCATTTTGTATGATTCCCTGTTCTTTGC  298
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTCATCTCTGTTTAATCTCTTTCA-TTTGTATGATTCCCTGTTCTTTGC  285

seq1  CTGACTTTCAAAACTTTTCATCATTTTAGATTATAGGGCAAGCATGTTAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTTCAAAACTTTTCATCATTTTAGATTATAGGGCAAGCATGTTAT  335

seq1  AGAATTCCCTTGAATTTTATCTGAATGTTTTAGATGGATATATTGCAATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCCCTTGAATTTTATCTGAATGTTTTAGATGGATATATTGCAATA  385

seq1  CTTTTGGAGTGAAGAGTGACAGGAACAGTGCTGTTCATTTGTCATTGATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGAGTGAAGAGTGACAGGAACAGTGCTGTTCATTTGTCATTGATG  435

seq1  GTGCGTTTCTACTTGTAGTGAGGATTAAATTCATGCATTCTAGTTAAAGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTTTCTACTTGTAGTGAGGATTAAATTCATGCATTCTAGTTAAAGC  485

seq1  ATCAAACCACTGAGATGACTTTCAACCCCTTTTGTCCTTTTGATTTTGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACCACTGAGATGACTTTCAACCCCTTTTGTCCTTTTGATTTTGAG  535

seq1  ACAGAATATCACTATGTTGCCCAGGCTAGCCTTGAACTTTCTTTGTAGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATATCACTATGTTGCCCAGGCTAGCCTTGAACTTTCTTTGTAGGC  585

seq1  CATATGGACTATGGATTTATAATCTTCTGCCTCACCTTCCAGGAGAGGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGACTATGGATTTATAATCTTCTGCCTCACCTTCCAGGAGAGGTG  635

seq1  GGATTAAAGTCAAGCATCCATGGTCCTGATTTTTGTTATTGTTAGTAAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAGTCAAGCATCCATGGTCCTGATTTTTGTTATTGTTAGTAAAT  685

seq1  AATGTATAATTTTAGCAACTCTCAATTTAAAAATAGTTGCTTTGATTATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATAATTTTAGCAACTCTCAATTTAAAAATAGTTGCTTTGATTATT  735

seq1  TGATACAGTTTAGGACAACCATGTCTGTGACACTTTCTCTAGTGTTTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAGTTTAGGACAACCATGTCTGTGACACTTTCTCTAGTGTTTGTG  785

seq1  CTTTAATACCTTATTACATTTCTGTTACTAGTTACTACTGTCTCAAATGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATACCTTATTACATTTCTGTTACTAGTTACTACTGTCTCAAATGA  835

seq1  ATCCTATCCAAGAATGATTTGACTTCTGATTTCCTGGCTTGCTGTTCTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATCCAAGAATGATTTGACTTCTGATTTCCTGGCTTGCTGTTCTTG  885

seq1  CCTCTCCTTCCTATGTCTACCAACACTTGAACATTACATTCCTCTTTGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTTCCTATGTCTACCAACACTTGAACATTACATTCCTCTTTGTA  935

seq1  GGTGTCCCTCAAAACTTGCACGGTTGCTTTGTGTCCTACATAGATATCTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCCTCAAAACTTGCACGGTTGCTTTGTGTCCTACATAGATATCTC  985

seq1  CCTTACTCCCACTGGTTACTTATTTGTCAGAGATATACATTTAAATAGCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTCCCACTGGTTACTTATTTGTCAGAGATATACATTTAAATAGCA  1035

seq1  GAAGATAGAAAGGGATGCCTAGAAGAAAGAATAAAAGAGAGGAGGATAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAGAAAGGGATGCCTAGAAGAAAGAATAAAAGAGAGGAGGATAAA  1085

seq1  GAAATGAATTAAAAGATCCAGAGAAAACATAATGAAATGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAATTAAAAGATCCAGAGAAAACATAATGAAATGAATTC  1129


seq1: chr8_99977034_99978156
seq2: B6Ng01-215P16.g_65_1202

seq1  GAATTCTTTGTTCAGTTCTGAGCACCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCACCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATTCTTTCCCAATCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATTCTTTCCCAATCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATTGAAGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGAAGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200

seq1  TTAGGTCCCATTTGTTAATTCTCGATCTTACAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCCCATTTGTTAATTCTCGATCTTACAGCACAAGCCATTGCTGTT  250

seq1  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC  300

seq1  TTTCTCCTCTATAAGTTTCCGTGTCTCTGGTTTGTCTCTCCATTTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTATAAGTTTCCGTGTCTCTGGTTTGTCTCTCCATTTTTTAA  350

seq1  TTCATCCTTATTTCATCCTAAATGTGATAGAATATTAAAAAAAACTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTTATTTCATCCTAAATGTGATAGAATATTAAAAAAAACTGTTT  400

seq1  GATTTTCAAATTGCCTGGTGAATGTAATGTCAAGCTTATGGAACACATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCAAATTGCCTGGTGAATGTAATGTCAAGCTTATGGAACACATCA  450

seq1  GAATTTGAAGAGAAAAAACAGGCTACTGACTAAAAGAATATAAGTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAAGAGAAAAAACAGGCTACTGACTAAAAGAATATAAGTTTTCA  500

seq1  ACTTGGATCTGGCCATGTTAAATGTTCATATAATAAACATATATGTTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATCTGGCCATGTTAAATGTTCATATAATAAACATATATGTTATA  550

seq1  CCTCCAATAAACATATGCATTTATTATATAATAGATGGTGTATGCCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAATAAACATATGCATTTATTATATAATAGATGGTGTATGCCATTG  600

seq1  TATAGTATGGCATATTGATACTATAACTAATAAAACCTGTCGTTTACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTATGGCATATTGATACTATAACTAATAAAACCTGTCGTTTACTGA  650

seq1  TCCAGAAGTGGTGGAACCTGGGAGAATGGAGCCAATGAATGAGGTCGACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGTGGTGGAACCTGGGAGAATGGAGCCAATGAATGAGGTCGACG  700

seq1  AAAGTCTTATGCAATAGGCAACTTTATTTAGAGTTTCAGAAAATGTATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTATGCAATAGGCAACTTTATTTAGAGTTTCAGAAAATGTATAC  750

seq1  TCTGGGAATTAAGAGGTGTCACATG-AATAAAGGGTATAATCGCTAAGGT  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTGGGAATTAAGAGGTGTCACATGAAATAAAGGGTATAATCGCTAAGGT  800

seq1  AAGCCTCAGATAGAAGGCAAGCTGCA-TATGGCAGCAAAAACATTTGTTC  848
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAGCCTCAGATAGAAGGCAAGCTGCATTATGGCAGCAAAAACATTTGTTC  850

seq1  ATAGAGGCATATGTATATAAAAAGAATAGCCAGTTGTCATGAATAATCTG  898
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATAGAGGCATATGTATAT-AAAAGAATAGCCAGTTGTCATGAATAATCTG  899

seq1  ATGTAAATGTACTCCTATCTGCTA-CCAC-GAGGAGGTAGAGACTGC-TG  945
      |||||||||||||||||||||||| |||| ||||| ||||||||||| ||
seq2  ATGTAAATGTACTCCTATCTGCTACCCACGGAGGAAGTAGAGACTGCTTG  949

seq1  TTGGCTTGCTTGTTTAGTCTCTGAGTTC-ATATGAG-CTTTGCTCAG-TT  992
      | |||||||||||||||||||||||||| ||||||| |||||||||| ||
seq2  TGGGCTTGCTTGTTTAGTCTCTGAGTTCAATATGAGCCTTTGCTCAGTTT  999

seq1  GATTT-AGAGAACCTTGTTTCTCTGGTG-CCTTCAAACCTCTTTGGCTCT  1040
      ||||| | |||||  ||||||||||||| |||||||||||||||||||||
seq2  GATTTAAAAGAAC--TGTTTCTCTGGTGCCCTTCAAACCTCTTTGGCTCT  1047

seq1  TACATTC-TTTCTACCTTCTCTT--GCCTCTCCTACAGGGTACCT--AGA  1085
      ||||||| ||||||| |||||||   ||||||||||||| |||||   ||
seq2  TACATTCTTTTCTACTTTCTCTTTGCCCTCTCCTACAGGTTACCTTAGGA  1097

seq1  AC-ACTGAG-CAGAGAGATTTTA-TGATGATAATCCATTTA  1123
      || |||||| ||||||||||||| |||||||||  ||||||
seq2  ACTACTGAGCCAGAGAGATTTTATTGATGATAAGTCATTTA  1138


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